Oncorhynchus mykiss (rainbow trout): 110527996
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Entry
110527996 CDS
T07259
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 3 isoform X1
KO
K03260
translation initiation factor 4G
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110527996
03012 Translation factors [BR:
omy03012
]
110527996
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110527996
mRNA cycle factors
Stress granule specific factors
110527996
Translation factors [BR:
omy03012
]
Eukaryotic type
Initiation factors
eIF-4
110527996
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
W2
PP_kinase
Motif
Other DBs
NCBI-GeneID:
110527996
NCBI-ProteinID:
XP_021465405
Ensembl:
ENSOMYG00000026700
LinkDB
All DBs
Position
7:complement(53636783..53703957)
Genome browser
AA seq
1815 aa
AA seq
DB search
MSLPTKIVQKPATVAVSGPGTVPSPSSQLRATLTSVSLPPGAPGAPQSNAVPPPQIFLNM
TRPRIPRVQPSLDDRIFPTQPGVTAVYSVPRHPGPPYTAHDITKGHPNLAGTPPGHAHSP
ALSQVSVPTASPYRYPKGWEAGGGSPYTTGQNAGSTPLVYSPQTQQMNAQPQSRPSSMPS
PSPSPSPPVIWNHQFATGPRPTHHQGGFRPIQFFQRAQMQTARPTIPTNTSSLRPGSQNP
TAAVYPPNQPTMMMMAPMPFPSPQAAQYYIPQYRHSTPYVGPPQPFSVQPPGSGTFYPGP
GPGEYPAQYAPGPQFYPGQQVYPPSPPIIVPTPQQPPPAKREKKPSSQIRIRDPNQGGRD
ITEEIMAGGTGSRNPTPPVGRPSSTPTPPQFLWPHPHYPHIFYLKSQQQQPSGSQTPEQG
QGQAHPAYSLEPPKQQQPTPGAADSKPGPVYDKPKLEPVIRKPSSPGIGQPEPSMAWQEA
SAPVTAPSPPVEKELPSPAPVMVAPITAPRPVASPNPIEQPSAVEPATPTPSAAEPKTLP
PTTHSQTPNTVEPLPEAPHTLAASPTLTPKALNGHADTGAELDTQAQEPSPLDPSPSPPQ
PQASTPAFREDCSEAVPSEVRAEIPPAVTGSIAPITVVPVTLTSKPAPAFPAPPPGLPPL
VQATAEASKPADTKDVPLKAGTEAFITPDNKPEPQLQALSRKSPTTGCQAAPDAPKTWKK
PNEESPVGDAQQRETEEELKPLEEAAGDQALPPARSCSTSPPPSAAPSALEAEERPPAPE
ENGEAEPMRNGAGHTSETESSDSGATPGDNEGSTGAPPDLFQDDLETNGKRQYKRDFLLG
FQFMAACTQKPDGLPQISDVVLDKINQNKLPTRAVESRVISRGPDFTPAFADFGRQMSGG
RGGAAVSHTHSQAHQMMNMGGGARRPPPRKIILNVSANEEVQLKKAENAWKPGMKRAGPS
DDPEVITTQELFRKVRSILNKLTPQMFNQLMKQVTDLTIDTEERLKGVIDLVFEKAIDEP
GFSVAYGNMCRCLTTLKVPMTDKPGTTVNFRKLLLNRCQKEFERDKVDDVVFERKQKELD
SAQSSDQERLRLELEEAKDKARRRSIGNIKFIGELFKLKMLTEAIMHDCVVKLLKNHDEE
SLECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVIDLRLHNW
VSRRADQGPKTIEQIHKEAKIEEQEEQRKVHQQLLSKDTKRRPEQQQQQREQQREQQREQ
RVQQRDETWNTVPMTKNSRTIDPTKIPKISKPQMDEKIQLGPRASLNWMKGSSGGAKASD
SELSRSGGGGASLNRYSALQSTQSHQTTPPAQNLEYDTRRTLGSRSSAGRERSEKPLSPA
PSRPGSFVRGGSAKELLESPALSPEEPRRELESPSVSEDKTGPERSSAREPVKAEPVVAQ
SPDRPALSEEEMERKSRAIIDEFLHINDYKEAVQCVDELDMSSQLHVFVRVGVESTLERS
QITRDHMGKLLFQLVQQDILARSQFFKGFADTLELADDMAIDIPHIWLYLAELLSPVLRD
RGFSMRELFSELSKPLLPVGRAGILFSEILHILCKQMSHRKVGTLWRESGLSWSDFLPEG
EDVQDFISEQKLQFTEADCSSHEAALATTALSLVVLNQQLERLLLEDMASDEQIFDWVEA
NLDESQMSSSPFLRALMTAVCKAAVKDESASCRVDVAIIQRRLPVLLKYLNSDTERQLQA
LYALQALIVTLDQPPNLLRMFFDCLYDEDVISEDAFYKWETSKDPAEELGKGVALKSVTA
FFTWLREAEEESEDN
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccgacgaaaatagtccaaaaacccgccactgtcgcagtaagtggacctgga
actgtcccgtctccgtcgagccaactgcgggctaccctgacctccgtgtctttaccaccg
ggagccccaggtgctcctcagtcgaacgccgtgccgccacctcaaattttccttaatatg
acgcgtcccaggatccctcgggttcagccatccctggatgaccgcatcttccccacacag
cccggcgtcactgccgtctacagcgtaccgaggcaccctggtcctccctacacggctcat
gacatcacaaagggacaccctaacttggcgggcacaccgccagggcatgcccactcaccg
gcgctctctcaggtatcagtacccacagcttccccatatcgctaccctaagggctgggag
gcaggcggagggtctccatacaccactggacagaatgctggctccacacctctagtgtat
tctcctcagacccagcaaatgaatgcacaaccacagagtcgcccgtcatccatgcccagc
cccagccccagccccagcccccctgtcatatggaaccaccagtttgcgacgggccctcga
ccaacccaccatcagggaggattcaggcccatccagtttttccagagggctcagatgcag
acagcgcggccaaccatccccaccaacacttcatctctgcggcccggctctcagaacccc
acagcggcggtatacccccccaaccagcccaccatgatgatgatggcccccatgcccttc
ccctccccacaggctgcccagtactacatcccacagtatcgccacagtacgccctatgtg
gggccgccccagccgttttcagtgcagccgccggggtctggcaccttctatcctggccct
gggccgggggagtaccctgctcagtatgctcccggacctcaattctatccaggacagcag
gtgtaccccccctcaccccccatcatagtgcctacaccgcagcaacctccaccagccaag
cgtgagaagaaaccatcctcccagatccgtatccgtgaccccaatcagggaggcagggac
atcacagaggagatcatggcagggggcacagggagccggaatccaactccccctgtcgga
cgaccctcctccacccccacccctccgcagtttttatggccgcaccctcattatcctcac
attttctacctcaaatcgcagcagcagcagccgagcggcagccagactccggagcagggc
caaggccaggcccacccagcctacagcctggagccccccaagcagcagcagcccacgcct
ggggctgcagacagcaaaccagggccagtatatgataagccaaaattggagccggttatc
cggaagccttcctctcccgggattggacaaccagaaccttctatggcgtggcaagaggcc
agtgcacctgtaactgccccatctccccctgtagaaaaagagcttccctctcctgcccca
gtgatggtggcgcccatcactgcccctcgtcctgttgccagccccaaccccattgagcag
ccctctgcagtggagcctgctactcccactccctctgcagctgagcccaagaccctgcct
cccacgactcattcccagaccccaaacacagtggagcctcttccagaagccccacacacc
ctggctgcttcccccaccctaaccccaaaagctttgaatggccatgctgacactggggct
gagctggacacccaggcccaggagccctcccccctagatccctctccctccccaccccag
ccccaggcttcaaccccggccttcagagaagactgtagtgaggctgtgcccagtgaggtg
agagcagagattccccctgctgtcacgggctctatcgcacccatcactgtagtgccagtc
actctgacctccaaacctgcgcctgcttttccagcacctccccctggccttccaccacta
gtgcaggccacagcggaggccagcaagcccgccgacactaaagacgtccctctcaaagca
gggacagaggcattcataacaccagacaacaagcctgaaccacagctacaagccctctcc
agaaagagtcccactacaggatgtcaggctgctcctgatgcaccaaagacctggaagaaa
ccaaatgaagagagtcctgttggagatgcccaacagagggagactgaggaggagctcaag
cctttggaagaggctgctggagaccaggccctgccacccgccaggagctgcagcacctct
cccccaccctcagcagctccctcagccctggaggcagaggagaggcccccagcccctgag
gaaaacggggaggctgagcccatgaggaacggagcaggacacacctcggagactgagagc
agtgacagcggggccacccctggggacaatgagggctccacaggagcccccccagacctc
ttccaggacgatctggagactaatgggaagcgtcaatacaaacgggacttcctgctgggc
tttcagttcatggctgcatgtacacagaagccagacgggctgcctcagatcagtgacgtt
gtgctggacaagataaaccaaaacaagctgccaacccgggcggtagaatccagggtgatc
tcccgaggccctgacttcacaccggcctttgctgactttggcagacagatgagtggagga
cgcggcggagctgcagtgagtcacactcactcccaggctcaccagatgatgaacatgggg
gggggtgcccggcggcccccgcccaggaagattatcctgaacgtgtcagcgaatgaagag
gtgcaactgaagaaggctgagaatgcctggaaacccggcatgaagagggcggggccatca
gatgaccctgaggtcattacaacacaggagctcttccggaaggtgcgcagtatcctcaac
aaactgacgcctcagatgttcaaccagctgatgaagcaggtgacagacctcaccatcgac
acggaggagcgcctcaagggcgtcatcgacctggtctttgagaaggccatcgacgagccc
ggcttctctgtggcctacgggaacatgtgtcgctgcctcaccacgctcaaagtgcccatg
acggacaaacccggaaccacagtgaacttccgcaaactgctgctcaaccgttgtcagaag
gagtttgagcgggacaaggtggatgatgtggtgtttgaaaggaaacagaaggaacttgac
tctgcacagtccagtgatcaagagagactacggttagagctggaggaggccaaggacaag
gcccgccggcgctccataggtaacatcaagttcatcggggagctgttcaagctcaagatg
ctgacagaggccatcatgcacgactgcgtggtcaagctgctgaagaaccatgacgaggaa
tcgctggagtgcctttgcaggctgctcaccaccatcggcaaggacctggactttgagaag
gccaagcctcgcatggatcagtatttcaaccagatggagaaaattgttaaggagcggaag
acatcatctcggatacggtttatgctgcaggacgtgatagacctccgattgcacaactgg
gtgtccaggagagctgaccagggccctaagaccatcgagcagatccacaaagaggccaag
attgaggagcaggaggagcagaggaaggtgcaccagcagctgctctccaaggacaccaag
agaaggccagagcaacaacagcagcagagagaacagcaaagggagcagcaaagggagcag
cgtgtgcaacagagagatgagacctggaacactgtgcccatgaccaagaacagcaggaca
atcgaccccaccaagatccccaagatctccaagcctcagatggatgagaagatccaacta
ggaccacgagcctcactcaactggatgaagggcagcagcggaggggccaaggctagtgac
tccgaattatcccggtctggtggtggtggtgccagtttaaaccggtactctgcactccag
tccactcaatctcatcaaaccaccccaccggcacagaacctagagtatgacactagaaga
accttgggcagtcgaagcagtgcagggagagagcgaagtgagaagcccctgagcccagct
ccgtcgaggcccggttccttcgtccgaggcgggagtgccaaggagcttctggagagcccg
gccctgagccctgaggagccccgcagagagctggagagccccagcgtaagcgaggacaaa
actgggccagagcgcagcagtgccagggagcctgtgaaagcagagcctgtggtggcccag
tctccagacagacctgccctctctgaggaggagatggagaggaagtccagagctatcatt
gacgagttcttgcacatcaacgattataaggaggctgtacagtgtgtggatgagctggac
atgtcctctcagctccatgtgtttgtgcgtgtgggggtggagtccactctggagcgcagt
cagatcacacgggaccacatgggcaagctcctcttccagttggtgcagcaggacatcctg
gccaggtcccaattcttcaaagggtttgctgacacccttgagctggcggatgacatggcc
attgacattccccatatctggctgtatctggccgagctgctcagccctgtgctgagagac
aggggcttctctatgagagagctctttagtgaattaagcaaacctttacttcctgtggga
agagctgggatcttattttctgaaatactgcacatactatgcaaacaaatgagccatagg
aaagtgggcaccttgtggagagagtcgggcctcagctggagtgacttcttgccagaggga
gaggatgtccaggatttcatctcagagcagaagctccagttcactgaggcggactgctcc
agccatgaggcagccctcgccacgacagcactgtcccttgtggtgctcaaccagcagcta
gagagactgctgctggaggacatggccagtgatgagcagatctttgactgggtagaggca
aatctagatgaatctcagatgagctcctctccgttcctgagagctctgatgacggctgtg
tgtaaggcagcggtgaaagatgaaagtgcttcctgtcgagtggacgtagccatcattcag
aggagattgcccgtattactcaagtaccttaactcagacactgagcgacagcttcaagca
ctttatgcactgcaggcgctgatagtcactttggatcagcctcctaacctgctccggatg
ttctttgattgtctgtatgatgaggacgtcatctcggaggatgctttttacaagtgggag
accagcaaagacccagcagaggagctgggcaagggtgtggctctcaagtctgtaacggct
ttcttcacctggctgagggaagccgaggaggagtcggaggataattga
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integrated database retrieval system
