Oncorhynchus mykiss (rainbow trout): 110528030
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Entry
110528030 CDS
T07259
Symbol
sort1a
Name
(RefSeq) sortilin isoform X2
KO
K12388
sortilin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110528030 (sort1a)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
110528030
NCBI-ProteinID:
XP_021465485
Ensembl:
ENSOMYG00000029372
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Position
7:complement(56772815..56796604)
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AA seq
702 aa
AA seq
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MIRLGQSKLYRSEDYGKTFQDVTHLINNTFVQTEFGIAIGPDNSGRVIMTGDVSEGGGSR
IFRSLDYGHSFSPADLPFFPLIQTLYNPNDNNVLLTLSITLDLWLSEDFGSTWRKIHDSV
CLVRWGPEDSIYFTTNSNGSCNDKGMLELKRSLDYGKNIKTIASKIYSFVLGGRFVFASI
MTGSGTQRMIHVSIDGGDVWNMAQLPTVGHEQFYSILAASDDMVFMHVDEPGDTGIGTIY
ISDDRGTLYSKSLERHLYTATGGDTDFTNVTSLRGVYMTSVLTEDGSVETVVSFDQGGEW
RPVQRPRNSRCDTETATNRPDRCSLHIHALYSISMKMNVPLLPLTQFNAIGLILAHGSVG
DPVSVLSPDVYVSDDGGYSWLRALTGPHHYAILDSGGLLVAVEHTSAPVNQIKFSTDEGQ
CWHVYNFTSEPLYFTGLALEPGAHSMNLSLWGYRVGLQGPLSHYWVSVTIDFKQLLSRDC
GEGDYVQWLAHSDDLNNPNDGCILGYKERFLRLRKDSVCWNGRDYVITTQPTPCQCTLDD
YQCDYGYHRAENSSECVEQADLKGHVLEFCLHGTTEQLQTSGYRKIPGDRCVGGIQPKRK
EIDLRRNCISNALHPKPLTEANLLSSASIVLVVMVILLISAATGVMLVKKYVCGGRFLVH
RYSVLQQHAEANGIEGVDELDTHTTEMGKTHYHEDSDEDLLE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgattcgccttggccagtctaaactctaccgcagcgaggactatggaaagacattccag
gacgtgacccacctgatcaacaacacctttgttcagactgagtttggcatcgccattggt
cctgacaactctggcagggtgatcatgacaggtgatgtgtcagagggagggggatcccgg
attttccgctcgttggattatggacatagtttttccccagcggacctccccttctttcct
ctgattcagacactgtataaccccaacgacaataacgtgctactgaccctcagcatcacg
ttggacctgtggctgtctgaagactttggctccacctggaggaagatccatgacagcgtg
tgtctggtcagatggggtcccgaggacagcatctacttcaccacaaactctaacggatcc
tgcaatgataagggcatgttggagctgaagaggtctctagactatggcaagaacatcaag
accatcgccagcaagatctactcctttgtacttggaggacgctttgtcttcgcctccatc
atgactggctcgggtacccagcgtatgatccatgtgtcgatagatggtggtgatgtgtgg
aacatggctcagctccctactgttggccatgagcagttctactccatattggcagccagc
gacgacatggtgttcatgcacgtagacgaacctggagacactggcatagggaccatctac
atatcagatgacagagggacactctactccaagtctctggagcgccacctctacacggcc
acagggggcgacactgatttcaccaacgtcacctcgctcaggggtgtctacatgaccagc
gtactcacagaggacggctcagtggagactgtggtgtcgtttgaccaggggggggagtgg
cggccggtacaacggcctcgaaacagccgctgtgacactgagaccgccaccaaccggccg
gaccgatgcagcctgcacatccacgccttatacagcatctctatgaagatgaacgtccct
ctactgcccctcacacagttcaacgctataggcctcattctggctcatggtagtgtgggt
gacccagtgtctgtgctgtctcctgatgtgtatgtgtctgatgatggaggctactcctgg
ctgagagcgctaaccggaccccaccactacgccatcctagactctggaggccttttggtg
gctgtcgaacacacatctgcacccgtcaaccagatcaagttttccacagacgagggccag
tgttggcatgtgtataacttcaccagtgagccgctgtatttcacagggctggcgttggag
cctggagcccactccatgaacctcagcctgtgggggtacagagtgggcctgcagggtccc
ctcagtcactactgggtctctgttaccatcgacttcaaacagctactctccagagactgt
ggggagggggactatgttcagtggttggcgcactctgatgacctcaacaaccccaatgac
ggatgcattctgggatataaggagcgtttcctgcggctgaggaaagattctgtctgctgg
aacggacgtgattatgtcatcaccacccagcccaccccctgccaatgcacactggatgac
taccagtgtgactatgggtaccaccgtgcagagaacagttctgagtgtgtggagcaggca
gacctgaagggccatgttctggagttctgtcttcacggcaccacagaacagctgcagacc
agtggctaccggaagattccaggcgaccggtgtgtgggcgggatccagcctaagaggaag
gagattgatctgaggagaaactgcatcagcaatgcacttcacccaaaacctctgacggag
gccaacttgttaagctctgcctctatagtactggttgtaatggtgattttgctcatcagc
gctgccacaggggttatgctcgtcaagaaatatgtctgcggagggaggttcctggtacac
aggtactcagtgctacaacagcatgcggaggccaatgggatagagggagtggatgaactg
gacacacacaccaccgagatgggcaaaacacactaccacgaagactcagatgaggacctc
ttggagtga
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