Oncorhynchus mykiss (rainbow trout): 110528105
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Entry
110528105 CDS
T07259
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110528105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110528105
03036 Chromosome and associated proteins [BR:
omy03036
]
110528105
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110528105
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110528105
PBAF complex
110528105
GBAF(ncBAF) complex
110528105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
110528105
NCBI-ProteinID:
XP_036839547
Ensembl:
ENSOMYG00000018111
LinkDB
All DBs
Position
7:59299042..59317047
Genome browser
AA seq
1063 aa
AA seq
DB search
MAVRKKDGGPNVKYFETSDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTRLPMKSFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSDIEAKLLGKLKDIIKRHQQGSVTEDKTCSSHVVV
PIPASLEEEEWVRPVMKRDKQVLLHWGYSPDSYDTWISASEVEAAVEDPPSPEKPRKVHA
KWILDLDQFNEWMNEEDYEVGEGGPKRKRISAKTLTDEVTTPGDERRDKKPGSAKKRKRS
PSPSPTPTSQESKKKNTKKGPTTPYTKSKRGQREEEPEDLTKDLDEPSPVPAVEEVTLPK
TANTKKDSELTPVKGGTMTDLDEQEDESMETAEKEEEEGSPSVKGEPVKGSDLHEDNVTE
QTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQE
YLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPS
SLVPLQPKASQTPAAQQILSFPDKVKEKQPADLQNFGLRTDMYSKKTGPPKSKTAANAMR
DWTEQETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDMSSSLGPL
AYQPVPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRV
EEAARASGRQDPLYGLEGSGIAGTSLEEGDKPEESSEESKSDSQSSEEKRETKENKDGAM
EEDEKQGENGKKEEERGREGEGERDRESEKTETEMGEREKEKEGKEALEEGHREGESEGE
RKAKVERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLR
HFEELETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHSQTGG
PHPAPAPTGPPPQGPSATQSQPAPSIPAPQPAPSPAPSASSVPMTGPSSAQAQPTEPQPT
PSGPHSSPPRPPGHSSTNTTPTLHESSAPGDTLHSSTAAPTPQ
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaacgtaaaatatttcgaaacgtctgatacc
gtctcgcaattcgacaatgtccgcgtttggttgggcaagaattataaaaagtacatccag
gcggagccccccaccaacaagtctctgtccagcctagtggtccagctactgcagtttcag
gaggaggtattcggacgacatgtcagcaacccacctctcaccaggctgccgatgaagagt
ttcctggactttaagtctggtggggctctctgccacattctggcagcagcctacaagttc
aagagtgatcagggctggcgcaggtttgactttcagaatccttctcggatggaccgcaat
gtggagatgttcatgactatcgagaaatccctggtacagaacaactgtctgagtcgacca
gtgatctacctgagctctgacattgaggccaagcttctggggaaactgaaggacataatc
aagaggcaccagcagggctcagtgactgaagacaagacatgcagctcccatgtggtggtt
cccatccctgccagtcttgaggaggaggagtgggtgcgtccggtgatgaagagagacaag
caggtgctgctccactggggatactctcctgacagctatgacacctggatctcagccagt
gaggtggaggcagctgtggaagatccgcccagcccagagaaacccaggaaggtccatgcc
aagtggatcctggacctggaccagtttaatgagtggatgaatgaggaggactatgaggtc
ggagaggggggccccaagaggaagaggatctcagccaagaccctgacggacgaggtgacc
accccaggggatgagcgccgggacaagaagcccggcagcgccaagaagaggaagcgctca
ccctccccctcgcccactccaacatcccaggagagcaagaagaagaacaccaagaaaggg
cccaccaccccgtacactaagtctaagcgaggccagagagaggaggagccagaggatctg
actaaagatctggatgaaccatcacctgtacctgctgtagaggaggtcaccctacctaag
acagccaacactaagaaagactctgagttgacaccagtgaaaggaggtaccatgacagac
ctggatgagcaagaggatgaatccatggaaactgcagaaaaggaggaggaggagggctct
ccgagtgtgaagggagagccggtgaaagggtcggacctccatgaggacaacgtgactgag
cagacccaccacatcatcatccccagctacgctgcatggtttgactacaacagtgtccat
gctattgagcgcagagccctcccagagtttttcaatggcaagaacaaatccaaaacccct
gagatttacctggcctacaggaacttcatgattgacacgtacaggctgaacccgcaggag
tacctcacctccaccgcctgtcgtaggaacctggccggagacgtgtgtgccatcatgagg
gtgcatgcattcctggagcagtggggtctgatcaattaccaggtggactcagagagccgg
cccacccccatgggccccccgcccacctcccacttccacgtcctggctgacaccccttcc
agcctggtgcccctgcagcccaaggcatcccagactccggcggcccagcagattctgtca
ttcccagataaggtgaaggagaagcagccagccgacctccagaactttggcctgaggaca
gacatgtacagcaagaagactgggcctcctaagagtaagactgctgccaatgccatgcga
gactggaccgaacaggagacactactgctgctagagggtctggagatgtacaaggatgac
tggaacaaggtgtcagagcacgtgggctcacgtacccaggatgagtgtatcctgcacttc
ctgcgtctgcccattgaggacccatacctggaggacatgtcctcgtccctgggccccctg
gcctaccagcccgtccccttcagccaggcaggcaaccccgtcatgagcaccgtggccttc
ctggcctccgtggtggacccccgcgtggcctccgcagccgccaagtctgccctggaggag
ttttcccgtatgaaggaggaggtcccagcagcactggtggaggcccatgtgaggagggtg
gaggaggcggcgcgggccagtggcagacaggaccccctctacggcctggagggcagcggc
attgcaggcaccagcctggaggaaggagacaaacctgaagagagcagtgaggagagtaag
agtgacagccaatccagtgaggagaagagggagaccaaggagaataaagatggagccatg
gaagaggatgagaagcaaggagaaaacgggaagaaggaggaggagagagggagagaggga
gaaggagagagggaccgagagtctgagaagacagagacagagatgggtgagagagagaag
gagaaggaagggaaggaggccttggaggagggccatagagaaggagagagcgagggcgaa
aggaaggcgaaggtggaacgggatgtgggagaggggaacctggctaccgctgctgcttct
gccctggctgctgctgccgtcaaagccaagcacctggctgcggtggaggagagaaagatc
aagtctctggtggctctgctggtggagactcagatgaagaagctggagatcaaactgaga
cactttgaagagctggagactatcatggaccgagagagggaggctttggagtaccagagg
cagcagctgctggcagaccgtcagtcattccacatggagcagttgaagtatgcagagatg
agggcgcgtcagcagcacttccaacagatccagcaccagcagcatagccagactggaggc
ccacaccccgccccggctcccacgggccccccaccccagggcccctcagccacccagtcc
cagccggcccccagtatccctgcaccacaaccagctcccagcccagcaccctctgcctcc
tccgtccccatgacaggcccctcctctgcccaggcccagcccactgagccccagccaacc
cccagtggtcctcactcctcacctccccgcccgccaggccactccagcaccaacaccacc
ccaacactccacgagtccagcgcccctggggatacactccactcctcaaccgctgctccc
actccacagtga
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integrated database retrieval system
