KEGG   Oncorhynchus mykiss (rainbow trout): 110528142
Entry
110528142         CDS       T07259                                 
Name
(RefSeq) ras-related protein rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04137  Mitophagy - animal
omy04140  Autophagy - animal
omy04144  Endocytosis
omy04145  Phagosome
omy04148  Efferocytosis
omy05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    110528142
   04145 Phagosome
    110528142
   04140 Autophagy - animal
    110528142
   04137 Mitophagy - animal
    110528142
   04148 Efferocytosis
    110528142
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110528142
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110528142
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    110528142
   04031 GTP-binding proteins [BR:omy04031]
    110528142
Membrane trafficking [BR:omy04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    110528142
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110528142
  Exosomal proteins of other body fluids (saliva and urine)
   110528142
  Exosomal proteins of colorectal cancer cells
   110528142
  Exosomal proteins of bladder cancer cells
   110528142
GTP-binding proteins [BR:omy04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    110528142
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 cobW PduV-EutP nSTAND3 AAA_16 Septin AAA_22 AAA_7 AAA_24 NTPase_1 AAA_5 ATPase_2 NACHT ABC_tran ATP-synt_ab
Other DBs
NCBI-GeneID: 110528142
NCBI-ProteinID: XP_021465638
Ensembl: ENSOMYG00000027227
LinkDB
Position
7:60338799..60355957
AA seq 207 aa
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKDNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDRNDRAKPSAEACSC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgacatccaggaagaaagtgctcctgaaagtcatcatccttggggattctggagttggg
aagacctccctgatgaaccagtatgtgaataggaagttcagtaaccagtacaaagccaca
ataggagctgacttcctgaccaaggaggtgatggtggacgatcggctcgtcacaatgcag
atctgggacacggcagggcaggagaggttccagtctctgggtgtggcgttctaccgcggg
gcagactgctgtgtgctggtgtttgatgtgactgcgcctaacaccttcaagactctagac
agctggagggacgagttcctcatccaggccagtcccagggaccccgagaacttccccttt
gtggtgctaggcaacaagatcgacctggagaacagacaggtgacgaccaagcgagctcag
gcatggtgtcagagtaaggacaacatcccctactttgagaccagtgctaaggaggccatc
aacgtagagcaggccttccagaccatcgcacgcaatgccctcaaacaggagacggaggtg
gagctgtataatgaattcccggaacccatcaagctggacagaaatgaccgagcaaagcct
tcagcagaggcctgcagctgctga

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