Oncorhynchus mykiss (rainbow trout): 110528193
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Entry
110528193 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110528193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110528193
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110528193
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110528193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
KH_DTX3L
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-RING_10
zf-C3HC4_4
zf-RING_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
110528193
NCBI-ProteinID:
XP_021465726
Ensembl:
ENSOMYG00000047205
UniProt:
A0A8C7V5B4
LinkDB
All DBs
Position
7:63118564..63128031
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AA seq
838 aa
AA seq
DB search
MAENDVDMLDVCDNSDPALAASRAPHYPQWTSPSPHGRGDMTYSSGTSGEPVIVTQPHSC
PSSHTQRTVLTDKQKNLYLTDDESEEGLDTPPQDLNQAKVEERKQPSASPDEATVYVTVK
WPRKDLPPKWESTLEKTLQSWLNKDFGDKTTDCTLKGLYYNGSWAEVKITPSTDLKVLLN
QRATQMTFKDQAKTTATVQFHKTAPSTSWNQSDFKPSSMDGSPPTSHTPQDVKLPMTVRT
IIDLSGIPHEAQVALQTRFSQYHTYHSLTFTGNFEEVEKFQRKVNKVIKEAEARPAGDWN
GLAATPSMTHKGMNTHEAPGQTEMSFPVPLTLFGYINQAYQKEMEDIQKRNGVKINADVK
VSIKEDSEKTGRDCLLPKAYQELIDLFQKCAGDFHSNSAHLPHMNLEDLQNTLKNIQNEE
SRLVLNVSANSCNVFGPKQSMVAVRKAFGVGHSSTVKTFGMDHSSTDEAFGSGRRSTEIP
QKIVLDIKDPLVSSGLSMDPAHWEMIQKIFDEQIKAIQNKFGVVFMNNPSQGKVRVTTRP
IKSQHTASLESHAIRALMHLYQKVATSTMSCYLLDTTQAGTVGDMLEKIRSRHQCVGAGE
KYGPWRLIGLPEHLGPAVKELEEKLGGPVFKEEDKQRIVYPEDFNTGAAEVGAAGEATCP
ICMDIFTNKEKLSCTHEFCKECLRRSVESMGPSCPVCKDVYGKVEGDQPDGTMTHTISYT
NLPGFTQCDTIVINYDIPDGKQTRKHPNPGKHFYGTQRRAYLPNNIEGNEVLKLLKKAFN
QRLIFTVGISRTTGAENVVTWNDIHHKTNIGGGAQSFGYPDHDYLSRVKDELKAKGIK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatgacgttgacatgctggatgtgtgtgataattctgacccagccttggct
gccagtagagcaccgcactatccacaatggacgtctcctagcccccatgggagaggtgat
atgacctattcttcaggaacaagtggggagccagtgatagtaacacagccacattcatgt
cctagcagtcacacccaaaggactgttttgactgataagcaaaagaacctgtatttgaca
gatgatgaatctgaagaaggactggatacaccaccccaggatctgaatcaagctaaggtt
gaagagagaaagcagccatcagcatctccagatgaggctacagtctacgtcactgtgaag
tggcctaggaaagaccttccaccaaaatgggaatctacactagagaaaactctccagtca
tggctcaataaagactttggtgataagactacagattgtaccttgaaaggtctttattac
aatgggtcatgggctgaggtcaagataactccctcaacagatctaaaagtacttctgaat
cagagggcaacacagatgactttcaaagaccaggccaagacaaccgctactgtgcagttt
cacaagactgcaccatctacatcctggaaccaatcagactttaaacctagctcaatggat
ggctctcctccaacatcacacactccacaggatgtcaaactcccaatgactgtaaggact
atcattgatctcagtggcatcccacatgaagcacaggttgcccttcagaccaggttcagt
cagtaccacacttatcactcactgacctttactgggaactttgaggaagtggagaagttc
caaagaaaggtgaacaaggtcatcaaggaagctgaggctaggccagcaggtgattggaat
ggtttagcagcgacaccaagtatgactcacaagggaatgaacacccatgaagcccctggg
caaacagaaatgagctttccagtcccactgaccctctttgggtacattaaccaggcctac
cagaaggagatggaggacatacagaaaagaaatggagtcaaaatcaatgcagatgtgaag
gtgtccatcaaagaagattcagagaaaacaggcagagattgtctgctgcccaaagcctac
caggagttaattgacctcttccagaagtgtgcaggtgattttcacagcaactccgcacat
ctgccacacatgaatctagaagacctccagaatacgctgaagaacatccagaatgaggag
tccaggctggtgctgaatgtgtccgccaacagttgcaatgtgtttgggccgaagcagagc
atggtagcagtcaggaaggcttttggggtgggccacagctccacagtgaagaccttcgga
atggatcacagctccacagatgaggcctttggatctggaaggagatctacagagattcca
cagaagattgtacttgacatcaaagacccactggtgtcaagtgggctgtccatggaccca
gcccactgggagatgattcaaaaaatatttgatgaacaaataaaagcaatccaaaataaa
tttggagtagttttcatgaataatccctctcaggggaaggtcagagtgacaaccagacct
atcaagtcccaacacactgcctctctggaaagccacgccatcagagctctcatgcacctc
taccagaaggttgccacgtcaacaatgagctgctatctgctagacactacccaggcaggg
accgtgggggatatgctggagaagatccgctctcgacaccaatgtgttggggcaggagaa
aaatacggtccctggaggctgattggcctaccggagcatttaggccctgctgtcaaagag
cttgaagagaagctgggtgggcctgtgtttaaagaggaagacaagcagaggattgtgtat
cctgaagacttcaacactggagcagctgaggtgggagcagctggagaagcgacatgcccc
atatgcatggatatatttaccaacaaggagaagttgtcgtgcacccatgagttttgtaaa
gagtgtctgaggcggtcagtggaatccatgggccccagctgtcctgtgtgtaaggatgtg
tacgggaaggtggagggagaccagcctgatggaacaatgacacacactatttcttacacc
aacctacctggattcactcaatgtgacacgatagttatcaactatgatattccagatgga
aaacagacgagaaaacatcccaaccctggaaagcacttctatgggacccaaagaagggct
tatctacccaataacatagaggggaatgaggtcctgaagctgctgaagaaagcatttaat
cagaggctgattttcacagttgggatctccagaaccactggggcagaaaacgtagtgacc
tggaatgacattcaccacaaaaccaacatcggaggaggggcacaaagtttcggctatcct
gaccatgactacctgagcagagtgaaagatgagctgaaagccaaaggcatcaaatga
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