Oncorhynchus mykiss (rainbow trout): 110528308
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Entry
110528308 CDS
T07259
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2 isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110528308
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110528308
Transporters [BR:
omy02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110528308
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Ortholog
Paralog
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Motif
Pfam:
SNF
Ezh2_MCSS_fung
Motif
Other DBs
NCBI-GeneID:
110528308
NCBI-ProteinID:
XP_021465942
Ensembl:
ENSOMYG00000008714
UniProt:
A0A8C7P8E9
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Position
7:complement(67245800..67276081)
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AA seq
646 aa
AA seq
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MQQLRSMLSEGNTDQSAVTAQTQTTARMGEETMVMEGNFPKDHSHNLPAQDISLVKGQKK
SQLLLDRGQWANKLEFLLAVAGTLVGLGNLWRFPYLCYKNGGGAFLIPYVLFLLSCGIPM
FLLETAMGQYTSQGCITCWRHFCPLFEGIGYATQVVIAYAAVSYIIIQAWAFFYLFSSFS
AEVPWASCRNPWNTESCVEFDKRNLSANWTVPVNATSPATEFWERRVLSISTGIEQIGRL
RWELALCLLLAWILCYFCVWKGVKSTGKVVYFTATFPYLMLIVLLARGLTLPGAIDGIKF
YLYPDPARLVDPQVWMDAGAQVLFSFGICQGSLTALGSYNHYNNDCYKDTFVLCLVNGGS
SFVAGFAIFSVLGFMSYEQGLPISEVAASGPGLAFIAYPRAVAMMPLPQLWSICFFVMVI
LLGADTQFVSLECLMTSVTDMFPTVFRRGYRRELLLLCLCSVCFFLGLLLVTEGGLYFLQ
LFDHYVCSGNNLLLLSVCQSIAIGWIYGVDRLYDNIEDMIGYRPWPVIKYCWLYVTPTVC
LGTFIFSLVQYKPLKFNKTYLYPDWAYALGWFLGLACVALVPLWMIWKVYRSKLTVWQSL
KQLCRPETNKALNQKQQSPEQCPLNPDSILNLEYKGSGVVELEMHT
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcttaggagcatgctgtctgaggggaatactgatcagtctgctgttacagca
cagacccagaccactgcgaggatgggggaggagacaatggtaatggagggaaatttccca
aaggatcacagtcataacctgcctgcccaggacatcagtctggtgaagggccaaaagaag
agccagttgctgctagaccgtggccagtgggccaacaagctagagttcctcttggccgtg
gcaggcaccttggtggggctggggaacttgtggaggttcccatatctgtgttacaaaaat
ggaggaggtgcattcctgattccctatgttctgttcctgctctcctgtgggatccccatg
ttcctcctggagacagccatgggacagtacacctcgcagggctgcatcacctgctggaga
cacttctgccctctctttgaagggattggttatgccacccaggtggtcattgcgtatgct
gcagtgtcatacatcatcatccaggcctgggccttcttctacttgttctcctccttcagt
gccgaggtgccatgggccagctgcagaaacccctggaatacagaatcttgtgtagaattt
gacaagaggaatctgtcagctaactggacagtccctgtgaatgcaacttcacctgcgaca
gagttctgggagcgcagggtgttgagcatctcaacagggatagaacagattggtagactg
cggtgggagctggctctgtgtctgctgctggcctggatactctgctacttctgtgtctgg
aaaggagtgaagtctactgggaaggtggtgtatttcacagctacctttccctatctgatg
ttgatcgttctattggctcggggactcacgttacctggagctattgatgggatcaagttc
tacctctacccggaccctgctagactggtcgacccacaggtatggatggatgctggagca
caggtgcttttctcctttggtatctgtcaagggagtctgactgcactgggcagctacaat
cattataacaatgattgctataaggacacgtttgtgctgtgtttggtgaatggaggatca
agcttcgttgctgggtttgctatcttctctgtgttgggcttcatgtcatatgaacagggg
ctgcccatatctgaagttgcagcatctggtcctggcctggctttcatagcctatcctcgt
gccgtggccatgatgcctttacctcagttgtggtccatatgtttcttcgtcatggtcatc
ttgctgggtgctgacacacagtttgtcagtctggagtgcctgatgacctctgtgacagac
atgttccccaccgtgtttcgaagggggtaccgtcgagagctgctgctgctttgtctctgc
tctgtctgcttcttcctgggactccttctggtcacagagggaggcttatattttctacaa
ctttttgaccattacgtgtgcagtggcaacaatctccttctgctctccgtctgccagtca
atagcaatcggttggatttatggagtggatcgtctctatgacaacatagaagatatgatt
gggtatcgtccctggccagtgattaagtactgttggctttacgtcacccctacagtctgt
ttgggtacattcatattttccttggtacaatataagcccctaaagttcaacaaaacctat
ttgtaccctgactgggcatatgcattggggtggttcctggggctcgcctgtgtggctctg
gtgcctctgtggatgatctggaaggtctatcggtccaaattgacagtctggcagagccta
aaacagctatgtcgcccagaaaccaacaaggccctcaaccagaagcagcaaagtcctgaa
cagtgccctctgaacccagattccattcttaatcttgagtacaagggaagtggtgtagtt
gagctagagatgcacacatga
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