KEGG   Oncorhynchus mykiss (rainbow trout): 110528361
Entry
110528361         CDS       T07259                                 
Name
(RefSeq) neurofascin isoform X1
  KO
K06757  neurofascin
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    110528361
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:omy04515]
    110528361
Cell adhesion molecules [BR:omy04515]
 Immunoglobulin superfamily
  L1 family
   110528361
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 Bravo_FIGEY V-set Ig_5 C2-set_2 Ig_4 Ig_6 Ig_VEGFR-1-like_5th Ig_DSCAM-DSCAML_C MHC_II_alpha DUF3792
Other DBs
NCBI-GeneID: 110528361
NCBI-ProteinID: XP_036839842
LinkDB
Position
7:complement(69554159..69682851)
AA seq 1349 aa
MLVQGGPWVLSVMSLLLLLWQEMSAIEVPLDQKIQQDLKQPPTIMKQSLKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNVGKDPRVTMRKRSGTLEISFRSGGRPEDYEGEYQCF
ASNDFGTALTNKILLRVSKSPLWPKEVLEPVVVGEGSSLVLACNPPPGLPPPHTFWMNSA
MMSITQDRRVSMGLNGDLYFSNVLAKDSHTDYSCNARFLFTHTIQQKNPFTLKVQTSRKV
AETPPNFLSPTGTDSSRMMVLRGQKLQLECIAAGVPTPSIKWFKKGGDLNQKVKLDNFNK
TLRIDSVSEEDAGEYMCMANNQIGSIRHSIFVQVKAAPYWLDKPFNLVLAPDESSRLVCR
ANGNPKPLIQWLVNGEPMERNSSLPNTRRSVVGDTIIFHSVQIGSSAVYQCNASNHHGYL
LANAFVSILDMAPRMLGAKNQLIKVIENNRTFLDCPFFGSPLPELRWFKNGQGSGLDGGQ
YRVYINGSLEIKRARVEDQGTYTCVASNILGKEENQVRLEVKEPTRIVRAPEHQSAIRGT
MARFDCRVKSDLTLPITVTWLKDDKPLSLGWRLKKDEDSLSIPNVHEQDEGTYTCTVKSE
IDQDTASARLTVIEDTSLYPTQSSALPADYPDPPMDLEVSDPDKRSIRLTWIPGDEHNSP
VTEFLVQFEEDRWEPGQWQNLSSYPRDLNSVILQLSPFVNYQFRVIAINSVGKSRPSRPS
QRYQTSGASPDAIPSGLKGWGTKNTNMEISWEPLLNTEQNGPNLHYSVWWRRKDTGEEWN
NVTTVGAKHIVHDTETYVPYEIKLQARNDFGPGPESNIIIGYSGEDKPTAPPTDLHVSNI
DSTKVNVHWTPVDPNTVLGEFKEYRLYYWREGSMVKGLHVNKEKKTKGFYSTVAQPTGIL
TDLQPYSHYRMFMVVANSRYDGPPSNHVDFHTKEGVPDLPQFFKIVQRSPESIHLEWDKP
LEPNGILTGYTLNYQAVNGSRVGHMQMESFLPNVTAYRLRLPDQAIRYRFYLAAHTQVGA
GKIYTGESPHFTNEEYFFSSGTDHSGAVEPTDVSMSTTVPPPLPPTTTAATTTISTTTTT
TTTTTPTTTATVTASTTATTPVLVTSTKQADTNVLGMAPGRVIWNLTVKPNSNYANVSWN
HNFPIGSSEFQLEFTLDGNGSVSSVPVNQPPIKLAGLIEGAKYRLRVYSNEYHSISSNVV
TFETSAAYIKDQVDIATQGWFIGLMCAIALIILILLIVCFIKRSRGGKYPVRDKKDLPLE
GMDQKGEDGSFDYHSDEDNKPLQGSQNSLDGGVKESDDSLVDYGEGGDGQFNEDGSFIGQ
YTVKKDKDETEGNESSEATSPVNAIYSLA
NT seq 4050 nt   +upstreamnt  +downstreamnt
atgttggtgcagggcgggccttgggtcctgtctgtcatgtcgttgctcctgctgctgtgg
caagaaatgtctgctatcgaggttcctcttgatcaaaagatccagcaggatttgaagcag
cctcccaccataatgaaacagtcattgaaggactacattgttgatcccagagataacatc
atcattgaatgtgaggccaaggggaaccccgtgccaacgttctcatggcgacggaacggg
aagttcttcaacgtggggaaggatccacgggtgacgatgcggaagcgctcgggaacgctg
gagattagcttccggagcggagggaggccagaggactacgagggggaataccagtgtttc
gcctctaatgactttggaacggcgctgaccaacaagatcctactacgagtgtccaagtcc
cctctgtggcccaaggaggtgttggagccagtagtagtgggtgagggttcttccctggtc
ttggcctgtaaccctcctccaggcctgccccctccacacaccttctggatgaacagcgcc
atgatgtctataacccaagataggcgtgtgtccatgggtctgaatggagatctgtatttc
tctaatgttctggctaaagactcgcacacagactacagctgcaacgcccgcttcctcttc
acacacaccatccagcagaagaaccccttcacactcaaagtgcagaccagtcgtaaggta
gcagagactccccctaacttcctctcccctacggggactgacagctcaaggatgatggtg
ctgagaggacaaaaactacagctggagtgtatcgctgctggagttcccacccccagtata
aagtggtttaagaagggaggagacctgaaccagaaggtgaagctagacaacttcaataag
actctgcgtattgacagcgtgtcagaggaggacgcaggggagtacatgtgtatggccaac
aatcagataggaagcatccgacactccatcttcgtccaggttaaagcggctccctattgg
ctggacaagccgttcaacctggtgttagcaccggatgagagcagtcgcctggtgtgtcgg
gccaatgggaaccccaaaccactcatccagtggctggtcaacggagagcctatggagaga
aatagctccctgcccaacaccagaagatcggtggtaggtgacaccatcatctttcactct
gttcagatcggcagcagcgctgtgtaccaatgtaacgcctccaatcaccatggttacctg
ctggccaacgctttcgtcagcatattggacatggctcccaggatgcttggtgctaagaac
cagctaataaaggtgatagagaacaacagaaccttcctggactgtcccttctttggctcg
ccacttcctgagctacgttggtttaagaatggtcagggcagtggtctggacggtggtcaa
taccgggtctacatcaacgggagcctagagatcaagcgtgcgcgggttgaggaccagggt
acatacacctgtgtggccagcaacatcctgggcaaggaggagaaccaggtccgactggag
gtcaaagagccgacccgtatcgtcagggctccagagcaccagtcagcaattagaggcacc
atggctcgttttgactgccgggtcaaatcagacctcaccctgcccatcactgttacctgg
ctgaaggatgacaagcctctctctctgggatggaggttaaagaaggatgaggattccctg
tccatccctaatgtccacgagcaggatgagggaacatacacctgtactgttaaatcagag
atcgaccaagacactgcctcagcacgtcttactgtgatagaggacacctccctgtatccc
acacagtctagtgccttgcctgctgactatcctgaccctcccatggacctggaggtgtct
gacccagacaaacgcagcatacgactgacctggatacctggagatgaacacaacagccct
gtcacagagttccttgttcagtttgaggaggaccgttgggaacctggtcaatggcagaac
ctgtctagttaccccagagacctcaactctgtcatcctgcagctctctcccttcgtcaac
taccagttcagagttatcgctatcaactctgtgggcaagagccggcccagccgcccctcg
caaagatatcagaccagcggagcctctcctgatgctatccctagtggcctgaaaggctgg
ggcaccaagaacacaaacatggagatcagctgggagcccttgttgaacacagagcaaaac
ggccctaacctgcactactcggtgtggtggaggcgtaaggatacgggggaggaatggaac
aacgtgactacggtgggggcgaagcacattgtccacgacacagagacctacgttccctat
gagatcaaactgcaggccaggaatgacttcggaccaggacctgagtccaacatcatcata
ggatattctggggaggacaagcctacagcccctcctacagacctgcatgtgtcaaatatt
gacagcaccaaggtcaacgtccactggaccccggtagaccccaacactgtcctgggagag
ttcaaggagtacaggctgtactactggcgtgagggcagcatggtgaagggtctgcatgtg
aataaagagaagaagactaaagggttctacagtaccgtggcccagcctactggcatattg
acagacctacagccatacagccactaccgcatgtttatggtggtcgccaacagtcgttac
gatgggccgccgagcaaccatgtggatttccatactaaggaaggagtgccagatcttcct
cagttctttaagatcgtccagaggagtccagagtctatccaccttgagtgggacaaaccc
ctggagcctaacggcattctgactggatacacactcaactatcaagcagtgaacgggtca
cgtgtgggccacatgcagatggagagtttcctccctaacgtgacagcctacagactccgc
ttgccagaccaagctattcgctacaggttctacctggcggcccacacacaggtgggagca
gggaagatctacactggggagtctccacatttcaccaatgaagaatactttttcagctca
ggtactgaccactcaggtgcagtcgagcctacagacgtctccatgtctacaactgtccca
cctcctcttcctcccactactaccgctgctactacaaccattagtactactaccactact
actactactactactcctactactaccgcaactgttactgcttctactaccgctaccact
cctgtgttggtcaccagcaccaagcaagcagatacaaatgtgttgggcatggctcctggg
agggtgatctggaacttgacggtgaagcctaacagtaactacgctaacgtcagctggaac
cacaacttcccaatcggcagcagcgagttccagctagagttcacactggacggcaatggc
agtgtgtcaagcgtaccagtgaaccagccgcccattaagctggcggggctgatcgaaggg
gccaagtaccgcctgagggtgtactccaacgaataccacagcatctccagcaatgttgtc
acctttgagaccagcgcagcctacattaaagaccaggtggacattgctacccagggctgg
tttatcgggctgatgtgtgccatcgctctcatcatcctcatcctcctcatcgtctgcttc
atcaagaggagtcgcggaggcaaatatccagtacgagataaaaaagatctccctctggag
ggaatggatcagaagggagaggatggatcatttgactaccacagcgacgaggacaacaag
cctctgcagggcagccagaactctctggacggcggggtgaaggagagtgacgacagcctg
gtggactatggcgagggaggggatggccagttcaacgaggacggctccttcatcggccag
tacactgtcaaaaaggacaaggacgagacggaaggcaacgagagttccgaggccacctca
cccgtcaacgccatctactcgctggcatag

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