Oncorhynchus mykiss (rainbow trout): 110528361
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Entry
110528361 CDS
T07259
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110528361
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110528361
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
L1 family
110528361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_5
C2-set_2
Ig_4
Ig_6
Ig_VEGFR-1-like_5th
Ig_DSCAM-DSCAML_C
MHC_II_alpha
DUF3792
Motif
Other DBs
NCBI-GeneID:
110528361
NCBI-ProteinID:
XP_036839842
LinkDB
All DBs
Position
7:complement(69554159..69682851)
Genome browser
AA seq
1349 aa
AA seq
DB search
MLVQGGPWVLSVMSLLLLLWQEMSAIEVPLDQKIQQDLKQPPTIMKQSLKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNVGKDPRVTMRKRSGTLEISFRSGGRPEDYEGEYQCF
ASNDFGTALTNKILLRVSKSPLWPKEVLEPVVVGEGSSLVLACNPPPGLPPPHTFWMNSA
MMSITQDRRVSMGLNGDLYFSNVLAKDSHTDYSCNARFLFTHTIQQKNPFTLKVQTSRKV
AETPPNFLSPTGTDSSRMMVLRGQKLQLECIAAGVPTPSIKWFKKGGDLNQKVKLDNFNK
TLRIDSVSEEDAGEYMCMANNQIGSIRHSIFVQVKAAPYWLDKPFNLVLAPDESSRLVCR
ANGNPKPLIQWLVNGEPMERNSSLPNTRRSVVGDTIIFHSVQIGSSAVYQCNASNHHGYL
LANAFVSILDMAPRMLGAKNQLIKVIENNRTFLDCPFFGSPLPELRWFKNGQGSGLDGGQ
YRVYINGSLEIKRARVEDQGTYTCVASNILGKEENQVRLEVKEPTRIVRAPEHQSAIRGT
MARFDCRVKSDLTLPITVTWLKDDKPLSLGWRLKKDEDSLSIPNVHEQDEGTYTCTVKSE
IDQDTASARLTVIEDTSLYPTQSSALPADYPDPPMDLEVSDPDKRSIRLTWIPGDEHNSP
VTEFLVQFEEDRWEPGQWQNLSSYPRDLNSVILQLSPFVNYQFRVIAINSVGKSRPSRPS
QRYQTSGASPDAIPSGLKGWGTKNTNMEISWEPLLNTEQNGPNLHYSVWWRRKDTGEEWN
NVTTVGAKHIVHDTETYVPYEIKLQARNDFGPGPESNIIIGYSGEDKPTAPPTDLHVSNI
DSTKVNVHWTPVDPNTVLGEFKEYRLYYWREGSMVKGLHVNKEKKTKGFYSTVAQPTGIL
TDLQPYSHYRMFMVVANSRYDGPPSNHVDFHTKEGVPDLPQFFKIVQRSPESIHLEWDKP
LEPNGILTGYTLNYQAVNGSRVGHMQMESFLPNVTAYRLRLPDQAIRYRFYLAAHTQVGA
GKIYTGESPHFTNEEYFFSSGTDHSGAVEPTDVSMSTTVPPPLPPTTTAATTTISTTTTT
TTTTTPTTTATVTASTTATTPVLVTSTKQADTNVLGMAPGRVIWNLTVKPNSNYANVSWN
HNFPIGSSEFQLEFTLDGNGSVSSVPVNQPPIKLAGLIEGAKYRLRVYSNEYHSISSNVV
TFETSAAYIKDQVDIATQGWFIGLMCAIALIILILLIVCFIKRSRGGKYPVRDKKDLPLE
GMDQKGEDGSFDYHSDEDNKPLQGSQNSLDGGVKESDDSLVDYGEGGDGQFNEDGSFIGQ
YTVKKDKDETEGNESSEATSPVNAIYSLA
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgcagggcgggccttgggtcctgtctgtcatgtcgttgctcctgctgctgtgg
caagaaatgtctgctatcgaggttcctcttgatcaaaagatccagcaggatttgaagcag
cctcccaccataatgaaacagtcattgaaggactacattgttgatcccagagataacatc
atcattgaatgtgaggccaaggggaaccccgtgccaacgttctcatggcgacggaacggg
aagttcttcaacgtggggaaggatccacgggtgacgatgcggaagcgctcgggaacgctg
gagattagcttccggagcggagggaggccagaggactacgagggggaataccagtgtttc
gcctctaatgactttggaacggcgctgaccaacaagatcctactacgagtgtccaagtcc
cctctgtggcccaaggaggtgttggagccagtagtagtgggtgagggttcttccctggtc
ttggcctgtaaccctcctccaggcctgccccctccacacaccttctggatgaacagcgcc
atgatgtctataacccaagataggcgtgtgtccatgggtctgaatggagatctgtatttc
tctaatgttctggctaaagactcgcacacagactacagctgcaacgcccgcttcctcttc
acacacaccatccagcagaagaaccccttcacactcaaagtgcagaccagtcgtaaggta
gcagagactccccctaacttcctctcccctacggggactgacagctcaaggatgatggtg
ctgagaggacaaaaactacagctggagtgtatcgctgctggagttcccacccccagtata
aagtggtttaagaagggaggagacctgaaccagaaggtgaagctagacaacttcaataag
actctgcgtattgacagcgtgtcagaggaggacgcaggggagtacatgtgtatggccaac
aatcagataggaagcatccgacactccatcttcgtccaggttaaagcggctccctattgg
ctggacaagccgttcaacctggtgttagcaccggatgagagcagtcgcctggtgtgtcgg
gccaatgggaaccccaaaccactcatccagtggctggtcaacggagagcctatggagaga
aatagctccctgcccaacaccagaagatcggtggtaggtgacaccatcatctttcactct
gttcagatcggcagcagcgctgtgtaccaatgtaacgcctccaatcaccatggttacctg
ctggccaacgctttcgtcagcatattggacatggctcccaggatgcttggtgctaagaac
cagctaataaaggtgatagagaacaacagaaccttcctggactgtcccttctttggctcg
ccacttcctgagctacgttggtttaagaatggtcagggcagtggtctggacggtggtcaa
taccgggtctacatcaacgggagcctagagatcaagcgtgcgcgggttgaggaccagggt
acatacacctgtgtggccagcaacatcctgggcaaggaggagaaccaggtccgactggag
gtcaaagagccgacccgtatcgtcagggctccagagcaccagtcagcaattagaggcacc
atggctcgttttgactgccgggtcaaatcagacctcaccctgcccatcactgttacctgg
ctgaaggatgacaagcctctctctctgggatggaggttaaagaaggatgaggattccctg
tccatccctaatgtccacgagcaggatgagggaacatacacctgtactgttaaatcagag
atcgaccaagacactgcctcagcacgtcttactgtgatagaggacacctccctgtatccc
acacagtctagtgccttgcctgctgactatcctgaccctcccatggacctggaggtgtct
gacccagacaaacgcagcatacgactgacctggatacctggagatgaacacaacagccct
gtcacagagttccttgttcagtttgaggaggaccgttgggaacctggtcaatggcagaac
ctgtctagttaccccagagacctcaactctgtcatcctgcagctctctcccttcgtcaac
taccagttcagagttatcgctatcaactctgtgggcaagagccggcccagccgcccctcg
caaagatatcagaccagcggagcctctcctgatgctatccctagtggcctgaaaggctgg
ggcaccaagaacacaaacatggagatcagctgggagcccttgttgaacacagagcaaaac
ggccctaacctgcactactcggtgtggtggaggcgtaaggatacgggggaggaatggaac
aacgtgactacggtgggggcgaagcacattgtccacgacacagagacctacgttccctat
gagatcaaactgcaggccaggaatgacttcggaccaggacctgagtccaacatcatcata
ggatattctggggaggacaagcctacagcccctcctacagacctgcatgtgtcaaatatt
gacagcaccaaggtcaacgtccactggaccccggtagaccccaacactgtcctgggagag
ttcaaggagtacaggctgtactactggcgtgagggcagcatggtgaagggtctgcatgtg
aataaagagaagaagactaaagggttctacagtaccgtggcccagcctactggcatattg
acagacctacagccatacagccactaccgcatgtttatggtggtcgccaacagtcgttac
gatgggccgccgagcaaccatgtggatttccatactaaggaaggagtgccagatcttcct
cagttctttaagatcgtccagaggagtccagagtctatccaccttgagtgggacaaaccc
ctggagcctaacggcattctgactggatacacactcaactatcaagcagtgaacgggtca
cgtgtgggccacatgcagatggagagtttcctccctaacgtgacagcctacagactccgc
ttgccagaccaagctattcgctacaggttctacctggcggcccacacacaggtgggagca
gggaagatctacactggggagtctccacatttcaccaatgaagaatactttttcagctca
ggtactgaccactcaggtgcagtcgagcctacagacgtctccatgtctacaactgtccca
cctcctcttcctcccactactaccgctgctactacaaccattagtactactaccactact
actactactactactcctactactaccgcaactgttactgcttctactaccgctaccact
cctgtgttggtcaccagcaccaagcaagcagatacaaatgtgttgggcatggctcctggg
agggtgatctggaacttgacggtgaagcctaacagtaactacgctaacgtcagctggaac
cacaacttcccaatcggcagcagcgagttccagctagagttcacactggacggcaatggc
agtgtgtcaagcgtaccagtgaaccagccgcccattaagctggcggggctgatcgaaggg
gccaagtaccgcctgagggtgtactccaacgaataccacagcatctccagcaatgttgtc
acctttgagaccagcgcagcctacattaaagaccaggtggacattgctacccagggctgg
tttatcgggctgatgtgtgccatcgctctcatcatcctcatcctcctcatcgtctgcttc
atcaagaggagtcgcggaggcaaatatccagtacgagataaaaaagatctccctctggag
ggaatggatcagaagggagaggatggatcatttgactaccacagcgacgaggacaacaag
cctctgcagggcagccagaactctctggacggcggggtgaaggagagtgacgacagcctg
gtggactatggcgagggaggggatggccagttcaacgaggacggctccttcatcggccag
tacactgtcaaaaaggacaaggacgagacggaaggcaacgagagttccgaggccacctca
cccgtcaacgccatctactcgctggcatag
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