Oncorhynchus mykiss (rainbow trout): 110528367
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Entry
110528367 CDS
T07259
Symbol
csf1a
Name
(RefSeq) uncharacterized protein csf1a
KO
K05453
macrophage colony-stimulating factor 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110528367 (csf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110528367 (csf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omy04052
]
110528367 (csf1a)
Cytokines and neuropeptides [BR:
omy04052
]
Cytokines
CSF and other factors
110528367 (csf1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
Motif
Other DBs
NCBI-GeneID:
110528367
NCBI-ProteinID:
XP_021466059
Ensembl:
ENSOMYG00000041802
UniProt:
A0A8C7TX75
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All DBs
Position
7:complement(70082033..70113471)
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AA seq
629 aa
AA seq
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MNTHKPAHKAKARHLCFLVLFCFPLAWAGVPGPCRHSVTKGHLLNLNRLIDNQLENGCSI
TYVFTELQSLSEVCYVKATFPQILELLNTNFNYVMKSDNGRYVKSLKKVIYNLYSHNCIP
EINEEIEDNPVKFVRVHSTSPREALRKARGVIEMYMTLMTKSNGPVDWNCEEEYAEDYSE
SATVLPTQTKAEPEPEHQCACPTVGPVAPDVSLVSHSVWSNLPQPTLSQPTSAMQPRPPH
PTVGPVAPDVSLVSHSVWSNLPQPTLSQPTSAMQPRPPHPTLGTHSGDPGVFLGSPGTVG
PPSLRELQVTVPDGHSLGEGREGELHWDSRPPPPTGTESDSALYKTGSNPPSATDHPLVS
SPPSLVLLETVGSKDKAFYYPQTERAMEASADKPAGRGAAGSPHNLFAVPRVKLVTPVPF
LYKALITLSSDESTAYVLAKRSLDARNYGIYQDGVSTETPQLQETTKTYPSTERYSHDWN
HPIGSTATEASPHLKMTEEEPDKLHTTTKVLGQIRKTESKHTRTYYEEVLSTDILSEKTD
VDDTPISEMPSEGAEKKFQNRKTGHYDSSTYYQTAFIIAAMCGGFLLITTLFSEKKRLRA
LLHSANIIENQRACRNIKDIELQYYKVKD
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacacaaaccagcccacaaagccaaggctaggcatttgtgctttctcgtccta
ttctgcttccctttggcgtgggctggcgtccctggtccatgtcggcactctgtgacaaag
ggtcacctcctcaacctcaatcgcctgattgacaatcagttggagaatggctgttcaata
acctatgtatttactgagctccagagtttgagtgaagtctgttatgtgaaagcaacattt
ccacaaatcctggagcttctgaacacaaacttcaattatgtcatgaagtcggacaatggg
cgctatgtcaaatccctgaagaaggtcatatacaacctttactcccacaactgcataccc
gaaatcaacgaggagattgaggacaacccagtgaagtttgtgagggtgcacagcacctca
cccagagaggctctgaggaaagcccgtggggtcattgagatgtacatgaccctgatgacc
aagagcaacgggcctgttgactggaactgtgaggaagagtacgctgaggattactcagaa
tccgccactgtcctccccacccaaaccaaagctgaacctgaaccggaacatcagtgtgca
tgtccaacagtgggtccggtggcccctgatgtctccctggtctcccacagtgtatggagc
aatctcccacagcccaccctctcccaacccacctcagccatgcaacccaggcctcctcac
ccaaccgtgggtccggtggcccctgatgtctccctggtctcccacagtgtatggagcaat
ctcccacagcccaccctctcccaacccacctcagccatgcaacccaggcctcctcaccca
accttgggtacccacagcggtgaccctggggtgttcctagggagtcctggtaccgtagga
cccccctcccttagggagctgcaggtgactgtccctgatggacattcacttggagagggc
agggagggggagttacactgggactctcgtccacctccacccactggaactgagtcagac
tctgcactctataaaacaggctctaaccccccttctgctacagaccaccctttagtgtct
tcccctcccagcctagttctcctggagactgttggctccaaggacaaggctttttactac
ccccagactgaaagggcgatggaggcttctgcagacaaaccagcagggagaggagcagca
ggttcaccccacaatctctttgctgtccctagggtcaagctggtcacacctgtccctttc
ttgtacaaggctctcatcaccctcagtagtgatgagagcactgcctatgtgttggccaag
aggtcactggacgccaggaactatggaatatatcaggatggagtttcaacagagacccct
caactacaggagactacaaaaacatacccaagcacagagagatattcacatgactggaac
catccgattgggagcactgcgactgaagcatctccacatttgaagatgacagaggaggag
ccagacaaactacacaccactacaaaggtcctgggccaaatcaggaaaactgagtcaaaa
catactaggacatactatgaggaagtcttgagcacagatatcctgtcagagaagacagat
gtggatgacactcctatttcagaaatgcccagtgaaggcgcagagaagaaattccagaat
aggaaaactggtcattacgattccagcacctactaccagacagcctttatcattgcagcc
atgtgcggtggatttctcctcatcacaacactattcagtgagaagaagagactccgagcc
cttctccacagtgccaacataattgaaaaccagagggcatgccgcaacattaaggacatt
gagctgcagtattataaagtcaaggattga
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