Oncorhynchus mykiss (rainbow trout): 110528387
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Entry
110528387 CDS
T07259
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04020
Calcium signaling pathway
omy04260
Cardiac muscle contraction
omy04261
Adrenergic signaling in cardiomyocytes
omy04270
Vascular smooth muscle contraction
omy04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110528387
04020 Calcium signaling pathway
110528387
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
110528387
09153 Circulatory system
04260 Cardiac muscle contraction
110528387
04261 Adrenergic signaling in cardiomyocytes
110528387
04270 Vascular smooth muscle contraction
110528387
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110528387
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110528387
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
110528387
NCBI-ProteinID:
XP_036839873
Ensembl:
ENSOMYG00000042649
UniProt:
A0A8C7TMA5
LinkDB
All DBs
Position
7:complement(70951434..70999775)
Genome browser
AA seq
1835 aa
AA seq
DB search
MGDSGGEPNLQSYIMDEETLKRKQKEKLKKLLATGGNPRPARSLFFLTLKNPFRKAAINI
VEWKPFEIIILLTIFANCVALAVFLPMPEEDSNNTNSNLESLEYIFLIVFSIECFLKIVS
YGFLFHENAYLRNCWNILDFVCVSVGLFAVIGDSITYISGVEAQPGEKGGGFDMKALRAF
RVLRPLRLVSGVPSLQVVMNSILKSMLPLFHISLLVFFMVTIYAIVGLELFKCKMHKTCY
YTGTNIIATVENEKPSPCAQAGNGRRCTINGTDCRAGWAGPNNGITHFDNLGFAMLTVYQ
CITTQGWTDVLYWVNDAIGMEWPWMYFLTLILVGSFFVLNLVLGVLSGEFTKEREKGKAR
GEYTEMRETQQLDEDVKGYMEWITQAEVMDADGEGQGLLPLEDGESEAGSLKDMDTMQKI
MYYYKLARKWNIFFRRKCLVYVKSRMFYWWVIFLVFLNTLAIATEHHKQSQQLTEWQDTA
NKVLLSLFAIEMIIKMYALGLQQYFMSLFNRFDCFVVSTGILELILVRMDVMTVMGISVL
RCIRLLRLLKVTKYWTSLSNLVVSLLNSTKSIACLLLLLFLFIVIFSLLGMQVFGGKFNF
PNQPKPRSTFDSFPQALISVFQILTGEDWNAVMYDGIMAHGGPTMPGILVSIYFIILFVC
GNYILLNVFLAIAVDNLAEAESLTMAQKEKSEEKKRKKLLRANMPDKATEEKALLAKKLA
AERAKIEGIPTTAKLKVDEFESNVNEIKDPFPPADFPGDDEEEEPDIPDAPRPRPMADLQ
LKEEVVPIPEASSFYIFSPENKFRKLCHRIINATTFTNTILLFILLSSISLAAEDPIDPM
SFRNQVLASADVVFTSVFTVEVVLKMTVYGAIMHPGSFCRNSFNILDLIVVTVSLLSMLM
ESSAISVVKILRVLRVLRPLRAINRAEGLKHVVQCVFVAIKTIGNIVLVTMLLDFMFACI
GVQLFKGQFYSCTDPDKMTEEECRGNYIRYQEGAIHPMTIHKREWINSELNFDNILEGML
ALFTVSTFEGWPKLLYKAIDSNMEDVGPIYNNRVAISIFFIIYLILIAFFMMNIFVGFVI
VTFQEQGEQEYKNCELDKNQRACVEYALKARPLRCYIPKNQYQYNVWYIVTSCYFEYLMF
LLIMLNTMCLGMQHCNQSTHVTDLSDMLNVIFTVLFTVEMVLKLMAYKAKGYFGDPWNVF
DFVIVIGSVVDVILSEVDAALASSGGLYCLHGCAEVNPMQAIAASENARVSITFFRLFRV
MRLVKLLNRSEGIRNLLWTFIKSFQALPYVALLILMLFFIYAVVGMQIFGKIALIDGTHI
NRNNNFQTFPHAVLLLFRCATGEAWQEVMLACLYGKRCDPKSDYLPGEEMTCGASFAIIY
FMSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKKIWAEYDPEATGRIKHL
DVVTLLRRIQPPLGFGKFCPHRVACKRLVSMNMPLNSDGTVTFNATLFSLVRTALKIKTE
GNFEQANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQDYFRKLKKRQ
EEYYGFRPTKKNASNEIQAGLRSIEEEVAPELQRAISGDLMNEEEMDRAMEDAAEEGIFR
RAGGLFGNHVDSFTMEEGTHNPNATQVTSQRPLQMSKSDEGEATSSPAYHANEEFFPTMP
NKTNNNNVNSNAGESFPYETDDRVQVYTISTSRIPRDTTDWQLQTVPGPSQDHETPRETP
SPQQAETQTPDSTFDTLIKEVLINGGLESLARDSCFVSVTKQEMAEALNFDPVDMESSAT
DLMNGRRGRVTTPPIRPPRRSQRKANKLTKPTDHV
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atgggggacagtggtggcgaaccgaacctgcagtcctacattatggacgaggaaactctg
aagagaaagcagaaggagaagctaaagaagctcctggccactggaggaaaccctcggcct
gcgcgctctctcttcttcctcacgctgaagaaccctttccgcaaggctgccattaacatt
gtggaatggaaacctttcgagatcattatcctgctgaccatctttgccaactgcgtggcc
ctggctgtgtttcttcccatgcctgaggaggacagcaacaacaccaacagtaacctggaa
agtctggagtacatcttcctcatcgtcttctccatagagtgctttctaaagatagtatcc
tatggatttctatttcacgagaatgcatatctacggaactgttggaacatactggacttt
gtctgtgtgtctgttgggctgttcgcagtcatcggtgactccatcacctatatcagtggt
gtggaggctcaaccaggggagaagggaggaggcttcgatatgaaggccctcagggcgttc
agggtgctccggcccctcaggctggtctctggagtccccagcctgcaggtggtgatgaat
tccatcctgaagtccatgttacctctgttccatatctccctgctggtattcttcatggtc
actatctatgccatcgtgggactggagctcttcaagtgcaagatgcacaaaacctgctac
tacacaggcacaaatatcatagccacggtggagaatgagaagccatctccttgtgcccaa
gccgggaacgggcggcgctgcaccatcaacgggacagactgtagggcaggttgggccgga
cccaacaacggcatcacacactttgacaacctgggcttcgctatgctcactgtttaccag
tgcatcactacccagggctggaccgacgtgttatactgggtgaatgatgctattggtatg
gagtggccatggatgtattttctgactctcatcttggttggctccttctttgtgctcaac
ctggtcctgggcgtgctcagtggtgaattcactaaggagcgagagaagggcaaggcgcgc
ggagagtacacagagatgagggagacccagcagctggatgaggatgtgaagggctacatg
gagtggatcacacaggccgaagtcatggacgccgacggggagggacagggcctgctaccc
ctggaagatggagaatctgaggcagggagtctaaaggacatggacacaatgcaaaaaatc
atgtactactacaagcttgctcgtaaatggaacattttcttccggcgtaagtgtcttgtg
tatgtgaaatcccgtatgttctactggtgggtgatctttctggtgtttctgaacacgctg
gccatcgctactgaacaccacaagcagtcccagcaactcactgagtggcaagacactgcc
aacaaggttctgctgtctctgtttgccattgagatgataataaagatgtatgctctgggc
ctccagcaatacttcatgtctctgttcaaccgcttcgactgcttcgtggtctccaccggc
attctggaactcatcctggtccgcatggacgtcatgaccgtcatgggcatctctgtgctg
cgctgcatacgactgctaaggctgctcaaagtcaccaagtactggacatctctcagtaac
ctggtggtatccctgctgaactccacaaagtccattgcctgcctgctcctcctcctcttc
ctcttcatcgtcatcttctctctgctgggcatgcaggtgttcgggggaaaattcaacttc
cccaaccagcccaaaccccgcagcacatttgacagcttcccccaggccctcatcagtgtc
ttccagatcctgacgggggaggactggaacgctgtgatgtatgatggcatcatggcgcat
ggcggtcccacaatgcccgggatcctcgtcagcatctacttcatcatcctctttgtctgc
ggaaactacatcctgctgaatgtgttcctggccatcgccgtggacaacctggcggaggcc
gagagtctgaccatggcccagaaggagaagtctgaggagaagaaacgcaagaagctgctc
agggctaacatgcctgacaaggcaacagaggagaaggcactcctggccaagaagttggca
gcagagagggctaaaatagagggcatccctactactgccaagctgaaagtagacgagttt
gagtccaacgtgaatgagatcaaggaccccttcccccctgctgacttccctggcgatgat
gaggaggaagagcctgatatccctgacgccccgaggccccgaccaatggcagacctgcag
ctgaaggaggaggtggtaccgattccagaggccagctccttctacatcttcagccctgag
aacaagttccgtaagctgtgccaccgcatcatcaacgcaaccactttcaccaacaccatc
ctcctcttcatcctcctcagcagcatctccctagccgccgaggaccccatcgaccccatg
tccttcaggaaccaggtgctggcctccgctgacgtcgtcttcacgtcagtattcaccgtg
gaagttgtcctcaagatgaccgtatatggagccataatgcaccctggctccttctgccgg
aactcctttaatattttggatctgatagttgtcaccgtatccctcctctccatgctcatg
gagtccagtgctatctctgtggtgaagatcctcagggtgttaagagtgctgaggccccta
agggccatcaacagggctgagggtctcaagcatgttgtccagtgtgtttttgtggccatc
aaaaccattggcaacatcgtgctggtcaccatgctgctagacttcatgtttgcctgcatt
ggagtccagctcttcaagggacaattctactcctgcacagatcctgacaaaatgacagag
gaggagtgtaggggtaactatattaggtaccaggaaggtgccatccatccaatgacgatc
cataagagagagtggatcaactcagagctcaactttgacaacatccttgagggcatgctg
gctctcttcactgtctccacctttgagggctggccaaaactgctgtacaaggccatagac
tctaacatggaagatgttggtcccatctacaacaaccgcgttgccatctccatcttcttc
atcatttacctcatcctcatcgccttcttcatgatgaacatcttcgtcggcttcgtcatc
gttacatttcaggagcaaggagagcaggagtacaagaactgtgagctggacaagaaccag
cgggcgtgtgttgagtacgccctgaaagcccggccgctgcgctgctacattcctaagaac
cagtatcagtacaacgtgtggtacatcgtcacctcctgctactttgagtacctgatgttc
ctgctcatcatgctgaacaccatgtgtctggggatgcagcactgtaaccagtcaacccat
gtgaccgacctgtctgacatgctgaacgtgatcttcactgtgctcttcactgtggagatg
gtcctcaaactcatggcctacaaagctaagggttactttggggacccatggaacgtcttt
gactttgtcatcgtcatcggcagcgttgttgacgtcatcctgagtgaggtcgatgcagcc
ctggcctcctctggaggactgtactgtctccacggctgcgctgaggtgaacccaatgcaa
gccatagcggcttcggaaaatgcccgtgtgtcaatcaccttctttagactgttccgtgtg
atgcgtctggttaaactgctgaaccgttctgaggggatccggaatcttctgtggaccttc
atcaagtccttccaggctctgccctacgtcgccctgctcatcctcatgctattcttcatc
tacgctgttgttgggatgcagatatttggtaagatagcgctgatagatgggacacacatc
aacaggaacaacaacttccagacattcccccatgctgtgctgctgctcttcaggtgtgcg
acaggtgaggcgtggcaggaagtgatgttggcatgtctgtatgggaagaggtgtgaccct
aagtcagactacctgcctggagaggagatgacctgtggagccagcttcgctatcatctac
ttcatgagcttctacatgctctgtgccttcctgatcatcaacctgtttgtggcggtcatc
atggacaactttgactacctgacccgtgattggtccatcctgggtcctcatcacctggat
gagtttaagaagatctgggcagaatacgacccagaggccacgggtcgtattaagcacctg
gacgtggtgactctgctgcgtaggatccagcctcctctgggctttggaaagttctgtccc
catagagtggcctgcaagagactggtgtccatgaacatgccactcaacagtgatggaacg
gtcacctttaatgctacgctgttctcgctggtcaggaccgcattgaagattaagaccgaa
ggtaactttgagcaggccaatgaggagttgagggccatcatcaagaagatctggaaacgc
accagtatgaagctgctggaccaggttatcccaccaatcggagatgatgaggtaaccgtg
gggaagttctatgccaccttcctgatccaggactacttcaggaagttaaagaagagacag
gaagagtattatggcttccgccccaccaagaagaacgcctccaacgagatacaggcgggt
ctgagaagcattgaggaggaggtggctccagagttgcagagagccatctcgggagacctg
atgaacgaggaggagatggacagagccatggaggatgcagcggaggaaggcatcttcagg
cgggcgggcggtctgtttgggaaccatgttgattccttcaccatggaggaaggaacccat
aaccctaatgctacacaggtgaccagccagcggcccctgcaaatgagcaagtcagatgag
ggggaggcgaccagctcacctgcctaccatgcaaacgaggaattcttccccacaatgcct
aacaaaaccaacaacaacaatgtcaacagcaatgccggggagagttttccctatgagaca
gatgacagggtgcaggtctataccatctcaaccagcagaattccccgagacaccacagac
tggcagctgcagacagtacctggacccagccaggaccatgagactcccagagagacccct
agcccccagcaggccgagacccagaccccagacagcaccttcgacacactcataaaggag
gtcctgataaatggggggttggagagcttggccagggactcttgttttgtgtcggtgacg
aaacaggaaatggccgaagctttgaactttgacccggtggacatggagagttccgctact
gaccttatgaatggtcgtagagggagggtcaccacacctccaatcaggccccctcgcaga
tcacagagaaaggccaacaaattaacaaaacccaccgatcatgtttag
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