KEGG   Oncorhynchus mykiss (rainbow trout): 110528395
Entry
110528395         CDS       T07259                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X4
  KO
K11858  ubiquitin carboxyl-terminal hydrolase 48 [EC:3.4.19.12]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:omy01002]
    110528395
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110528395
Enzymes [BR:omy01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     110528395
Peptidases and inhibitors [BR:omy01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   110528395
Ubiquitin system [BR:omy04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    110528395
SSDB
Motif
Pfam: UCH UCH_1 DUSP ubiquitin Actin_micro
Other DBs
NCBI-GeneID: 110528395
NCBI-ProteinID: XP_021466104
Ensembl: ENSOMYG00000044099
LinkDB
Position
7:71160048..71182405
AA seq 1063 aa
MARHAMAPRVQLEKAAWRWVDSVRPEDIHREHIEIAYRICVPPCKRGACRRNCKGNPNCL
VGIGEHAWLGEINENSFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRR
TLYLCQNARAEEHNMDSDYEPRSICEHLQYLFALLQNSNRRYIDPSGLVKALGLDTGQQQ
DAQEFSKLFLSLLEDTLSKQKNPNLQNVIQLQFCGQMSYVTVCNQCGRASPLPSRYYELE
LNIQGHKNLTECVTEFLKEEKLDGDNRYFCESCQSKQNATRRIKLHSLPHVLNLQLMRFI
FDRQTGHKKKLNTFISFPEQLDMGPFLEGKEDEKCVYELSAVLIHRGVSAYSGHYIAHVR
DARTSDWYKFNDEEIEKMEGKKLQLGIEEDIAETVKSQTRKPKCSKGYHCSRNAYMLVYK
CHREEDTDPMETNVDVPGFLQRLVDRDNRKFEEWCLEMADMRKQSVDKGKAKHEEVKELY
ELLPAEDGQQYEFVPLEWLKKWLDDSTVTKEIDNGNFLCSHGKLHPDKVGEAKRISVKAA
ELLFDRYGGGPRLDGSTLCEECVGQRCRVLRLKNQLAEDYKEVTNLVKGPPKSDEGYWVG
KTSLRSWRQLALEQLDEDEEETKHIDGKTNGEGPEITATKEYGTENQDEDEEEMKTFNED
ILCRHGGLSILESERRLVTEEVWSKLRVYFPRAPQFTQLQEPCQQCLRLEREGKENEALN
RMMASEQKSSLLNLFQEKNRPTLTKWPQVITVSAQETDILYIVPLFFVDEWRKFIRRPTK
TTPVSSVGNSLLLCPHGGFMFTHDSMLMGDAQHIALLWPGEWEVISRHFLVDQPISICQI
SQATPNGSSVEYTTQPELCRDCREGFIFQQQRDMREYAQATVYVRKVIDDKRLMEAAPEV
NVSGSEAEDEREEPVTKVDGERDPDFSQIEDGAKRQRLSDSTIGAAASPAPMASGGKSGI
RRSTRHRKLRGEKALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGRCLTDDSATLGSL
GVIPESVICLKADEPIADYAALDDVYQVCMPEEGFKGTGLLGH
NT seq 3192 nt   +upstreamnt  +downstreamnt
atggcacgtcatgcaatggcgcctcgcgtacagcttgagaaagcagcctggcgctgggtc
gactcggtgagaccggaggacatacaccgggaacatattgagatagcttaccgaatctgt
gtaccgccgtgcaagaggggagcatgcaggaggaattgtaaagggaacccaaattgtctt
gtcggtattggggaacatgcctggttgggagagataaacgaaaacagcttccacaacatt
gatgatccaaattcagagcgccgggacaagaacacgtttgtgggtctgacgaacctgggc
gccacgtgttatgtcaacaccttcctgcaggtgtggttccacaacctggagctgcgcagg
accctgtacctgtgtcagaatgcccgggcagaggagcacaacatggactcagactatgag
cctcgcagcatatgtgaacacctgcagtacctgtttgcactgcttcagaacagcaacaga
aggtacattgacccctcggggctggtcaaggcgctagggctggacacaggacaacagcag
gacgctcaagagttctccaaactcttcctttcgctattggaggacacattatccaaacag
aagaacccaaacctgcagaatgtcatacagctgcaattctgtggacagatgtcttacgtc
actgtgtgtaaccagtgtggccgcgcttctccactgccgtcccgatactacgaactggag
ctcaacatccagggccacaagaaccttacagaatgtgtcacagagtttctcaaggaggag
aagctggacggtgacaaccgctacttctgtgagagctgccagagcaaacagaacgccact
cggcgcatcaaactgcacagcctcccacacgtactcaacctgcagctcatgcgttttatc
ttcgacagacaaacgggtcacaagaagaagctcaacaccttcatcagttttccagagcag
ctggacatgggcccgtttctggagggaaaagaagatgagaagtgtgtgtacgagctgagt
gcggtcctgatccaccgcggggtcagcgcttactcgggtcactacattgcacacgtgcga
gacgcccgcaccagcgactggtacaagttcaacgacgaggagattgagaagatggagggc
aagaagctacaactgggcatcgaggaggacatcgctgagacggtgaagtcccagacccgt
aagcccaagtgcagtaaaggataccactgctccaggaacgcctacatgctggtgtacaag
tgccatagagaggaggacactgaccccatggagaccaacgttgacgtgccaggctttcta
cagaggctggtggaccgagacaacaggaagtttgaggagtggtgcctggagatggccgac
atgcgcaagcagagcgtcgacaagggcaaggccaagcacgaagaggtgaaggaactctac
gagcttttacctgcggaagacggccagcagtatgagtttgtgcctctggagtggttgaag
aaatggctggacgactcgacggtcactaaagaaatcgacaacggcaacttcctctgttct
catggtaaacttcatccagacaaggtgggggaggccaagaggatctctgttaaagcggca
gagcttctctttgacagatacggcggaggacccagactagatgggtcaactctctgtgag
gaatgtgtgggccagagatgcagggtgctgcggctaaagaaccagctggcagaggactac
aaagaagtcaccaaccttgtcaagggcccgcccaaaagtgatgaggggtactgggtgggc
aagacgtctcttcggagctggagacagctggccttggagcagctggatgaggacgaggag
gagaccaaacacatcgacggcaaaaccaacggagagggaccagagatcactgctactaaa
gagtacggcacagagaaccaggatgaagacgaggaggagatgaagaccttcaacgaggac
atcctctgtcggcatggtggcctgagtatcctggagagcgagaggcggctggtgacggag
gaggtgtggtccaaactgagggtgtatttccccagagccccccagttcacccagctacag
gagccctgtcagcagtgcctgaggctggagcgtgaggggaaggagaatgaggctctgaac
aggatgatggcgtcagaacagaagagctccctcctcaacctgttccaggagaagaacaga
cccacactcaccaagtggccgcaggtaataactgttagtgcacaggagacggacattctc
tacatagttcctctgttttttgtggacgagtggagaaagttcatcaggaggcccactaag
accaccccagtgtctagcgtggggaacagtttgctcctttgtccccatggaggcttcatg
ttcacccatgactccatgttgatgggagacgcccaacatatagctcttctctggcccggt
gaatgggaggtgatcagcagacacttcctggttgatcagccaatctccatctgccagatc
agtcaggccacacccaacggctccagtgtggagtacaccacccagcctgagctttgtagg
gactgcagagaaggcttcatcttccagcaacagagggacatgagagagtacgcacaagcc
acagtctacgtccgcaaggtcatagacgacaagaggctaatggaggcagctcctgaggtg
aatgtgagtgggtcggaggcagaggatgagagggaggagcctgttactaaggtggatgga
gagcgagaccctgactttagccagatagaggacggggcgaagcgtcagaggctgagtgac
agcaccatcggtgctgccgcaagtccggcccccatggccagtggcggcaaatcaggtatc
aggaggagcacaaggcacaggaagctccggggagagaaagcactcatcgtctcagccaat
cagacgctcaaggagctcaaaatacaaatcatgcatgccttctctgtggccccgtttgat
cagaatctgtcgatcgacggccggtgtctaacggatgactctgccaccctcggcagccta
ggagtcatcccagagagcgtcatctgtctgaaggctgatgaacccatagcagattatgca
gcattggatgacgtttatcaggtctgtatgcctgaagaaggatttaaaggcactgggctt
ctcggtcactga

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