Oncorhynchus mykiss (rainbow trout): 110528395
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Entry
110528395 CDS
T07259
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X4
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110528395
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110528395
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110528395
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110528395
Ubiquitin system [BR:
omy04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110528395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Actin_micro
Motif
Other DBs
NCBI-GeneID:
110528395
NCBI-ProteinID:
XP_021466104
Ensembl:
ENSOMYG00000044099
LinkDB
All DBs
Position
7:71160048..71182405
Genome browser
AA seq
1063 aa
AA seq
DB search
MARHAMAPRVQLEKAAWRWVDSVRPEDIHREHIEIAYRICVPPCKRGACRRNCKGNPNCL
VGIGEHAWLGEINENSFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRR
TLYLCQNARAEEHNMDSDYEPRSICEHLQYLFALLQNSNRRYIDPSGLVKALGLDTGQQQ
DAQEFSKLFLSLLEDTLSKQKNPNLQNVIQLQFCGQMSYVTVCNQCGRASPLPSRYYELE
LNIQGHKNLTECVTEFLKEEKLDGDNRYFCESCQSKQNATRRIKLHSLPHVLNLQLMRFI
FDRQTGHKKKLNTFISFPEQLDMGPFLEGKEDEKCVYELSAVLIHRGVSAYSGHYIAHVR
DARTSDWYKFNDEEIEKMEGKKLQLGIEEDIAETVKSQTRKPKCSKGYHCSRNAYMLVYK
CHREEDTDPMETNVDVPGFLQRLVDRDNRKFEEWCLEMADMRKQSVDKGKAKHEEVKELY
ELLPAEDGQQYEFVPLEWLKKWLDDSTVTKEIDNGNFLCSHGKLHPDKVGEAKRISVKAA
ELLFDRYGGGPRLDGSTLCEECVGQRCRVLRLKNQLAEDYKEVTNLVKGPPKSDEGYWVG
KTSLRSWRQLALEQLDEDEEETKHIDGKTNGEGPEITATKEYGTENQDEDEEEMKTFNED
ILCRHGGLSILESERRLVTEEVWSKLRVYFPRAPQFTQLQEPCQQCLRLEREGKENEALN
RMMASEQKSSLLNLFQEKNRPTLTKWPQVITVSAQETDILYIVPLFFVDEWRKFIRRPTK
TTPVSSVGNSLLLCPHGGFMFTHDSMLMGDAQHIALLWPGEWEVISRHFLVDQPISICQI
SQATPNGSSVEYTTQPELCRDCREGFIFQQQRDMREYAQATVYVRKVIDDKRLMEAAPEV
NVSGSEAEDEREEPVTKVDGERDPDFSQIEDGAKRQRLSDSTIGAAASPAPMASGGKSGI
RRSTRHRKLRGEKALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGRCLTDDSATLGSL
GVIPESVICLKADEPIADYAALDDVYQVCMPEEGFKGTGLLGH
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcatgcaatggcgcctcgcgtacagcttgagaaagcagcctggcgctgggtc
gactcggtgagaccggaggacatacaccgggaacatattgagatagcttaccgaatctgt
gtaccgccgtgcaagaggggagcatgcaggaggaattgtaaagggaacccaaattgtctt
gtcggtattggggaacatgcctggttgggagagataaacgaaaacagcttccacaacatt
gatgatccaaattcagagcgccgggacaagaacacgtttgtgggtctgacgaacctgggc
gccacgtgttatgtcaacaccttcctgcaggtgtggttccacaacctggagctgcgcagg
accctgtacctgtgtcagaatgcccgggcagaggagcacaacatggactcagactatgag
cctcgcagcatatgtgaacacctgcagtacctgtttgcactgcttcagaacagcaacaga
aggtacattgacccctcggggctggtcaaggcgctagggctggacacaggacaacagcag
gacgctcaagagttctccaaactcttcctttcgctattggaggacacattatccaaacag
aagaacccaaacctgcagaatgtcatacagctgcaattctgtggacagatgtcttacgtc
actgtgtgtaaccagtgtggccgcgcttctccactgccgtcccgatactacgaactggag
ctcaacatccagggccacaagaaccttacagaatgtgtcacagagtttctcaaggaggag
aagctggacggtgacaaccgctacttctgtgagagctgccagagcaaacagaacgccact
cggcgcatcaaactgcacagcctcccacacgtactcaacctgcagctcatgcgttttatc
ttcgacagacaaacgggtcacaagaagaagctcaacaccttcatcagttttccagagcag
ctggacatgggcccgtttctggagggaaaagaagatgagaagtgtgtgtacgagctgagt
gcggtcctgatccaccgcggggtcagcgcttactcgggtcactacattgcacacgtgcga
gacgcccgcaccagcgactggtacaagttcaacgacgaggagattgagaagatggagggc
aagaagctacaactgggcatcgaggaggacatcgctgagacggtgaagtcccagacccgt
aagcccaagtgcagtaaaggataccactgctccaggaacgcctacatgctggtgtacaag
tgccatagagaggaggacactgaccccatggagaccaacgttgacgtgccaggctttcta
cagaggctggtggaccgagacaacaggaagtttgaggagtggtgcctggagatggccgac
atgcgcaagcagagcgtcgacaagggcaaggccaagcacgaagaggtgaaggaactctac
gagcttttacctgcggaagacggccagcagtatgagtttgtgcctctggagtggttgaag
aaatggctggacgactcgacggtcactaaagaaatcgacaacggcaacttcctctgttct
catggtaaacttcatccagacaaggtgggggaggccaagaggatctctgttaaagcggca
gagcttctctttgacagatacggcggaggacccagactagatgggtcaactctctgtgag
gaatgtgtgggccagagatgcagggtgctgcggctaaagaaccagctggcagaggactac
aaagaagtcaccaaccttgtcaagggcccgcccaaaagtgatgaggggtactgggtgggc
aagacgtctcttcggagctggagacagctggccttggagcagctggatgaggacgaggag
gagaccaaacacatcgacggcaaaaccaacggagagggaccagagatcactgctactaaa
gagtacggcacagagaaccaggatgaagacgaggaggagatgaagaccttcaacgaggac
atcctctgtcggcatggtggcctgagtatcctggagagcgagaggcggctggtgacggag
gaggtgtggtccaaactgagggtgtatttccccagagccccccagttcacccagctacag
gagccctgtcagcagtgcctgaggctggagcgtgaggggaaggagaatgaggctctgaac
aggatgatggcgtcagaacagaagagctccctcctcaacctgttccaggagaagaacaga
cccacactcaccaagtggccgcaggtaataactgttagtgcacaggagacggacattctc
tacatagttcctctgttttttgtggacgagtggagaaagttcatcaggaggcccactaag
accaccccagtgtctagcgtggggaacagtttgctcctttgtccccatggaggcttcatg
ttcacccatgactccatgttgatgggagacgcccaacatatagctcttctctggcccggt
gaatgggaggtgatcagcagacacttcctggttgatcagccaatctccatctgccagatc
agtcaggccacacccaacggctccagtgtggagtacaccacccagcctgagctttgtagg
gactgcagagaaggcttcatcttccagcaacagagggacatgagagagtacgcacaagcc
acagtctacgtccgcaaggtcatagacgacaagaggctaatggaggcagctcctgaggtg
aatgtgagtgggtcggaggcagaggatgagagggaggagcctgttactaaggtggatgga
gagcgagaccctgactttagccagatagaggacggggcgaagcgtcagaggctgagtgac
agcaccatcggtgctgccgcaagtccggcccccatggccagtggcggcaaatcaggtatc
aggaggagcacaaggcacaggaagctccggggagagaaagcactcatcgtctcagccaat
cagacgctcaaggagctcaaaatacaaatcatgcatgccttctctgtggccccgtttgat
cagaatctgtcgatcgacggccggtgtctaacggatgactctgccaccctcggcagccta
ggagtcatcccagagagcgtcatctgtctgaaggctgatgaacccatagcagattatgca
gcattggatgacgtttatcaggtctgtatgcctgaagaaggatttaaaggcactgggctt
ctcggtcactga
DBGET
integrated database retrieval system