Oncorhynchus mykiss (rainbow trout): 110528425
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Entry
110528425 CDS
T07259
Symbol
zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110528425 (zswim8)
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
110528425 (zswim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
110528425
NCBI-ProteinID:
XP_021466156
Ensembl:
ENSOMYG00000014877
LinkDB
All DBs
Position
1:70194295..70228504
Genome browser
AA seq
1975 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRMRAVKDPLQIGFHLSATVVSPQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMLKRRDSNAAPLLE
ILTEQCLTYEQIIGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTMSPHRRLELAAQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVESCYFNWEVAY
PLPGITYCSADKKSASFCWARAVQQQRGAKAGLAGDPPEPGGGRSGSSEGGGGDYKGRSL
QQEVAVRPKETIVSKRKGLSAGGGGGVLVRLGGSVSLSLEEGSSKGMYKGAGSSSSTGGK
AKIAQGGKSSSGGSGVVGGKHQAAKRRTSSEDSSLEPDMAELSLDDGSSLALGAEASNTF
DFTPPPPEMLPSPSPLLREPHKYSAGGKGAGNTPKERAFEGKRATLAATLPAAESQPAFP
TKENAAVIVEAAIAVVNVEAEMNGNEEAAIAGDARPSTSVVTVTAAAAKSPHDGRRETGT
GAVALPNQAPEGAAGAGGDPVGEDDYQAYFLNSANEEGAERVSENNNEEEPDIFAGIKPL
EQEGQMEVLFACAEALHAHGYSNDACRLAVELAGDLLANPPDLKVEQPQTKGKKSKVSTS
RQTQVATNTLVKTSFLLTVLSERLELHNLAFSTGMFSLELQRPPASTKALEVKLAYQESE
VVALLKKIPLGLVEMTSIRDRAEQLRDGNFCDYRPVLPLMLASFIFDVLCTPVVSPTGSR
PPSRNRNNEMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKD
DQSKLKKILDKLLDRESQTHKPQTLSSFYSSKPAASSQRSPSKHAAHTAHGHGGATGGVS
KHAPNATAAAGSSSSSLQAVATGGAAGQQAGLAGSGVQNNPTAGECVSEAREQADGVQPA
SCDQPSEAVPFKPDGTVPSRLALGGRGAYSGRCWGSPVRQKKKHTGMASIDSSAPETTSD
SSPTLSRRPLRGGWAAASWGRGQDSDSISSSSSDSLGSSSSSGSRRAGGGARAKSTDTSR
YKGRRPECHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTQPSASGGHQGPHRN
LHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLTP
PEVASLADRASRARDPNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQVHVRYSSVL
QKTHRTTHDNVMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGGSGAQREGP
GRCGANGGAGRRPPEMGHGVMDNIGNMDSSGVATVTASVTAAAVVPVISVGSTIYQSHAL
PGSAMAHPHTQGLHPYTTIQAHLPTVCTPQYLGHPLQHVPRPTVFPVSGGAYPQCVCVPS
QGMHPAFIGAQYPFSVAAGPHPPMAATAVTFPGVPVPSMTQIAVHPYHTETGLPLSTTVA
GAASFSPFYPVGGVHSGATIQAIQGSSLPGMSSQPVSLVSAPFPSEDEQHSQPISQQGLH
YLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVNYVYQFCVGA
AKGVLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQYIHHRLIHLTPA
DYDDFVNIIRSARGAFCLTPVGMMQFNDVLQNLKRGKQTKELWQRISLEMATFSP
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atggaactaatgtttgccgagtgggaagacggagagaggttctccttcgaagattctgac
cggttcgaggaggactcgctctgctctttcatatcagaggctgagagtctgtgccagaac
tggaggggatggagaaaacagtctgctggaccaaattctcctacagtgaagattaaagat
ggtcaggtcatccctctggtggagctatcagccaagcaggttgcattccacatcccgttt
gaggtggtggagaaggtctaccctcctgtccccgagcagctgcagctccgcatcgcctac
tggagcttcccagagaacgaggaggacatccggctgtactcgtgtctggctaacggcagc
cctgatgagttccagcgaggggagcagctgtacaggatgagggctgtcaaagaccctctg
cagataggtttccacctcagtgccaccgtggtgtcgccccaggctggccaatcaaaaggg
gcgtacaatgtggctgtcatgtttgaccgctgccgcatcacttcctgcagttgcacctgt
ggagccggggccaaatggtgcgcccatgtggtggccctctgcctcttcaggatccacaac
gcgtctgcagtctgcttgcgagcccccgtgtcagagtccctgtcccggctgcagagggac
cagctgcagaagtttgcccagtacctcatcagtgagcttccccaacagattttgcccaca
gcccagaggcttctggatgagctcctgtcctcccagtctacagccatcaacacagtgtgt
ggtgctcccgaccccactgctggcccctcagcctctgatcagagcacctggtatctagat
gagtcaacgctcagtgacaacatcaagaagactctgcacaagttctgtggcccctctcct
gttgtcttcagtgacgtcaactccatgtacctgtcatccacggagcctccggcggcggca
gagtgggcatgtctgctgaggccgctgagggggcgggagcctgagggcatctggaacctc
ctttccattgtcagggagatgctcaagaggagagacagcaacgctgcacccctactagag
atcctcactgagcagtgtctcacttatgaacagatcattggctggtggtacagcgtgcgt
acttcggcatcccacagcagtgccagcgggcacacggggcgcagtaacgggcagtcggag
gtggcagcccacgcctgcgccagcatgtgtgacgagatggtcgttctgtggaggctggct
gtcctagaccccaccatgagccctcataggcgtttggagctggctgcccagctcaagcag
tggcatctgaaagtgattgagatcgtgaagcgaggacaacaccgcaagtccctggacaaa
ctgttccagggcttcaagccagccgtggagtcctgctacttcaactgggaggtggcctac
ccactgccaggcatcacctactgcagtgcagacaagaagagcgcttccttctgctgggcc
agggcagtgcagcagcagagaggggccaaggctggcctggctggagacccccctgaacct
ggaggagggagatctggcagctctgagggaggtgggggagactacaagggcagaagtctc
caacaagaagtggcggtcaggcccaaagagaccatcgtgagcaagaggaaggggttgtcg
gctgggggcggaggaggggtcctagtgcggctagggggcagtgtgtctctctctctagag
gagggcagtagtaaggggatgtacaaaggcgcaggttcctcctcgtccactgggggcaag
gctaagatagcccaggggggcaagtcatcctctgggggatcaggagtggtagggggaaaa
caccaagcggccaagcggcgcaccagcagtgaggacagctccctcgagcctgacatggcc
gagctgagcctggatgatggctccagtctggctctgggtgctgaggccagcaacaccttt
gacttcacacccccgccgcctgagatgctgccctcaccaagcccgctactcagagagcca
cacaaatacagtgcgggagggaaaggggccggaaacacgcccaaggagcgtgccttcgag
ggcaaacgggccacccttgctgccaccctgcctgccgctgaatcccagcccgccttcccc
accaaagagaacgctgctgtcatcgtggaagcagccattgccgtggtgaatgtggaggcg
gagatgaatggaaatgaggaagcggccatcgctggagatgctcggccctctacctcggtt
gttaccgtgactgcagctgccgccaagtcaccgcatgatggccgccgagaaactggcact
ggagccgtagcactgcccaatcaggccccagagggagcagcaggggcaggaggagaccct
gtaggagaggatgactaccaggcctactttctgaattcagctaatgaggagggggcagag
agagtgtcggagaacaacaatgaggaggaaccagacatctttgctgggatcaagccactg
gagcaggagggccagatggaggtgctgtttgcgtgtgcagaggccctccacgctcacggc
tacagcaacgatgcctgcagactggcagtggagctggctggagacctgctggccaaccct
ccagacctgaaggtggagcagccccagaccaagggcaagaagagcaaggtgtccaccagc
aggcagacccaggtggccactaacacgttggttaagacctccttcctgctgacggtgctg
agcgagaggctggagctccacaacctggccttcagcacgggtatgttctctctggagctg
cagaggcccccagcctccaccaaggccctggaggtcaagcttgcttaccaggagtcagag
gtggtggctctgctgaagaaaatccctctgggcctggtggagatgacgtccatacgggac
agggccgagcagctccgagatgggaacttctgtgactacaggcccgtcctgcccctcatg
ctggccagcttcatatttgatgtgctgtgtaccccagttgtgtcccccacaggttcccgt
ccgcctagccgtaaccggaacaacgagatgcctggagatgaagagctgggctttgaggcg
gctgtagcagcactgggtatgaagaccacagtgagcgaggcagagcatcctctgctgtgt
gaggggaccaggagagagaaaggagacttggctctggccctcatgatcacatacaaggat
gaccagagcaagctgaaaaagatcttggacaagctgctggacagagagagccagacccac
aagccccagaccctgagctctttctactccagcaagccagctgccagcagccaaaggagc
ccgtccaagcatgctgcccacactgctcacggacacggaggtgccacaggaggggtgtcc
aaacatgcccccaacgccacagctgcagccgggtcctcctcctcctccttgcaagcggtg
gctactgggggggcggcaggacagcaggcaggtctggcaggcagtggggtgcagaacaac
cccacagccggagagtgtgtcagtgaggccagagagcaagcagatggcgtccagcctgcg
tcatgtgaccagccgagtgaggctgtcccattcaagccagatggcacagtgccgagccgc
ttggcgctgggaggacggggggcatacagcgggcgctgctggggctctcctgtccgccag
aagaagaaacacacaggcatggcgagtatcgacagcagtgctcctgagaccacctcagac
agctcccccacccttagtcgacgcccgctcagagggggctgggctgcagcttcctggggg
aggggccaagacagtgacagcatcagcagctcctcttctgattcgttaggctcctcctca
tccagtggctctcgcagggccggaggcggagctagggcaaagagcacagacaccagcaga
tataaaggacgtcgtcccgagtgccatgcaccacatgtgcccaaccaaccgtctgaggcg
gcggcccacttctatttcgagctggccaagaccgtgctgatcaaggccgggggcaacagc
tccacctccatcttcacccagccctcagccagtggaggccaccaggggccccaccgcaac
ttgcacctctgtgcctttgagatcggcctgtacgccctaggcctgcacaactttgtctca
cctaactggctctccaggacctactcctcccacgtctcctggatcacaggccaggccatg
gagatcggcagtgctgccctcaacatcctggtggaatgctgggacgggcacctcacccct
cccgaggtggcatcactggccgacagagcatcacgggcgcgggaccccaacatggttcgc
gctgcggctgagctggcccttagctgcctgccccatgcacacgccctcaaccccaatgag
atccagagggccctggtgcagtgcaaggaacaggtacatgtccggtactcttcagttctg
cagaagacacatcggactactcatgacaacgtgatgctagagaaagcctgtatggctgta
gaggaggcagccaaggggggcggtgtgtaccctgaggttctgtttgaggtggcccaccag
tggtactggctctatgagcagacagtaggaggggggtcaggggcccagcgtgaaggcccg
ggacgctgtggggccaacggcggagctggaaggaggcccccagagatgggccacggtgta
atggacaacattggcaacatggattcctccggcgtcgccacggtgacggcctcagtgaca
gcagcggctgtggtgcccgtcatctctgtgggctccaccatctaccaatcacacgccctt
cccggctcggccatggcccacccccacacccagggcctgcacccctacaccaccatccag
gcccacctacccacagtctgcaccccccagtacctggggcacccactgcagcacgtcccc
cggcccactgtattccccgtgtcagggggtgcctacccacagtgtgtctgtgtgccctct
cagggaatgcacccggcctttatcggtgcccagtacccgttctcagtggccgctggcccc
catccgcccatggcagcgacagcggtcaccttccccggtgttcccgtgccgtccatgacc
cagatcgccgtccacccctatcacaccgagaccggcctgcctcttagcaccactgtagca
ggagccgcatctttttcccctttctatccagtaggtggcgtccattcaggcgccacaatc
caggccattcaggggtcatctcttcctggaatgtcttctcagcctgtctcattggtcagt
gcccccttcccgtctgaagacgagcagcatagccagccaatcagccagcagggccttcac
tacctgcactcagcatacagagttggcatgctagcattggagatgctgggcaggagggct
cacaacgaccaccccaataacttctcccgcagccccccatacacagaggacgtcaagtgg
ctcctgggcctggctgcacggctaggggtgaactacgtgtaccagttctgtgtgggtgcg
gctaagggtgtgctcagccccttcgtccttcaggagatcatcatggaggctctccagaga
ctgaaccccgcccacatccatgcccacctccgcacgcctgccttccaccaactggtgcag
cgctgccagcaggcctacctacagtacatccaccaccggctgatccacctgaccccggcc
gactacgacgactttgtcaacatcatccgcagcgcccgtggggctttctgcctgacacct
gtgggcatgatgcagttcaacgacgtgctgcagaacctgaagaggggcaagcagaccaag
gagctgtggcagcgcatctctctggagatggccaccttctccccatga
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