KEGG   Oncorhynchus mykiss (rainbow trout): 110528452
Entry
110528452         CDS       T07259                                 
Name
(RefSeq) ubiquitin-associated protein 2 isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110528452
   03400 DNA repair and recombination proteins [BR:omy03400]
    110528452
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    110528452
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     110528452
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 GIP1_N
Other DBs
NCBI-GeneID: 110528452
NCBI-ProteinID: XP_036839928
Ensembl: ENSOMYG00000010004
LinkDB
Position
7:complement(72778129..72806664)
AA seq 1298 aa
MSVRRVLIFLFCTYIVLYILYMMTSLGGDKARGTRDKVLPAATHTTQPQKQLQATAEQIR
LAQMIYDKNDSDFEDKVNQLMEVTGKNQDECMVALHDCNEDVNRAINFLLESTSDTTSWE
TVGKKKPLAKEGPAEGKENREKRGGEREVSRGRGGSNRRGRGASNRSRQGERVRPEENGV
EAVPVDRGSERGRRGGRGGRGECHLVALSHMFQSTLPVGSGGRGRGRVPAGSRFSAQGMG
TFNPADYTAEQRTGTTQDDSWESGAINSTDGTVAWRSTLEDWAAEDWSEDLSETKVFTAS
SAPAPQNHIIPGQSLDHASMLQKPVGGEEAPSSQSLVFTNSHHHPARNGSAVGTGSTSYA
HAALSSVLGAGFGDLGQSKRSQSSPGAQILEQLKGPGLGPLPSSQAAPPPSTQGTSSTSL
GSRLPGLGVAPPVLPPPSTSSWDIKTPEPSTTTTSLTSHFSREFRLQPEPSLVLSHLVQR
HGAPSLPLACQSSPPPAQSPSPSQGPPLAAIGAKPAPSAGPDPQGSSSLQQQHRVPQLKA
QKRRIPPTSKIPSSAVEMPGSADIPGLNVQFGALDFGSEATLPDFGPVETCVSVASRAPA
PQSQTNLYSKPLSESMGTPLSIPLPLSSSEPIYHSPSVAMPSLAPSAMGMVSSSTPSSSI
SSSVPSSSSTSPFVSLGSGYDCGPVAPHSRLAFSQSKEAPGPIMNGLNSVRTSAMDTSSA
SSTPKPESPSPSISTSSAPAPSALMPSSIPPHSSALPSLPHDMPSASLATLSSHGSSSHS
SVLGSSSLTYTSVDSSVSSLAPSSGSYSTGQAPAQSLHQAQSLHQAQSLHQAQSLHQAQA
QSLHQAQAQSLHQAQAQSLHQAQAQSLHQAQAQSLHQAPAQSLHQVNSSMAHIMGTMSHM
NSMVSSMGGTSGLHASQALGLSANGTTAQSNLSSAPRTAPLLSSSTGKAHPNLSQGGPPL
LPNQYIMGPGGLLPAYPQIYGYEDLHMLQSRLPMPSLQDYYGITFPGPTALSGRDGSLAN
NPYSGEVTKFGRGDSTSPAPPSNLSAQQQPQQGQTQAQPQPPQPQGQPQPQGHHSSQQQQ
AFLPPGYSYTGLPYYPGMPGAAFQYGHTMFMPQGQGPAKQHGVGLGNPSASPFQQQPSGY
GQHTFSSGYEDLTQGQAGVDYSKGYSNSSQSQAKSAATGAGKGGISVTSGNTGIPEISGS
VYNKTQSFDKQGFHTGTPPPFNLPSALGGPGGAPGGYAPAPFLHILQPAHQQPHSQMLHH
HLAQDGQGGPSQRGQSSSIQQKSQVNKSSYGSSPYWGN
NT seq 3897 nt   +upstreamnt  +downstreamnt
atgtccgttcgtcgtgttttgatttttctattttgtacatacattgttttgtatatactg
tatatgatgacctcgttgggtggcgacaaagcccggggcactcgggataaagtgctgcct
gctgccacccacacaactcaaccacagaaacagctccaggcgaccgcagagcaaatccgg
ctcgcccagatgatctatgacaagaacgattctgattttgaggacaaagtgaaccagctg
atggaggtgaccggaaagaaccaggacgagtgcatggtagcgctccacgactgcaacgag
gatgttaacagagccatcaacttccttcttgagagcacctctgacacgacctcatgggag
acagtggggaaaaagaaacccctagcgaaggaaggccctgcggagggcaaggagaaccgg
gagaagagaggaggagagagggaggtcagcaggggccgcgggggaagcaaccggcgaggc
agaggggccagcaatcgcagccgccagggggagagagtgcggccagaggagaatggtgtg
gaagcggtccctgtggacagagggtcagagcgaggccgcaggggtgggagagggggtaga
ggtgagtgtcatttagtggcactttctcatatgttccagtcaacactcccagtcggatct
ggaggcagaggaaggggcagggtgccagcgggaagcaggttctcagcccagggaatgggg
acctttaacccagcagactacactgcagaacagaggacagggaccacacaagatgactcc
tgggagtcaggagccatcaacagcacagacgggacagtggcctggaggagtactctggag
gactgggctgctgaggactggagcgaggatctctctgagaccaaagtgttcactgcctca
agtgcaccggcacctcagaaccacatcatacctgggcaaagcctggaccatgcgtctatg
ctgcagaagccagtgggaggagaagaggcaccctcctctcagagcctggtcttcacaaac
tcccaccatcaccccgcccgcaacgggtcggccgtcggcacaggcagtaccagctacgca
catgccgccctgtcgtcagtgctgggggcaggttttggggacctgggtcagtctaagagg
agtcagtccagtccaggggcccagatcttggagcagctgaagggcccaggcctgggtcct
ctcccctcctcccaggcagccccccctcccagcacacaggggaccagcagcacctcgctg
gggagtagactcccagggttaggagtagcgcccccggtcctccctccgccttccacttcc
agctgggacatcaagaccccagagcctagcaccaccaccacctcactcacctcccacttc
agccgggagtttagactgcagcctgagccgtccctggtgctgagccatctagtccagaga
cacggcgccccctctctgcccctggcgtgccagtccagccccccgccagcccaatccccc
tcccccagccagggaccccccctggccgccatcggtgccaagcctgcccccagcgcaggg
ccggaccctcagggcagcagctcgctgcagcagcagcaccgcgttcctcaactaaaggct
cagaaacgaaggatacctcccacctccaagatcccttcgtcggcggtggaaatgcccggc
tctgccgacatccccggtctcaacgttcagttcggagcactggactttggctcggaggcc
accctgccggactttggccccgtggagacatgtgtcagcgtggcctccagggcccccgcc
ccacagagccagaccaacctctattccaaacccctcagtgaatctatgggcacccctctt
tctattcccctccctctgtcctcctctgagcccatctaccactccccgtcggtggccatg
cccagcctcgccccctccgctatgggtatggtcagctcctccactccctcctcctccatt
tcctcctcagtgccctcctcctcctccacttctcccttcgtctcactgggaagcggttat
gactgtgggcctgtggcccctcactcacgcctggccttctcccagagcaaagaggccccc
ggaccaatcatgaacggtctgaacagtgtgaggacgtctgcgatggacacttcatcagcc
tcctccactccaaagccagaatctccctctccgagcatcagtaccagcagtgctcctgcc
ccctctgccctcatgccctcctccatacccccccacagctcagcacttcccagtctgcca
catgacatgccctctgccagcttggccacactgagcagtcatggcagcagtagtcattcc
tcagtgctcggctccagctctctcacttacaccagtgtggacagtagtgtgagctctctg
gcgccctcgtctggctcctactcaactggccaggccccggcccagtcgctgcaccaggcc
cagtcgctgcaccaggcccagtcgctgcaccaggctcagtcgctgcaccaggctcaggct
cagtcgctgcaccaggctcaggctcagtcgctgcaccaggctcaggctcagtcgctgcac
caggcccaggctcagtcgctgcaccaggcccaggctcagtcgctgcaccaggccccggcc
cagtctctgcaccaggtcaacagcagcatggctcacatcatgggcaccatgagccacatg
aacagtatggtcagtagcatgggtggcaccagcgggctacacgccagccaagcactgggg
ctcagcgccaatggaaccacagcccaatcaaacctctcctcggcccccaggaccgcacca
ctgctctcctcctcaactggtaaagctcatcctaacctgtcccagggagggcccccacta
ctacccaaccagtacatcatgggcccaggaggcctgctgccagcctacccgcagatctat
ggctatgaggacctccacatgctgcagtccagactgcctatgccctctttgcaggattat
tatggaatcacattccctggccccacagcactctctggcagagatgggagcctcgccaat
aacccctactcaggtgaagtcacaaagtttggcaggggtgactccacctcccctgcaccc
cccagcaacttgtcagcccaacagcagccccaacaaggccagacccaggcccagcctcaa
ccccctcagcctcaaggccagccccagcctcagggccaccacagcagccagcagcagcag
gccttcctcccgccgggctacagctacacgggcctgccctactatcccgggatgcccggc
gctgccttccagtacggccacaccatgttcatgccccagggacaagggccagccaaacag
catggtgtgggtctgggtaacccctcagcaagccccttccagcagcagcccagcggctac
ggccagcacacttttagctcagggtatgaggacctgacccagggccaagcaggggtggac
tacagcaaaggctacagcaactcatcccagagtcaggccaaatctgctgctacaggtgct
ggtaaaggcggcatctctgtgacgtcaggcaacaccgggatcccagaaatcagtggcagt
gtttacaacaagacccagtcctttgataagcagggtttccatacggggactccccctccc
ttcaacctgccctcagctctggggggtcctggaggggccccagggggctatgctcctgcc
cccttcctccacatcctgcagcctgcccaccagcaaccccactcccagatgctgcaccat
cacctggctcaggacggacagggcggtcctagccagcgaggccagtctagcagcatccag
cagaagagccaggtcaacaagtccagctatggcagctccccatactggggcaactga

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