Oncorhynchus mykiss (rainbow trout): 110528476
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Entry
110528476 CDS
T07259
Name
(RefSeq) plexin-A1 isoform X1
KO
K06820
plexin A
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110528476
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plexin_cytopl
TIG
Plexin_RBD
TIG_2
Sema
TIG_plexin
PSI
PSI_PlexinA-B
RasGAP
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
110528476
NCBI-ProteinID:
XP_021466243
Ensembl:
ENSOMYG00000014961
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All DBs
Position
7:complement(74212515..74601110)
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AA seq
1891 aa
AA seq
DB search
MWPLLRSLVAPRLGNLLLLGVLVLLTVPSLTRGQPQPFKSFSPPDWGLTHLAIHNKTGEV
YVGTVNWIFKLSSNLTKLRSHMTGPVADNEKCYPPPSVQSCPHDLAQTNNVNKLLLIDYA
QNRLIACGSTSQGICQFLRLDDLFKLGEPHHRKEHYLSSVTESGTMSGVIITSQHSPASK
LFIGTPIDGKSEYFPTLSSRKLMSNEENADMFSFVYQDEFVSSQLKIPSDTLSKFPAFDI
YYIYGFSSEHFVYYLTMQLDTQLTSPDASGEQFFTSKIVRLCVDDSKFYSYVEFPIGCTK
DGVEYRLVQDAYLSRPGKQLADSLGISEDEDILFTVFSQGQKNRAKPPKESALCLFTLRR
IKEKIKERIQSCYRGEGKLSLPWLLNKELACINSPLQIDDNFCGQDFNQPLGGTSTIEGI
PLFIDKEDGMTSVAAYDYHGNTVAFTGTRNGRMKKILVNSVSPTHPALLYENLVVSDGFS
PILRDLLFSPDLQHIYILSDKQVSRVPVESCEQYTTCGQCLGSKDPHCGWCVLHNMCSRK
DRCEKADEPQRFASDQHQCVELSVHPKNISVTMSQVQLVLEARNVPDLSAGVNCSFEGYV
ETDGHIQGSLIYCLSPSAHNVIPITRNKGDKRMVKLYLKSKETGKTFAGVDFVFYNCSVH
SSCLSCVNGSFPCHWCKYRHICTQNASDCSFQEGRVNMSEDCPQILPSTQIYIPVGVTKP
ITLAACNLPQPQSGQKNYECVFHVQGEEHSVTALRFNSTSIQCQKTSYNYEGNDISDLPV
DLSVVWNGNFVIDNPFNIQAHLYKCPALRDSCGMCLKADPRFECGWCVQEKKCSLRQECV
PLESSWMHATTGNSRCAHPKISKLSPETGPRQGGTMLTITGENLGLQFKDIQTGVRIGKV
ACTPVEAEYISAEQIVCKLADATGYRVQEAHVEVCVRDCTHTDYKVVSPKAFTFVSPYFT
RVQPSKGPLSGGTRITIEGSHLNAGSAVAVKIGLHPCRFERRSAREMVCVTPAGQSPGGT
PVMVDINSAELRNPEVKFNYTDDPTIFKIEPDWSIASGGTMLTVTGTNLATIKEPKMRAK
YGKVQSVNNCTVLSNTVMMCLAPSLAFSEKGFSETGTNPDEIGFVMDNVRATLVVNETFS
FYPDPVIEPLSSTGLLELKPSSPLILKGKNLIPAAPGNSRLNYTVLIGEKPCVLTLSESQ
LLCEWPNLTGEHKVTVRVGGFEYSPGTLQMYSDSLLSLPAIIGIGGGGGLLLLVIIAVLI
AYKRKSRDADRTLKRLQLQMDNLESRVALECKEAFAELQTDIHELTQELDGTGIPFLEYR
TYAMRVLFPGIEDHPVLKEMEVQANVEKGLTLFGQLLTKKHFLLTFIRTLEAQRSFSMRD
RGNVASLVMTALQGEMEYATGVLKQLLSDLIDKNLESKNHPKLLLRRTESVAEKMLTNWF
TFLLYKFLKECAGEPLFMLYCAIKQQMEKGPIDSITGEARYSLSEDKLIRQQIDYKTLTL
HCVNPENENAPEVAVKGLNCDTVTQVKEKLLDAVLKGSPYSQRPKASDMDMEWRQGRMAR
IILQDEDVTTKIDNDWKRLNTLAHYQVTDGSVIALVPKQNSAYNISTSSTFTKSLNRYES
MLRTASSPDSLRSRTPMITPDLESGTKLWHLVKNHDHSDQREGDRGSKMVSEIYLTRLLA
TKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADKHCISDLDVRHTWKSNCL
PLRFWVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHKLGKDSPSNKLLYAKD
IPNYKNWVERYYSDISRMPVISDQDMSAYLAEQSRLHLSQFNSMSALHEIYSYIVKYKDE
ILTALERDEQSRRQRLRSKLEQVINTMALAS
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atgtggcccctattgaggtcactcgttgcccctcgcctggggaacctgctccttctgggg
gtgctggtcctcttgacagtcccgtccttgaccagaggtcaaccccagcccttcaaatcc
ttctccccaccagactgggggctgacacacctggccattcacaacaagacgggtgaggtt
tacgttggcacggtcaactggatcttcaagctctctagcaaccttaccaagctgcggagc
cacatgactggccccgtggcggataacgaaaagtgctatcccccgcccagcgtccagtcg
tgcccccacgaccttgcccagaccaacaacgtcaacaagttgcttctcatcgactatgcc
cagaaccgactcatcgcctgcgggagcacctcccagggaatctgtcagttcctcaggctg
gacgacctgttcaaactgggtgagccgcaccaccgtaaggagcactacctgtccagcgtg
accgagtctggcaccatgtctggggtcatcatcacatcccagcacagccccgccagcaag
ctcttcatcggcacacccattgacggcaagtccgagtacttccccacgctctccagccgc
aagctgatgtccaacgaggagaacgctgacatgttcagctttgtctatcaggatgagttt
gtctcctcgcagctcaagatcccttcggacactctcagcaaattccctgcatttgacatc
tactatatctacggcttcagcagcgaacattttgtctactacctgaccatgcagctggac
actcagctcacttcgcctgacgcctctggtgaacagttcttcacatccaagattgtccgc
ctctgtgtggacgactcaaagttctactcgtacgtggagttccccatcggctgcaccaag
gatggggtggagtatcgtctcgtccaggacgcctacctcagccgtcccggcaagcagttg
gctgactccttaggaatttccgaagacgaggacatcctgttcactgtgttctcgcagggc
cagaagaaccgggccaagccacccaaggagtcagccctgtgcctgttcacactgcgccgc
atcaaggagaagatcaaggagcgcatccagtcctgctaccggggagaggggaagctctca
ctaccctggctgctcaacaaggaactggcctgcatcaactcacctctccagatcgatgac
aacttttgcggccaggactttaaccagccgctgggtgggaccagcaccatagaaggaata
ccgctcttcatcgacaaggaggacggcatgacctcggtggccgcttacgattaccacggc
aacaccgtggccttcacaggcacacgcaacggcagaatgaagaagatcctggttaactca
gtgagtcccacgcatcctgctctgctctatgagaacctggttgtgagtgatggcttcagc
cccatccttcgagacctgctcttctctcctgacctccagcacatctacatactctccgac
aaacaggtgagcagggtaccagtagagagctgtgagcagtacaccacctgtggccagtgc
ctgggctccaaagacccccactgtggctggtgtgtcctccacaacatgtgttcccgtaag
gacagatgtgagaaagcagatgaaccccagcggtttgcctcagaccagcatcagtgtgtg
gagctcagtgttcaccccaagaacatctccgtcaccatgtcccaagtccagctcgtgctg
gaggcgcgtaacgtccctgacctctctgcgggagtcaactgctccttcgagggttacgtg
gagacggatgggcacatccaggggagcctcatctactgcctgtccccctcggcccacaac
gtcatccccattacccgaaacaaaggagacaagcgcatggtgaagctctacctcaagtcc
aaggagacaggcaagacgttcgccggcgtggactttgtattctacaactgcagcgtgcac
tcgtcgtgcctgtcgtgtgtgaacggttccttcccgtgccactggtgtaagtaccgtcac
atctgcacccagaacgccagcgactgctccttccaggagggccgcgtcaacatgtccgag
gactgtccccagatcctgccctctacccagatttacatccctgtgggtgtgaccaagcca
atcaccctggccgcctgcaacctgccccagccccagtctggccagaagaactacgagtgt
gtgttccacgtgcagggagaggagcatagcgtcaccgcactgcgcttcaacagtaccagc
atccagtgtcagaagacctcgtataactatgagggtaatgacatcagtgacctgcccgtg
gacctatctgtggtgtggaacggcaactttgtcatcgacaaccccttcaacatccaagct
cacctgtacaagtgccctgctttgagggacagctgtggcatgtgtctgaaggctgacccc
aggtttgagtgtggctggtgtgtccaggagaagaagtgttctctgaggcaggagtgtgtc
ccgctggagagtagctggatgcatgccaccaccggcaacagccgctgtgcccaccccaag
atcagcaagttgtctccagagacgggtcccagacagggtggaaccatgctgaccatcacg
ggggagaacctgggtctgcagttcaaggacatccagacgggggtccgcatcggcaaggtg
gcctgcacccccgtggaggcagagtacatcagcgctgaacagatcgtgtgtaagctggct
gatgcgacaggttaccgtgtgcaggaggctcatgtggaagtatgtgtgagggactgcaca
cacaccgactacaaagtcgtctcacccaaggccttcacttttgtgtctccctatttcaca
cgggtacagccctccaagggccccctctcggggggaactcgcatcaccattgaggggagc
cacctcaacgctggcagcgctgtggcggtcaagatcggcctccatccctgccgcttcgag
aggcggagtgccagggagatggtgtgtgtgaccccggcgggtcagagtcctggaggtacc
cccgtcatggtggacatcaactcagctgagctcagaaacccagaggtcaaattcaactac
accgatgaccccaccatcttcaagatcgaacctgactggagcatcgctagtggcggcacc
atgttgaccgtcaccggcaccaacctggctaccatcaaggagcccaagatgagagccaag
tatgggaaagtccaatctgtcaacaactgcacagtgctcagcaacaccgtgatgatgtgt
ctggcgccctctctggccttctctgagaagggtttctcagagacaggcactaatcccgac
gagatcggcttcgtcatggacaacgtgcgcgccacgcttgtggtcaatgagacgttcagc
ttctacccagaccctgtgatcgagccgctcagttccacggggctgctggagctcaagccc
agctccccgctcatcctcaagggtaagaacctgatcccggcagcccctggtaactctcgt
cttaactacacggtgctgatcggtgagaagccctgtgtcctcaccctgtcagagagccag
ctgctctgtgagtggcccaacctcaccggagaacacaaagttaccgtacgtgtgggggga
tttgagtactcccccggtaccctccagatgtactctgacagcctgctcagcctgcctgcc
atcatcggcattggagggggcggtggcctgctgctattggtcatcatcgccgtgctcatc
gcttacaagaggaagtcacgggatgccgaccgcacgctgaaacgcctgcagttacagatg
gacaacctggagtctcgagtggcgctggagtgcaaggaggcctttgcagagctgcagaca
gacatccatgagctgacccaggagctggacggaacaggcatccccttcctggaatacagg
acctacgccatgagggtcctcttccccgggatcgaggaccaccctgtgctcaaagagatg
gaggtccaggccaatgtggagaagggtctcaccctgttcggccagctgctcaccaagaag
cacttcctgttgacctttatccgcacgctggaggctcaacgctccttctccatgcgcgac
cgcggcaacgtggcatcgctggtcatgactgcgctccagggagagatggaatacgccaca
ggggtgttgaagcagctgctgtctgacctcattgacaagaacctggagagcaagaaccac
cccaagctactgttgagaaggacggagtcggtggctgagaagatgctcaccaactggttc
acgttccttctctacaagttcctcaaggagtgtgctggggagccgctgttcatgctgtac
tgtgccatcaagcagcagatggagaaggggcctatagactccatcacaggagaggcgcgc
tactcgctcagtgaggacaagctcatcagacagcagattgactacaagaccctgacccta
cactgtgtgaacccggagaatgagaacgccccggaggtggcggtaaaggggctgaactgt
gacacggtgacccaggtgaaggaaaagctgcttgatgctgtgttgaaaggaagcccttac
tcccagagacccaaggcttcagacatggacatggagtggcgtcagggaaggatggccagg
atcattctccaggatgaggacgtcaccaccaagatagacaatgactggaagagactcaac
acactggcccactaccaggtgacggatggctcagtgatagccctcgtgcccaagcagaac
tctgcctacaacatctccacctcctccaccttcaccaagtccctcaacagatacgagagt
atgttgaggacggccagtagtccagacagcctgcgttctaggacccccatgatcacgcct
gacctggagagtggtaccaagctgtggcacctggtcaagaaccacgaccactcggaccag
cgtgagggcgaccgtggcagcaagatggtctctgagatatacctgaccaggctattggct
actaagggtacattgcagaagtttgtggacgacctgtttgagaccatcttcagtacggcc
catcgaggcagtgccctgccgcttgccatcaagtacatgtttgacttcctggacgagcag
gccgacaagcactgcatctctgacttggatgtacggcacacctggaagagcaactgtctt
cctctgcggttctgggtgaacgtgatcaagaacccccagtttgtgttcgacatccacaag
aacagcatcacggacgcctgtctgtctgtggtggcccagaccttcatggactcctgctcc
acctcagaacacaagctgggcaaagactcaccctccaacaagctgctctacgctaaagac
attcccaactacaagaactgggtagaacggtactactccgacatctcgcggatgcccgtc
atcagtgaccaggacatgagtgcgtacctggcggagcagtcgcggctgcacctcagccag
ttcaacagcatgagcgccctgcatgagatctactcctacatagtcaagtacaaggacgag
attctgacggctttggagagggacgagcagtcgcggaggcagagactgaggagcaagctg
gagcaggtcatcaacacaatggccctggccagctga
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