Oncorhynchus mykiss (rainbow trout): 110528482
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Entry
110528482 CDS
T07259
Name
(RefSeq) homeobox protein TGIF1 isoform X1
KO
K19553
homeobox protein TGIF2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
110528482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110528482
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
110528482
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
110528482
NCBI-ProteinID:
XP_021466257
Ensembl:
ENSOMYG00000015795
UniProt:
A0A8K9VGA4
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All DBs
Position
7:complement(74829699..74837226)
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AA seq
451 aa
AA seq
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MKPLKRALEEEQIRELSSAMSDSDPFEDDGFPLDLSGGGVASGKRRRRGNLPKEAVIVLR
TWLYEHRYNAYPSEQEKLSLSDQTSLSVLQICNWFINARRRLLPDLLRKDGKDPTHFTIS
RRAGKGEGRSSTGGGGSSPESPTSSVPSPALPPLRPSVIRPAPTLDLSLLGNTATAILTG
AGYPGQEGCCVQALMQLDMHVLLREVEEKGSTVISASPIGGLFNTPPPTPPELCPGQDFS
DLRLLVDAALQRAAEHESQTKATTEATVCSSAMGLTLPPEPSQATLSPTEKAVVSAVSVP
SPGTVSSAPKLTPALSFIPAPSLPPRQAKIPVLVPVSTSVPTFIPAPIKPPVSALSPVQT
FTPSLTLSPVPVSSPTLALVQAPPPALTPFLGLSSSIPSSSSFQRAQSVASVWSMVHSDV
PVRQPGPVAQTPIATVWGAQHTLHAVSETVN
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccctaaaacgagctctggaagaggagcagatacgggagctgtcgtcagccatg
tctgacagcgacccctttgaggatgacggttttccccttgacctgtcagggggcggcgtg
gcctcgggtaagcggcgtcgccgcggcaacctgcccaaggaggcggtgattgtgctgcgg
acctggctgtatgagcaccgctacaacgcctacccttcagagcaggagaaactcagcctg
tcagatcagaccagcctctccgtgctacagatatgcaactggttcatcaacgcccgtcgc
cgcctcctccctgaccttctccgcaaggacggcaaagaccccacccatttcaccatctcc
aggcgggcaggaaaaggtgagggtcgctcatccactggtggtggaggtagctcccctgaa
agccccacctcctcggtcccctcaccagccctgcccccactccggccctcggtcatccgg
ccagcccccacgctggacctcagcctccttggcaacacagccacggccattctgacggga
gccggctacccaggccaagagggctgctgcgtccaggccctgatgcagctggacatgcac
gttctcctgagggaggtcgaggagaagggctctacggttattagcgccagtcccattggc
gggctattcaacacgccaccccccacccctccggagctgtgccccggccaggacttcagt
gacctgaggctgctggtggacgcagctctccagagggccgctgagcatgagagtcagacg
aaggccactacagaggccacggtctgcagcagtgctatgggtctgacccttccaccagag
ccgagccaagctacgctgagtcccacagaaaaggctgtggtgtccgcagtttcagtccca
agccccggcacggtctcttcagcacctaaactcaccccagccctttccttcattcctgcg
ccaagtctgcctcctcgccaggccaaaattccagtcctagtgccagtttcaacctctgtc
ccaacattcatcccagcaccaatcaaaccccctgtgtcagccctaagccctgttcaaacc
ttcaccccatcactaactttatcccctgtcccagtctcatccccaactttagccctagtc
caagcacctccgccagccctcaccccattcctaggcctttcttcctccatccccagcagc
agcagtttccagagggcccagtcggtggccagtgtgtggagcatggtccacagcgatgtt
ccagttcgacagcctggtcccgtggcacagactcccatagccacagtgtggggggcgcag
cacaccctgcatgctgtcagcgagacagtcaactag
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