Oncorhynchus mykiss (rainbow trout): 110528541
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Entry
110528541 CDS
T07259
Name
(RefSeq) alpha-1-syntrophin
KO
K24063
alpha-syntrophin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110528541
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Ortholog
Paralog
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
SOS1_NGEF_PH
PDZ_2
Motif
Other DBs
NCBI-GeneID:
110528541
NCBI-ProteinID:
XP_021466333
Ensembl:
ENSOMYG00000015456
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Position
7:complement(77874612..77948295)
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AA seq
486 aa
AA seq
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MAAAMKAQKTGLLELRVTVDRWIRVLATLTEETLTVSPGEVAEEPVKPNPTPAGDINGDP
ANLSSFPVPETITNVKRTVRVTKQDVGGLGISIKGGKENKMPILISKIFKGLAADQTEAL
YVGDAILSVNGSDLREATHDDAVQALKKTGKEVILEVKYIKEMSAFFKNTLPGAPLPWDS
PHATPQKGADAPPTELKEARTIPLKMCQVTRKQCPPDTENRYFEVISSSRKSSVFLRAKD
PAMAQSWYNAIQAGVSALVPRVRDELRAMQAGLEVKHMGWITEQATQGPERPVLALLTER
DLLLYPTLPDSKDGINSPAKSHPLITTRLVHSGPGKSSPLLDSELSFGLRTGTKQGVETH
LFRVDSAKELSAWTHMLVDGCHNAAELIQEVTTACSWNGKECNLGVHIDEGFSLFTEEMG
IRKTVLLQQPFERLRMSSDDGVHMIFLDFGGPEAEIQLDLHSCPKTMVFIIHSFLSAKVK
RLGLLA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcgatgaaggcacagaaaactggactgttggaacttcgagttaccgtggac
cgttggatccgtgtattagccacacttacggaggagactttaaccgtgagccccggagag
gtcgccgaagaaccagtgaaacccaacccaactcccgccggtgacattaatggagaccca
gccaacctcagctcctttcccgtcccagaaacgatcaccaacgttaagcgcacggtgaga
gttacaaagcaagatgtgggaggacttggaattagtattaaaggtgggaaagagaataaa
atgcctattctcatctcgaagatcttcaaagggttggctgctgaccagacggaggccctg
tacgtgggtgacgccatcctttcggtcaacggctctgacctccgggaggccacacacgat
gatgccgtgcaggctctaaagaagacgggcaaggaggtcatcctagaggtgaaatacatc
aaggagatgtcagccttctttaagaacaccttgcccggtgcacccctaccctgggactcc
ccccatgccacgccacagaagggcgcagacgccccccctaccgagctgaaggaggccagg
accatccccctgaaaatgtgccaggtgaccaggaagcagtgccccccggacacagagaac
aggtactttgaggtgatctcgtccagcagaaagagctcggtgttcctgagggccaaggac
cctgccatggcccagtcctggtataacgccatccaagccggggtttcggccctggtgccc
cgagtcagggatgagctgagggccatgcaggcgggcctggaggtcaaacacatgggatgg
atcactgagcaggcgacccagggtccagagagaccggtgctggctctgctgactgagaga
gacctgctgctgtaccccacccttcctgacagtaaagacggcatcaacagcccagccaag
agccacccgctcatcacaactagactggtccactcaggaccggggaaaagctctcccctg
ctggactcggagctctcctttgggctgcgcaccggcaccaagcagggcgtggagacccac
ttgttccgggtggactcggccaaggagctttcggcctggacccacatgctggtggacggc
tgccacaacgccgccgagctcatccaggaggtcaccacagcctgcagctggaacgggaag
gagtgcaacctgggagtgcacatcgacgagggctttagccttttcactgaggagatgggc
atcagaaaaacggtgctcctccagcaacccttcgagcgtctgcgcatgtcctccgatgac
ggtgtacacatgatcttccttgactttggagggccagaggcggagattcaactggacctc
cactcctgccccaagaccatggtgttcatcatccactccttcctctctgctaaggtcaag
cggctaggcctgttagcatga
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