Oncorhynchus mykiss (rainbow trout): 110528578
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Entry
110528578 CDS
T07259
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110528578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110528578
03036 Chromosome and associated proteins [BR:
omy03036
]
110528578
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110528578
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110528578
PBAF complex
110528578
GBAF(ncBAF) complex
110528578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
110528578
NCBI-ProteinID:
XP_036840094
LinkDB
All DBs
Position
7:81223576..81256912
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AA seq
512 aa
AA seq
DB search
MAARGSFQSAPTGGGGGGGMGPGPQVQGGGPGMGPGTPGGRMGPSSGAQNHLYRSPMPGP
GYPRPGGMPPSSRMTPQGPPMGPPGYGSSPVSRPGMPGVMDPSRKRPAPQQVQQQRNQHT
KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLR
IFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLVIE
LDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRLAR
MLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRLHA
LLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLDNK
IHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVANPEEERRAEFYF
QPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggtagttttcaatcggctccaacgggaggaggtggtggcgggggaatg
ggacctggaccccaggtgcaaggtggaggaccaggcatgggacctggaactcctggtgga
aggatgggaccctcatcgggcgcacagaaccacctttaccgatctccgatgcctgggcct
ggatacccgagaccaggtgggatgccaccctccagccgtatgacaccccagggtccgccc
atggggcctccaggctatggctccagccccgtgtcccgaccagggatgcctggcgtcatg
gatccctcccgtaagaggcctgcccctcagcaggtccagcaacagcgcaaccaacatacc
aagaagaagaaaatggcggataagattttacctcagaggatccgggagctggtgccagag
tctcaggcctacatggacctgctggcgtttgagaggaagctggatcagaccatcatgagg
aaacgtctggacatccaggaggcactcaagagacccattaagcaaaagcgaaagcttcgt
atcttcatatccaacaccttcaaccctgccaagcccgacgcagaagacggagagggcact
gttgcatcatgggagctgcgtgtcgaagggcgtctgcttgaagatactgctgtgtccaag
tatgaagccaccaagcagaagagaaagttctcttccttcttcaaatctctggtcatcgag
ttggacaaggacctctatgggcctgacaatcacttggtcgagtggcacaggactgcgacc
actcaggagacagacgggttccaggtgaagaggccaggggatgtgggcgtacgctgcact
gtcctactcatgctggactaccagccccctcagttcaagctggaccctcgcctggcccgt
atgttggggatccacacccagaccaggccggtcatcattcaggcactctggcaatatgtt
aagacccacaagctgcaggacccccacgagagagagttcatcaactgtgacaagtacctg
cagcagatctttgagactcagcgtatgaagttctctgagatcccacaacgcctacatgct
ctcctgatgcctccagaacctatcatcattaaccatgtcatcagtgtggatcccaatgac
cagaagaagacagcctgctatgacatcgatgtggaggtggacgacactctaaagacccag
atgaactccttcctcctatccaccgccagccagcaggagatagctggcctggacaacaag
atccatgagaccatagagacgatcaaccagctgaagacccagagagagttcatgttgagc
ttcgccagagacccccagggcttcatcaacgactggctgcaatcacagtgcagggatctc
aagactatgacagatgtggttgcgaacccagaagaggagaggagagcagagttctatttc
caaccctgggcccaggaggccgtgtgtcgttacttctactccaaggtccagcagaggagg
caggagctggaacaagccctgggaatcagaaacacttag
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