Oncorhynchus mykiss (rainbow trout): 110528585
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Entry
110528585 CDS
T07259
Name
(RefSeq) integrin alpha-7 isoform X1
KO
K06583
integrin alpha 7
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510
Focal adhesion
omy04512
ECM-receptor interaction
omy04810
Regulation of actin cytoskeleton
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110528585
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110528585
09142 Cell motility
04820 Cytoskeleton in muscle cells
110528585
04810 Regulation of actin cytoskeleton
110528585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110528585
04515 Cell adhesion molecules [BR:
omy04515
]
110528585
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110528585
Cell adhesion molecules [BR:
omy04515
]
Integrins
Integrin alpha subunits
110528585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
DUF7507
Motif
Other DBs
NCBI-GeneID:
110528585
NCBI-ProteinID:
XP_036840080
Ensembl:
ENSOMYG00000030133
LinkDB
All DBs
Position
7:complement(80655573..80723518)
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AA seq
1123 aa
AA seq
DB search
MAPHLRHGFSVSLLQRRCLVLHSLLLSVYFLTVAGFNLDTSMTLTKEGETGSFFGFSLAL
HQQLTPEPHSWILVGAPRARGLGMMQRKRPGALYRCPITGEEFDCERVDIDGDVNLDWES
KDNQWLGVTVKSQGIGGKVVTCAHLYELRQRVGLPSETRDPIGRCYVLSEDLTERDDLDG
GEWKFCEGRPQGHEQFGFCQQGLSAAFTPDNQFIMFGAPGTYNWKGEMRVQLLNQTLLDL
GFYDDGPYEVADEKQLNAQLIPVPYHSYLGFSVDSAKGIMSRGELTFVAGAPRANHTGAV
VLLRKDNVYRLVPQHILWGEELASSFGYSVATADLNSDGWTDLIVGAPNYFDRKAEIGGA
VYIFLNPFGNWEYAQPIRLNGTYDSMFGLTVNNVGDLDRDGYDDIAVGAPFDGDGKVFIY
RGLSSGIDTKPAQILDGVDEGVKRFGYSISGGLDIDGNLYPDLAVGSLGDKLVLYRSRPV
IHVTRDVSIEPQQYIDLEQHNCKGRDGVCVEVKACFTYTAYPETYSPDITLVLLIEADTE
RRKLGLPHRVSFLGRSAQAAEYTHTDEVELRGQRHPACQSATFQLNDNIRDKLRPISLAI
THTIRPPMFSSDTNPEERDTLPPVLSVSTSNTLHSEVNFLREGCGDDKICQSNLKLTYQF
GTRPPTSDLFTPLPRDDEEVAVFSLSDQRSVVLEVTVTNMPSDPLSPEEDGDDAHAAQLL
VTLPDTLSYSGFRGQQVVCQANQNGSQAECELGNPLKRDAILKFYIILSTSAITIETTEL
TVNLLLATISEQRDLATVTAVAKIIIELPLAVSVLARPHQLFFSGAVMGESAMETLDDVG
SAVEFEFTVTNTGPSLQTLGSAFLNIMWPHELSNGKWLLYPTALHFHGHPETPCTPHTSL
NPRKFSHSSPSDDQPQAAGLKARRKGRSNPEEEGHVMTKGSLGRTTPAVAASERRKSLKL
DCLLGSARCVLFQCPLHSFSDSAVLKIQGRLWNSTFLEEFPSVSALELLVRANITVKSSI
KHLVLRDAAAQVPVMIYPEVGLTAQYWVPWWWILIAILAGILVLSLLVCILWKCGFFRRV
QYEDKVPQYHAVKIPRQDRPQFQQKAGILQKKEWATHWSDGSS
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacatctgagacatggattctcggtctctcttttacagcgccggtgtctcgtc
ctccattctctccttctctccgtctatttcctgactgttgcagggttcaacctggatact
agcatgactctgaccaaggagggggagaccggaagcttttttggattctctttagcgctt
caccagcaactcacaccagaaccacacagttggatcctggtgggggcgccgcgggccaga
ggactgggcatgatgcagaggaagcgccctggcgctctgtaccgctgtccaatcacaggc
gaggagtttgactgtgagcgcgtggacatcgatggagacgtaaacctcgactgggaaagc
aaggacaaccagtggctaggagtaacagtcaagagccaggggattgggggaaaggtggtg
acgtgtgcccatctgtacgagctgcgtcagcgcgtgggcctgccgtcggagacgcgggac
cccatcgggcgttgctacgtgctcagtgaggacctgaccgagagggatgacctagacgga
ggggagtggaagttctgtgaggggcgaccccagggacacgaacagtttggcttctgtcag
cagggtctgtctgccgccttcacacccgacaaccagtttatcatgttcggagctcctgga
acgtacaactggaaaggagagatgcgcgtccagctactaaaccagactttactggatctg
ggtttctatgacgacgggccctatgaagtggcggatgagaaacagctgaatgctcagctg
atccctgttccctaccatagttacctgggcttctcagtggactctgctaaaggcataatg
agtcgtggtgagctgaccttcgtggcgggggctccgagagccaatcacacgggagcggtg
gtgctactgcgtaaagataacgtgtaccgcctggtgccacagcacatcctgtggggagag
gagctggcttcttccttcgggtactctgtggccacggctgatctcaacagtgacggctgg
acagacctgatagtgggagctcctaactactttgaccgaaaagcagagatcggaggtgct
gtgtacatcttcctcaacccattcggtaactgggaatatgctcagccaatcaggctcaat
ggaacctatgactccatgtttggattgaccgtcaacaacgttggagacttggacagggac
ggatatgacgacatcgctgtgggggctccgttcgatggggatggcaaagtgttcatctac
cgaggcttgtcctcaggcatcgacaccaagcctgcacagatcctggatggagtggacgag
ggggtgaagaggttcggctactccatctcaggaggtctggacatcgatgggaacctgtac
cctgacctggcagtaggctctctcggtgataagctagttctgtacaggtctcgcccggtc
attcacgtgacccgggatgtatccatcgaacctcagcagtatattgacttggagcaacac
aactgcaaggggagagatggagtttgtgtggaggtcaaagcctgcttcacctatactgct
tacccagagacctactcaccagacatcaccctggtcctactcatcgaggctgacacagag
cgcaggaagctcggcctgccccaccgtgttagcttcctgggtcgcagtgcacaggcggca
gagtacacacacactgacgaggtggagctgagaggtcaacgccatcccgcctgccagagc
gccaccttccaactaaacgacaatatccgtgataagctgcgtcccatctctctggccatc
acccacaccatcagaccccccatgttctcctcagacactaacccagaggaacgagacacg
ctacctcctgtactgagtgtttccacctccaacaccctgcactctgaggtgaatttcctg
agggaaggctgtggcgatgataagatttgtcagagcaacctgaagttgacctaccagttt
ggaacccgacctcccacctctgacctcttcacccctctgccaagggatgatgaagaggtg
gcggtgttttctctgtctgaccagaggtctgtggtgttggaggtgaccgtcaccaacatg
ccctcagaccctctgtccccagaggaggatggagatgatgcccatgctgcccaactactg
gtgaccctgccagacaccctgtcctactctggcttcaggggacaacaggtggtgtgccag
gccaatcagaacgggtctcaggcagagtgcgagctgggaaacccgctgaagagagatgct
atactgaaattctacatcatcctcagcacgtctgctatcaccatagagaccacggaactc
actgtcaacctcctgttggctaccatcagtgaacagcgagacctggccacagtcacagcc
gtggctaaaatcatcatagagctccccctggctgtcagtgtgctggccagaccacaccag
ctgttcttcagtggggctgtaatgggggagagtgccatggagaccttggacgatgtgggg
agtgctgtggagtttgagtttacggtgaccaacaccgggccgtccctgcagactctaggc
tccgccttcctcaacatcatgtggcctcacgagctgtccaatgggaagtggctcctgtac
cccactgctctccacttccatggccatccagaaacaccctgtaccccccacacctccctc
aacccacgcaagttctcccacagttctccttctgacgaccagccacaggcagcaggcctg
aaggccaggaggaaggggcgttccaacccagaagaggagggccatgtgatgaccaagggc
agtctgggaaggactacgcctgctgtggctgcctcagagagacgcaagtcactcaaactg
gactgtctgctgggttcagcgcgctgtgtgctgttccagtgtcctctccacagcttctct
gactctgctgtcctcaagatccagggacgcctttggaacagcacctttctggaggagttc
ccatcagtcagtgctctggagctgctggttagagccaacatcacagtcaagtccagcatc
aaacacctggtgctgagggatgctgctgcacaggtcccagtgatgatttacccagaggtt
ggtctgactgcccagtactgggtcccctggtggtggattctcatagccatcctggctggt
atcctggtgctgtctctgctggtctgcatcctctggaagtgtggtttcttccgtcgggtc
cagtatgaagacaaagttcctcagtaccatgcagtgaagatcccccgtcaagaccggccc
cagttccagcagaaggcagggatcctccagaagaaggagtgggccacacactggagtgac
ggaagctcctga
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integrated database retrieval system