Oncorhynchus mykiss (rainbow trout): 110528606
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Entry
110528606 CDS
T07259
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog isoform X2
KO
K14004
protein transport protein SEC13
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy04141
Protein processing in endoplasmic reticulum
omy04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110528606 (sec13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110528606 (sec13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
110528606 (sec13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110528606 (sec13)
04131 Membrane trafficking [BR:
omy04131
]
110528606 (sec13)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110528606 (sec13)
Membrane trafficking [BR:
omy04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
110528606 (sec13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110528606 (sec13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
110528606 (sec13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
ANAPC4_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
110528606
NCBI-ProteinID:
XP_021466415
Ensembl:
ENSOMYG00000035210
UniProt:
A0A8C7SZ12
LinkDB
All DBs
Position
7:complement(82121338..82132214)
Genome browser
AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWDKMYEYTGHDSSVNSVCWGPYDFGLIL
ACGSSDGAISLVTCSGDQQWDIKKISNAHTIGCNAVSWAPSVVPGSLIDQPSGQKPNFIK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDLSGNTWTAKLLHKFNDVVWHVSWSVTGNILAVSGGDNKVTLWKESADGQWACIS
DVNKGQGAVSSIADGATNEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtttccgtcatcaacacggtggacacctcccacgaggacatgatccatgatgcccag
atggattattatggcaccagactggccacctgctcttctgacaggtctgtcaagatcttc
gatgttaaaaacggaggacaaatcctagtggcagatctgagaggccatgagggtcctgtg
tggcaggtggcctgggctcaccccatgtacggcaacatcctggcctcctgttcctatgac
aggaaggtgatcatatggaaggaagagaacggaacctgggataagatgtacgagtacact
ggacatgactcttcagtgaattcagtgtgctggggtccctatgactttggtctgatcctg
gcctgtggcagctcggatggagccatctcattggtcacctgttctggggatcaacagtgg
gacattaagaagatcagcaatgcacacacaattggctgtaacgcagtgagctgggctcca
tctgtggtgccaggtagtctgatagaccagccctcgggtcagaaacccaacttcatcaag
aggtttgtctcaggaggctgcgacaacctggtcaaactctggaaagaggaggatggccaa
tggaaggaggaccagaagctggaggctcacagtgattgggtcagagatgtaggctgggct
ccctccataggactacccaccagcaccatcgccagctgctctcaggacggcagggtcttc
atctggacgtgtgacgacctttcaggcaacacgtggacggctaaactcctccacaagttc
aacgacgtggtgtggcatgtcagctggtccgtcactggaaacatcctggccgtgtccggg
ggggataacaaggtgacgttgtggaaggagtcggcagacggccagtgggcctgtatcagc
gacgtcaacaaaggccagggagccgtatcgtccatcgcagacggagcgacgaacgagcag
tga
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integrated database retrieval system