Oncorhynchus mykiss (rainbow trout): 110528658
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Entry
110528658 CDS
T07259
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110528658
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110528658
Transporters [BR:
omy02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110528658
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Motif
Pfam:
SNF
MG4
Motif
Other DBs
NCBI-GeneID:
110528658
NCBI-ProteinID:
XP_036840362
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Position
7:86018075..86033561
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AA seq
539 aa
AA seq
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MATNGTKGSDGHVLTEVNAEPNDKPKTLVVKVQKKDLPERENWTGKFDFLLSCVGYAIGL
GNVWRFPYLCGKNGGGAFLIPYFLTLIFAGMPLFLLETSLGQYTSIGGLGVWKLAPMFKG
VGLAAAVLSFWLNIYYIVIIAWAIYYLWSSFTTELPWQSCGNSWNTERCYTNYSILNAAN
LTSAVQEFWERNMHQLTDGLEKPGEIRAPLAITLAIAWVLVYFCIWKGVAWTGKVVYFSA
TYPYFMLFILFCRGITLPGAIDGILFYITPNFEKLKESEVWLDAATQIFFSYGLGLGSLI
ALGSYNPFNNNVYRDSVIVCCINSFTSMFAGLVIFSIVGFMANVTKRPIIEVAASGPGLA
FLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPRALRGRRELFI
AAVCLVSYIIGLSNITQVQYTHTQDDIQNNTTNNRKHGLTPLGLTDTLSVGKTGRKDVRL
RPNNNRSYRRRCRHENTSLSGCHLDIASARKPQFQPEKDVPLMSHARYCQLRLDFGCIV
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaatggtactaaaggctctgatggacacgttctaacggaggtgaatgccgag
cctaacgacaaacccaaaaccttggtcgtcaaagtccagaaaaaggaccttcccgaaaga
gagaactggactggaaaatttgactttctcctgtcttgcgtcgggtacgcaattggactg
ggaaatgtctggagattcccttatctatgtgggaagaatggaggaggggccttcttgatt
ccctactttttgacgctcatatttgctggtatgcccctgtttctgcttgaaacgtccctc
ggtcagtacacatcgattggagggcttggggtgtggaaactggctcccatgtttaaaggt
gttggtctggccgctgcagtgctgtctttctggctaaatatttattacatcgtcatcatt
gcctgggccatatactatttgtggtcctcctttactaccgagttgccatggcaatcatgt
ggaaattcttggaacacagagcgatgttacaccaactacagcatcctgaacgctgccaac
ctcaccagtgctgttcaggaattctgggagcgtaacatgcaccagttaacagacggtctg
gagaagcctggggagatcagagcgcctctagccatcacgctggccatcgcctgggtcctt
gtctatttctgtatctggaaaggtgtcgcctggactgggaaggtggtgtacttctcagcg
acgtacccctactttatgctcttcatcctcttctgccgcggcatcactctgcccggagcc
atcgatggaatcctcttctatatcacgcccaacttcgagaagctcaaggaatcagaggtg
tggttggatgctgccactcagatatttttctcctatgggctggggctgggatcactgatt
gctctgggaagctacaacccattcaataataatgtttacagagattctgtcattgtgtgc
tgcatcaactcgttcaccagcatgttcgctggcttagtcatcttctccattgtgggcttc
atggccaacgtgactaagaggcctataatagaagtagcagcctcaggtcctggcttggcg
ttcttggcctaccctgaggcagtaacccagctgccgatctctcctctctgggcgatcctc
ttcttctccatgttgctgatgcttggaatcgacagtcagttctgtacggtggaggggttc
atcactgcgttggtggatgaattccccagagctctgagaggaagaagagaactcttcatc
gctgccgtctgcctggtctcttatatcatcggcctgtccaacatcacacaggtacagtac
acacacacacaggatgatatacaaaacaacactacaaacaatagaaaacatggtctgaca
ccactgggtttgactgacaccctctcagtgggcaaaactggtcgaaaagacgtcaggctt
cgaccaaataacaaccgaagctatcgtcgtcgatgtcgtcatgaaaatacgtctttatct
ggttgtcatctcgacattgcttcagccagaaaaccccaatttcaaccagaaaaggacgtc
cctctaatgtcccatgccagatattgccagctgagactagactttgggtgtattgtatga
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