Oncorhynchus mykiss (rainbow trout): 110528679
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Entry
110528679 CDS
T07259
Name
(RefSeq) filamin-B isoform X1
KO
K27392
filamin-B
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110528679
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110528679
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
110528679
Intermediate filaments
Intermediate filament-binding proteins
110528679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Y_Y_Y
Big_3_5
Invasin_D3
CFSR
DUF4930
Motif
Other DBs
NCBI-GeneID:
110528679
NCBI-ProteinID:
XP_036840200
LinkDB
All DBs
Position
7:complement(87684561..87797999)
Genome browser
AA seq
2604 aa
AA seq
DB search
MPVTEKDLADDAPWKKIQQNTFTRWCNEHLKCVNKRIADLQLDLSDGLRLIALLEVLSQK
KMYRKYHARPTFRQMKLENVSVALEFLDRENIRLVSIDSKAIVDGNMKLILGMVWTLILH
YSISMPVWEDEVDDEAEKKTPKQRLLGWIQNKVPDLPINNFSRDWQSGKALGALVDSCAP
GLCPDWETWDNKPSDNAQEAMQLADDWLGIPQVIAPEEIIDPSVDEQSVMTYLSQFPKAK
LKPGAPLKPKLNPKKARAYGPGLEPVGNRVLRPAVFTVDAFSAGQGQVTVYVEDPEGTRE
EVKAVPNEGKKTFSVTYIPQVMGHHKVTVLFAGQQIPKSPFEVSVDKAQGDPTKVTAKGP
GLDAIGNIANKPTYFDIYTAGAGVGDVSAFIKDPQGRPLEAMVEDKGDSVFRCTYKPTQQ
GPHTITVTFGGIAIPKSPSTVNIGPASMPGACRATGRGLQPRGVRVKQVADFRVDTRNAG
SGDLKVSVKGPKGMEEPVKQKESGDGVFNYDYYPHAPGKYTVTITWGGQHIPKSPFEVGV
GPEAGPQKIRAWGPGLEGGMVGKSADFVAESIGTDVGVLGFAIEGPSQAKIECEDQNDGS
CDVKYWPSEAGEYAVHVMCDDDDIEDSPFMAYIVPDNQDINPSLVKAYGPGLEKSGCVIN
KPAEFTVNTKDAGTGPLKISAQSAEGGPLDVKVKKTGDGVYACSYTPVAAVKHTVAITWA
GVSVPNSPFRVTVGKGSHPHKVKVFGPGIERTGLKANEPTHFTVDCTEAGEGDVSVGIKC
DANIISDKEEDVDFDIIPNANDTITVKYMPPGAGRLTIKVLFTNQEIPISPFRVKVEPSH
DATKVKAEGPGVARSGVECGKPTHFTVHTKGAGKAPVNVQFTGTGKGDAVQDFDIIDNYD
YSHTVKYTPIQQGEMVIIITFGGDVIPKSPFAVGVAAPLDVTKVQVNNLDGRVEVGQDQE
FVVGTKGAGGQGKLEVKISSPSGKLVPCVLEAQSGKRPENSTVKYIPKEEGLYAVEVNYD
GHPIPGSPFPVEATLPPDPSKVKAFGPGLKGGLVGNPAEFTIDTKGAGTGGLGLTVEGPT
EAKIECSDNGDGTCSVSYLPTEPGEYLVNILFEETHIPGSPFHSDVNCPFDPTKVVASGS
GLKRAKVGEVSVVNVDCSRAGPGQLTLDAASDSGNNKAKTEVIDNKDGTYTVTYVPLTAG
MYTLLLKYGGKATPGFPAKVMVDPAVDTSRIQVFGPGVEGQALFREATTEFTVDARSLTK
KGGDHIKAQVRNPSGAMTDCMVTDKADGTYGIEYTPFENGVHAVEVLYDESPVPKSPFQV
GVEEGCDPTRVLAKGPGLQEAITEAPNNFSIITRGAGIGGLGITVEGPSESKMSCKDNKD
GSCNVEYIPFVPGLYDVNITYGGKHIPGSPFKVPVKDMVDPSKVKISGPGVSSGVRANIP
QSFTVDCSKAGVAPLSVAVTAPKGVAEPVEVTNNGDGTHTVAYTPSVEGPYSVVVKYADE
EITRSPFKLRVLPTHDASKVVASGPGLTTGVPASFPVEFTIDAKDAGEGQLSVQITDQDG
KPKRVGIQDNRDGTYLVSYVPDKVGRYTIVIKYGGDEIPASPYRVRATSSGDASKCTVTG
PGIAPIIAVGEEVGFVVNAKAAGKGKVTCIVVTPDGTEVEADVIQNEDGTFDIFYTAPTP
GNYVIYVRFGGENVPKSPFKVMATDEDPMMQQQSANQQSAAPGAAGFQPWVTDGSYNPAN
RMNGTGFRPFDMVIPFAFRKGEITGEVHMPSGKTAQPEIMDNKDGTVTVKFAPTEAGLHE
MHIKYNGTHIPESPLQFYVNNANSANVTASGPGLVYGVANKTAMFTIYTEGAAEGGLDLA
IEGPSKADITCVDNKDGTCTVTYLPVLPGDYHILVRYNDKHIAGSPFNARITEEKRCSQL
KLGSAADFSLDITETDLSLLTASIKAPSGRDEPCLLKRQPNNHIGISFIPREVGEHVVSI
KKNGCHVPNSPITIMVVQSEIGDASKVKVYGQGLVEGHTFDMSDFVVDTREAGYGGLALS
VEGPSKVDIQTQDVEDGTCVVSYCPSEPGSYIVSVRFADQHVPGSPFTVKVTGEGRIRES
VTRRQKAASIATVGSVCDLNLKIPEIDIHDVSAQVTSPSGATEKADMEAVGPSTYCVRFV
PHEMGIHTVDVKYRDQHIPGSPFQFTVGPLGEGGAGKVRAGGPGLEKAECGVPAEFSIWT
REAGAGGLSVAVEGPSRAEISFEDRKDGSCEVSYVAQEPGDYEVSVKFNEEHIPDSPYLV
PVVAPTDDARRLTVASLQESGLKVNHPASFAVHLNGAKGTIDAKAHSPSGALEECAVSQL
EQDKYAIRFIPRENGLHSIDVKFNGSHIPGSPFQVRVGEPGQSGDAGLVTAHGAGLERGT
TGQQSEFIINNTKAGPGALAVTIEGPSKVKMDCQECSEGYKVQYTPMAPGNYLVSIKYGG
PNHITGSPFKAKVTGQRLVNVSNASETSSLMVESVTKSSSTNSHSALPRSASDASKVATR
GPGLSKAYMGQRASFSVDCSKAGKNMLLVGVHGPHIPCEEVSVKHMGNMQYNVSYILKEK
GDYILVVKWGEDHVPGSPFHVTVP
NT seq
7815 nt
NT seq
+upstream
nt +downstream
nt
atgccggttacagagaaagacttggcagacgacgcgccatggaagaaaatccaacaaaac
acttttactcgctggtgcaacgagcacttaaagtgtgtgaacaagaggatagccgactta
cagttggacctgagcgacgggctgcggctcatcgccctgctggaggtactgagccagaag
aagatgtaccgaaagtatcatgctagacctactttccgccagatgaaactcgagaacgtg
tccgtggcgctggagttcttggaccgggagaatatccgactcgtttccatagactcgaag
gccatagtggacggcaacatgaaactgatcctgggcatggtgtggaccctgatcctccac
tactccatctccatgccggtgtgggaagacgaggtggatgacgaggcggagaagaagact
ccaaagcagaggcttctgggatggatccagaataaagtgccagacttgcccatcaacaac
ttcagcagagactggcagagtggcaaggccctgggagccctggtcgacagctgtgctcca
ggtctgtgtcctgactgggagacgtgggacaacaagccctcggacaacgcccaagaggcc
atgcagctggctgacgactggctgggcatccctcaggtgattgcaccagaggagatcatc
gaccccagtgtggatgaacagtccgtgatgacgtacctgtcccaattcccaaaagccaaa
ctgaagcctggtgctcccctcaaacccaaactcaaccccaagaaggcccgtgcatatgga
ccaggtctggagccagtaggtaacagggtgttgcgtcctgctgtcttcacggtggatgct
ttcagtgcaggtcagggacaggtcactgtttacgtggaggatccagaaggaaccagagaa
gaggtgaaggcggttcctaacgaagggaagaaaaccttcagtgtcacctacataccccag
gttatgggtcatcacaaggtgactgtgctgtttgcaggccagcagatccccaagtctccg
tttgaggtgagcgtggacaaggctcagggagaccccaccaaggttacagccaaaggtcct
ggactggacgctataggaaatatagccaacaaacctacatacttcgacatatacactgca
ggggcaggagtgggagatgtgtcggctttcatcaaggatccccagggcagaccgttggag
gccatggtggaggataagggagacagtgtgttcaggtgtacctacaagcccacccagcaa
ggtcctcacacaatcaccgtcaccttcggaggcatcgccatacccaagagtccttctact
gtcaacattggaccagcgtcaatgccaggggcgtgtcgtgccacagggcgtggcctccag
cccagaggtgtcagagtgaaacaggtggctgacttcagagtggacaccaggaacgcaggg
agtggggatctcaaggtctcagtcaaaggccccaaaggtatggaggagccagtgaaacag
aaggagtctggtgatggggtgtttaactatgactattaccctcacgcccctgggaagtac
actgtcaccatcacctggggaggacagcacatccctaagagtccgtttgaggtgggggtt
ggtccggaggcgggccctcagaagatcagggcctgggggccaggtctggagggaggcatg
gtgggtaaatcggctgactttgtggcggaatccatcggcactgatgtgggagttctgggc
tttgccatcgagggcccgtcccaggctaaaatagagtgtgaggaccagaacgatggttca
tgtgatgtgaagtactggccatcggaggcaggggagtacgctgtccacgtgatgtgtgac
gacgacgatatagaggatagtcccttcatggcttacatcgtccctgacaaccaggacatc
aaccccagcttggtgaaggcctacggtccaggcctggagaagagtggctgtgtcatcaac
aaaccggcagaattcacagtcaacactaaggatgctgggacaggccccctgaagatctct
gcccagagtgccgagggtggtcccctcgacgttaaggtgaagaagactggagacggtgtc
tacgcctgttcctacacgcccgttgctgcggtcaaacacacagtcgccatcacctgggca
ggagtcagtgtacccaacagtcccttcagggtgactgttgggaagggcagccatcctcac
aaggtgaaggttttcggtccaggaatagagaggactggactgaaggccaatgaacccaca
cacttcactgtggactgcacagaggctggggaaggggatgtgagtgttggtatcaagtgt
gatgccaatataatcagtgataaagaggaggacgtggacttcgatatcatcccaaatgcc
aacgacactatcactgtgaagtacatgcctccaggagctggacggctcaccatcaaggtc
ctcttcactaaccaggagattcccatcagcccgttcagggtcaaagtggaaccttcccat
gacgccaccaaggtcaaggccgagggtcctggagtggctcgttcaggagtggagtgtggc
aaaccgacccatttcacggtgcacactaaaggagcaggcaaggctcccgtgaacgtccag
ttcactggtaccggcaagggagacgccgtccaagactttgacatcatcgacaactacgac
tactctcataccgtcaagtatactccaatacaacagggagagatggtaatcatcataacg
ttcggaggagatgtcatccccaagagtccctttgctgtgggagtggctgctcctctggat
gtcaccaaggtccaggtcaacaacctggatggcagagtggaggtggggcaggaccaggag
tttgtggtgggcaccaagggagcgggaggccagggtaaactggaggtgaagatcagcagc
cctagcggtaagcttgtcccctgtgtgttggaggctcagtctgggaagaggcccgagaac
agcacggtgaagtacatccccaaggaggagggtctctatgctgtggaggtgaactacgat
ggacacccaatcccaggcagccccttccctgtggaggccacactgcctcctgaccccagc
aaggtgaaggcgtttggtccaggtctgaagggaggtttggtgggtaatcccgctgagttc
accatcgacactaagggtgcagggaccggtggcctgggcctgactgtggaggggcccacc
gaagccaagatcgagtgctctgacaacggggacgggacatgtagcgtgtcctaccttccc
acggagccaggagagtacctggttaacatcctgtttgaggagacccatatcccaggatcc
cccttccactctgacgtcaactgcccctttgaccccaccaaggtggtggcatctggctcg
gggctgaagagggccaaggtgggagaggtcagtgtggtgaatgtggattgttccagggct
ggaccgggtcaactcaccctggacgctgcctctgactctggcaacaataaggcgaagact
gaggtgatcgacaacaaagatggcacctacacagtgacctacgtgcccctgaccgctggg
atgtacaccctgctactgaagtacggaggcaaggcgacgcccgggttccctgccaaggtg
atggtcgaccctgcagtggacacatccagaatccaggtgtttggccccggagtggaggga
caagcattgttccgggaagctactacggagttcacagtagatgccaggtctctgactaag
aagggaggtgaccacatcaaagcccaggtcagaaatccctctggtgccatgactgactgt
atggtcactgacaaggcggacgggacctatggcattgagtacacgccctttgaaaacgga
gtccatgctgtggaggtgctgtacgatgagtctccggtcccgaagagtcccttccaggtg
ggggtagaggagggctgtgatcctaccagggttctggctaagggccccgggctccaggag
gccatcacagaggcccccaacaacttctccatcatcaccagaggggcaggtatcggaggc
ctgggcatcacagtcgagggcccatcggagtctaagatgtcctgtaaagacaataaggac
ggcagctgtaacgtagagtacatcccattcgtcccaggcctgtatgacgttaacatcacg
tatggaggaaaacacatcccaggcagtccattcaaggtaccagtgaaggacatggttgat
cccagcaaggtgaagatctcaggacccggcgtgagctcaggggtccgcgccaatatccca
caatcctttactgtggactgcagcaaggccggggtggctccgctgtctgtagccgtcact
gcaccgaaaggtgtggctgagccggtggaggtgacgaacaacggagatggaacacacact
gtagcctacaccccttcagtggagggaccctactctgtagtggtcaagtacgctgacgag
gagatcacacgcagtcccttcaagctgcgagtgctgcctacccatgatgccagtaaggtg
gtggctagtggtccaggtctaaccaccggagtgccagccagctttccagtggagttcacc
atcgatgccaaggacgcaggagagggacaactatccgtccagatcacagaccaagatggg
aagccgaagagggttggtatccaggacaaccgtgacgggacctatctggtgtcgtacgta
cccgacaaggtggggcggtacaccatcgtgattaagtacggaggagatgagatccctgcc
tcgccttaccgggtcagagccacgtcctcgggagacgccagcaaatgcaccgtcacaggt
cctggcatcgcccccatcatcgcggtcggggaagaagtgggctttgtggtgaacgctaag
gcagctgggaaggggaaggtgacatgtatcgtggtgacgccggatgggaccgaggtggag
gctgacgtcatccagaacgaggacggaacattcgatattttctacaccgccccgaccccc
gggaactatgtcatatacgtacgatttggaggggagaacgtccccaagagccccttcaaa
gtcatggcgactgatgaggatccaatgatgcagcaacagtcagccaatcagcagtcagct
gctcctggagccgccggattccagccctgggtcacagatgggtcctataacccagccaac
cgtatgaacggaacaggtttccggcccttcgacatggtcattcctttcgccttccgcaag
ggagagatcacaggtgaggtccacatgccgtcggggaagactgctcagccggagatcatg
gacaacaaggacgggacagtcacagtgaagtttgcccccactgaggccggtctacacgag
atgcacatcaagtacaacggaacgcacattccagagtctcctctgcagttctatgtgaac
aacgccaacagtgccaatgtgactgcctccggtcccggtctggtctacggcgtcgccaac
aagacagccatgttcaccatctacacagagggcgctgccgagggaggtttggacttggcc
atcgagggtccttccaaggcagatatcacctgtgtggataataaagatggtacgtgcaca
gtgacctacctacctgttctccctggagactaccatatcctggtcagatacaacgacaag
cacatcgctggcagccccttcaacgctaggatcactgaggagaaacgttgttcccagttg
aagttgggttctgcagctgacttctccctggacattacagaaacggacctgtctctactt
accgccagcatcaaagccccctctggccgcgacgaaccctgtctgctcaagagacagccc
aacaaccacatcggtatttccttcatcccgagggaggttggggagcacgtggtgagcatc
aagaagaatggctgccatgttcccaacagccccatcacaatcatggttgtgcaatctgag
atcggcgacgcctccaaggtcaaggtgtacgggcaggggctggtcgagggacacaccttc
gacatgtctgactttgtggtcgacacacgagaagcaggttacggtggtctggccctatct
gttgaggggcccagtaaggtggacatccagacccaggacgtggaggatgggacatgtgtc
gtctcctactgcccgtcagaaccaggctcctacatcgtctccgtacgcttcgctgaccaa
cacgtgccaggcagcccgttcacggtgaaggtgacaggtgagggccgtatcagagagagc
gtcaccaggagacagaaggctgcttccatcgccactgtcggtagtgtctgtgacctcaac
ctcaagataccagagatcgacatccatgacgtgtcagcccaggtaaccagtccctctggc
gccacagagaaggcagacatggaggcggtggggcccagcacctactgcgtacgcttcgtt
ccccatgagatgggaattcacacggtggatgtgaaatacagggaccagcacattccaggg
agccccttccagttcactgtggggcccctgggagagggaggggctgggaaggtcagggcc
ggtggaccaggcctggagaaggccgagtgtggagtaccagctgagttcagtatctggaca
cgggaggctggtgccggtggtctgtccgtcgctgtagaggggcccagcagagctgagatc
tcctttgaagacaggaaggatggatcctgtgaggtgtcctacgtagctcaggagcctggt
gactacgaggtgtcagtgaagttcaacgaggagcacatcccagacagcccgtaccttgtg
cctgtcgtggcgcctacggacgacgcccgccgtctcactgttgctagtcttcaggagtct
ggcctcaaggtaaaccacccagcatcctttgcggtacatctgaacggtgccaagggaacc
atcgacgccaaggcccactcaccctccggagctctggaggaatgtgctgtgtctcagcta
gagcaagataagtatgctatcaggttcattccgcgtgagaacgggctccactccatcgac
gtgaagttcaatggcagccacatccccgggagccccttccaggtgcgggtgggggagcca
ggtcagagtggagacgcagggctggtcactgcacacggagctggactggagagagggacc
acaggccagcagtcagagttcatcatcaacaacaccaaggcgggccccggggccctggcg
gtgacgattgagggcccctccaaggtcaagatggactgccaggagtgttcagagggatac
aaggtccagtacactcccatggcccctgggaactacctggtttccatcaaatacggagga
cccaaccacatcactggcagccccttcaaggccaaagtcacaggtcagcgcctggtgaat
gtgagcaacgccagtgagacgtcctccctgatggtggagtcagtaaccaaatcatccagt
accaactcccacagcgccctgcctcgttctgcctctgacgccagtaaggtggccacccgt
ggcccaggcctcagcaaggcctacatgggtcagagagccagcttctccgtcgactgcagc
aaggctggtaagaacatgttgctggttggagtccacggcccccacatcccctgtgaggag
gtatcggtgaaacacatgggtaacatgcagtacaacgtctcctatatcctcaaggagaag
ggcgactacatcctggttgtcaagtggggcgaagatcacgtccccggctcccccttccat
gtcactgtcccctag
DBGET
integrated database retrieval system