Oncorhynchus mykiss (rainbow trout): 110528708
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Entry
110528708 CDS
T07259
Symbol
pparg
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03320
PPAR signaling pathway
omy04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110528708 (pparg)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
110528708 (pparg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110528708 (pparg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omy03310
]
110528708 (pparg)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110528708 (pparg)
Nuclear receptors [BR:
omy03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
110528708 (pparg)
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Paralog
GFIT
Motif
Pfam:
zf-C4
PPARgamma_N
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
110528708
NCBI-ProteinID:
XP_036840260
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Position
7:90290101..90409035
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AA seq
620 aa
AA seq
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MHMMCSNFNKQRPRCGTDMVDTQLLAWPMGISLTPVHLEELDDSSHSLDMKPFTTLDYTS
LDYEHGPTISSYRPTQVHHYQASHSPRPTQAHHYQDNHSPRPTQAHHYQASNSPRPTQAH
HYQASYSPSHLSPRPGQGYQPCPSPGSSPALGHHLAYMDHMYNHSQVQEGHGETCCIKLE
PESPPQHSDSSPLYSKLQDDTTASLLNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRL
KLVYDHCDLHCRIHKKSRNKCQYCRFQKCLVVGMSHNAIRFGRMPQAEKEKLLAEFSTDM
DIMHPEAADLRSLAKLLLESYLKYFPLTKAKARAILSGKTGDNAPFVIHDMKSLQEGERF
INCRQMPIHVVQETRTEAGTEAGTGAGCGLGGCLAVSDGLAVGGGLGGGVGLVQEPTDEV
QLRFFYSCQSRSAEAVREVTEFAKSIPGFVGLDLNDQVTLLKYGVIEVLIIMWAPLMNKD
GTLISYGQIFMTREFLKSLRKPFCDMMEPKFEFSVKFNTLELYDSDMALFLAVIILSGDR
PGLLNVKPIEELQETVLHSLELQLKLNHPDSLQLFAKVLQKMTDLRQIVTDHVHLIQLLK
KTEVDMCLHPLLQEIMRDLY
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcatatgatgtgtagcaattttaacaagcaacgtcctcgctgtggtacagacatggtg
gatacccagctcctcgcatggccaatgggcatcagtctgacccctgtacacctggaggag
cttgatgacagttctcactctctggatatgaaaccattcaccaccctggactacactagc
ctggactacgaacacggacccaccatctccagctacagacccacccaggtccaccactac
caagcaagccacagtcccagacccacccaggcccaccactaccaagacaaccacagcccc
agacccacccaggcccaccactaccaagccagcaacagtcccagacccacccaggcccac
cactaccaagccagctacagccccagtcacctcagccctagacctggccagggttaccag
ccctgccccagccctggctccagccctgccctgggacaccaccttgcatacatggaccac
atgtacaaccacagccaggttcaggagggacacggtgagacctgttgtataaaactggag
ccagagtctcctccccagcactcagacagcagtcctctctactccaagctacaggacgac
accaccgcttccctactcaacatagagtgtcgagtctgtggagacaaagcttctggcttc
cactacggagtccatgcctgtgaaggctgcaaggggttcttccgtcggaccatccggttg
aagctggtttatgaccactgtgacctgcactgtcgcatccacaagaagagccgcaacaag
tgtcagtactgtcgctttcagaagtgcctggtggtgggcatgtctcacaatgccattcgt
tttggacggatgccccaggctgagaaggagaagctcctagctgagttctctactgacatg
gacatcatgcaccctgaggctgccgacctgaggagcctggccaagctgctgctggagtcc
tatctcaaatacttccccctcactaaggccaaggccagggccatcctgtctggaaagact
ggggataacgcgccgtttgtaatccatgacatgaagtctcttcaggaaggagagaggttt
atcaactgcaggcagatgcccatccatgttgtccaggagaccaggactgaggcggggact
gaggctgggactggagctggctgtggtctaggtggatgtctggcagtgagtgatggtctg
gctgtaggtggaggtctaggtggaggtgttggtctggtccaagagcccactgacgaggtg
cagctcaggttcttctacagctgtcagtcgcgctccgccgaggccgtccgagaggtcaca
gagttcgctaagagcatccctggcttcgtgggattggacctgaacgatcaggtgactctg
ctgaagtacggcgtcatcgaggtgctcatcatcatgtgggctccactcatgaacaaagat
ggtacactgatctcctatggacagatcttcatgacgagagagttcctaaagagcctgagg
aaacccttctgtgatatgatggaacccaagtttgagttctctgttaagttcaacaccctg
gagctgtatgacagtgatatggcactcttcctcgcggtcatcatcctcagtggagatcgt
ccaggcctgctgaatgtgaagcccattgaggagctacaggaaacagtcctccactctctg
gagctccaactgaaactcaaccacccagactccctgcagctcttcgccaaggttctgcag
aagatgacagacctgaggcagatagtaacagaccatgtgcacctaatccagctactgaag
aagactgaagtggacatgtgtctccacccactgctgcaggagatcatgagagacctctac
tag
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