Oncorhynchus mykiss (rainbow trout): 110528797
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Entry
110528797 CDS
T07259
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110528797
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
110528797
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
23S_rRNA_IVP
Motif
Other DBs
NCBI-GeneID:
110528797
NCBI-ProteinID:
XP_036838714
UniProt:
A0A8C7SCR3
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Position
7:17002517..17015547
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AA seq
907 aa
AA seq
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MGLKDHPEEDGAGRILDLGLVLEYLHIEGSVSRQAGADTGPSMEPGEEEEEACEGSGSCS
LSTPGGKEGEVVGEESAGFDSDPEPARKSTGSNLAGGVFVSELDGVPVPNTHQPLCRTPC
VDLGSEGPPDPPSGEPSSGEALREYQSKLEFALKLGYAEELVRLVLAKLGPYTLINDILG
ELVKLGRKVETNQQLTGSTASQPTPSTCSSSSTCGYVEAQQGRTDSPYQTDLLLGDKDNL
RPVVLDGSNVAMSHGNKEVFSCYGIQLAVDWFLERGHRDITVFVPSWKKEQSRPDALITD
QDILRRLEKDKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLASEKPE
WKKLIDERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPIMPEHKKQPCPYGKKCTYG
HKCKYYHPERSAQCQRSVADELRASAKTSATSTSAKGQAGEAGLVKSHSVPNNVAMGTKR
GSAPKRQCDPSIRALSYGEAEDKLRHAEKCNSLSSSSGSSCCSGSVTLSPAPGGPPSSAL
SDPQEQPPSLGRDTPYMTLPHPHPDPYSSSCDPPDLSYYSVTPAHSGLPARRSPESRFPL
DTDLRLLGSSDCVSSGCDSYGEKASCLCCPGPLLDKYIHHQHHQHNRLYSQHSAPLLEPH
HPSPHTSVLYGYHQSLARGHSFPHDEPPDPHLKRPLYPLPPPLQHQAVGARSSCPGDYPS
VSQSGPYPAGSPLGRCLANTRLETLSDSRLYKRSALPPRKAFSWDPYCSQPPQSCYETYQ
SLPENHDVGWGHTSPWGQTTHSYHPSHQPYSSQPPHPPYPSHPPYPPQPPHPSHAPQPSH
PSMPLHHMHQEPPALSRYGEVRGKVYLNLCNIFPSELVSRVMGRNPHVTDAQQLAAAILA
EKSQSDY
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatccggaggaggatggagcaggccgcatccttgacctggggctg
gttttagagtacctccacatcgaaggctccgtcagcaggcaggctggcgccgatacaggg
cccagtatggagccgggcgaggaggaggaagaggcctgcgagggcagtggcagttgcagc
ttgtccacgcctggggggaaggagggggaggtggtgggggaggagagcgctgggtttgac
agtgacccggagccagcccgaaagagcaccggttctaacctggctggaggagtgttcgta
tctgagctagatggtgtgcctgttcccaacacccaccaacctctatgcaggactccctgt
gtggacctggggtccgaggggcctcctgaccctccgtcaggggagccttcatccggggaa
gccctgagggagtaccagtccaagctggagtttgctctgaagctgggctacgcagaggag
ctggtgcggctggtgctggccaagctggggccgtacacgctcatcaacgacatactggga
gagctggtcaaactgggccgtaaggtcgagacaaaccaacagctgactgggtccacggct
tcacagcccacaccctccacctgctcctcctcttctacctgtgggtatgtggaggcgcag
caggggaggacagactccccctatcagacagacctcctccttggggacaaggacaacctg
cggcccgtcgtcctggacggtagcaacgtggcaatgagccatggcaataaggaggtgttc
tcctgctacggcatccagctggctgttgattggttcctggagcgaggtcaccgtgacatc
actgtgtttgtgccttcctggaagaaagagcagtcccgccctgatgccctcatcacagac
caggatattttacgtcgtctggagaaggacaagatcttggtgttcactccgtctcgtcgg
gtccagggtcgccgggtggtctgctatgacgaccgtttcattgtcaagctggcctacgag
tccgacggcatcatcgtctccaatgacaactaccgcgacctggccagtgagaagccagag
tggaagaagttaattgacgagcggctgctcatgtactcgtttgtcaacgacaagttcatg
cctcctgatgaccctctaggtcgtcatggtcccagtctggagaacttcctgaggaaacgt
cccatcatgccagagcacaagaagcagccctgtccttacggcaagaagtgcacttacggc
cacaagtgtaagtactaccacccggagaggagtgcccagtgccagcgctcggtggcagac
gagctgcgtgccagcgccaagacctctgccacctctactagcgccaagggccaggctggc
gaggccgggctggtgaagagccacagcgtgcccaacaatgtagcgatgggcaccaagaga
ggttctgcccccaaaaggcagtgtgaccccagcatccgggcgctgtcctacggcgaggca
gaggacaagctgagacacgctgagaaatgcaacagcctcagtagtagtagtgggagtagt
tgttgtagtgggagtgttactctgtcccctgcccctggaggacccccctcctctgccctc
agcgacccccaggaacagccaccgagcctgggcagggacacaccctacatgaccctgccg
cacccccaccctgacccctactcctccagctgtgaccctccagatctgagctactactca
gtgacgccggcccactctggcctgccagcacggaggagtccggagtcccgcttcccactg
gacaccgatctgcgtctgttgggctcgtcagactgtgtcagcagcggatgtgactcgtac
ggagagaaagcctcctgtctgtgctgcccaggccctctgctggacaaatacatccaccat
cagcaccatcaacacaaccgcctgtactctcaacactctgcccccctgctcgagccacac
cacccctccccccacacctctgtcctctatggctatcaccagagcttggcacggggccac
agcttcccccatgacgagccccctgacccccacctgaagcgccctctgtaccccctcccc
cctcccctccagcaccaggccgtaggcgcccgctccagctgccctggagactacccctct
gtgtcccagtctggcccttaccctgctggctcccctctgggccgctgcctggccaacacg
cggctggagacgctgtcagactcccggctgtacaaacgctccgcgctgccccccaggaaa
gccttctcctgggatccctactgcagccaaccccctcagtcctgctatgagacctaccag
agtctaccagagaaccacgatgtaggctggggacacacatctccatggggacagaccaca
cactcttaccacccctctcaccaaccctactcctctcagccccctcacccaccctacccc
tctcacccaccctacccccctcagccccctcacccatcccatgcacctcagccatcccac
ccgtccatgcccctccaccacatgcaccaggagccccccgccttgagccggtacggggag
gtgcggggtaaggtctacctcaacctgtgtaacatcttcccctctgagctggtgagccgg
gttatggggaggaacccccatgtgacggacgcccagcagctagctgccgccatcttggct
gagaagtcccagtctgactactga
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