Oncorhynchus mykiss (rainbow trout): 110528812
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Entry
110528812 CDS
T07259
Name
(RefSeq) integrin beta-6 isoform X1
KO
K06589
integrin beta 6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510
Focal adhesion
omy04512
ECM-receptor interaction
omy04518
Integrin signaling
omy04810
Regulation of actin cytoskeleton
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110528812
04518 Integrin signaling
110528812
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110528812
09142 Cell motility
04820 Cytoskeleton in muscle cells
110528812
04810 Regulation of actin cytoskeleton
110528812
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110528812
04515 Cell adhesion molecules [BR:
omy04515
]
110528812
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
110528812
Cell adhesion molecules [BR:
omy04515
]
Integrins
Integrin beta subunits
110528812
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
I-EGF_1
PSI_integrin
EGF_integrin
EGF_2
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
110528812
NCBI-ProteinID:
XP_036838803
Ensembl:
ENSOMYG00000015516
LinkDB
All DBs
Position
7:complement(21111060..21128520)
Genome browser
AA seq
786 aa
AA seq
DB search
MGIAVLLLLILRHWINNVEGTCSVGSAVTCDECLQLGPHCAWCTQENFTDSFLISERCDT
PYLLLGRGCPQDQVEFPVTNSEVLRDQPLGKKTGNTNSTQISPQKMALKLRTGSEVTFQI
SVQQTEDYPVDIYYLMDLSASMIDDLEMIKDLGSTLSKEMAKLTSKFRLGFGSFVEKPVL
PFIKITPGELENPCRSVDESCLPTFGYKHILPLTSSTEKFNNIITNQRVSANIDLPECGF
DAIMQAAVCGDKIGWRNDSMRLLVFVSDADSHFGMDSKMSGIVVPNDGECHLDSNNEYSM
AAHLEYPTLGQLMDKLVDNNILLIFAVTENQKHNYENYASFIPGATVGVLESDSRNILEL
IVTAYKELRSEIELEVLGDTEDLQISFTAICQDGTVLPGQKRCSNVKAGDTVSFNVTVEL
SECLDGPQRFLIKPVGFQDPLEIDLESLCSCACQQTPEPNSSHCSLGRGSLECGSCLCNP
GYMGSKCECTEESVQSSNCKESGALESCSGQGECYCGQCVCHPSSFGRVYGAYCECDDFS
CVRFRGVLCGGHGDCDCGECVCQSGWTGEYCNCSSSRDMCVSEDGALCSGRGKCVCGKCV
CSMPGASGDTCEKCPTCGDTCSSARTCVECHLQAEDEATEECVQRCSVPHVFVNNSTEYD
ESRSTLCTLKSENNCFISFSVVAGDAGSTVYNLKMYDCPEPPNIAMIVLGVSLSILTIGL
ILLGVWKLLISVHDRDEVAKFEAERAKAKWQSGTNPLFRSSTSTFKNVTYKSAGGPKVDI
HSMDGC
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggggattgctgtacttctgctcctgattcttcggcattggatcaacaacgtggaggga
acatgttcggttggcagcgcagtgacttgtgacgagtgtctccagctgggtccccactgt
gcatggtgcacacaagagaatttcacagactcgtttttaattagtgagcgatgtgacacg
ccgtacctcctcctagggagaggctgtccccaggaccaggtagaatttcctgtgaccaac
tccgaggtcctccgggaccagcctctcgggaagaagacggggaatacaaacagcacccag
atttcaccacagaagatggccctcaaactcagaactggcagtgaggtgaccttccagatc
agtgtgcagcagacagaggactaccctgtagacatctactacctgatggacctctcagcc
tccatgattgacgacctggagatgattaaagacttgggctccaccctgtccaaagagatg
gcaaagctcaccagtaaattcagacttggattcgggtccttcgttgagaaaccagtcctc
ccgttcattaagatcactcctggagaactggagaacccttgtaggagtgtggatgagagc
tgtctgccaacgtttggatacaaacacatcctacctctcaccagcagcacagagaagttc
aacaatatcatcaccaaccagcgtgtgtctgccaacatcgacctgccggagtgtggcttc
gatgccattatgcaggctgctgtctgtggggacaagataggctggaggaacgactccatg
cgtctgctggtgtttgtgagcgacgccgactctcactttgggatggacagcaagatgtca
ggcatcgtcgtccctaacgacggggagtgccatctggacagcaacaatgaatactctatg
gctgcccatctggaatacccaactctgggacagctgatggataaactggtggacaacaat
atcctgcttatattcgctgtgacggaaaatcagaaacacaactatgagaactatgcaagt
ttcatacctggtgccacggtgggggttctggaatccgattcaaggaacatcctggaactg
attgtgacggcgtataaagagctgcggtctgagatagaactggaggtactaggagacacg
gaggatctacagatctccttcacagcgatctgtcaggatgggacggtattacctggacag
aaacgatgctccaacgtcaaagctggagacacggtctccttcaacgtgactgtagaactc
tctgagtgtctcgacggtccccagcgtttcctcatcaaaccggtgggctttcaggacccc
ctggagatagacctggagtccctgtgttcctgtgcctgtcagcagacccccgagcccaac
agcagccactgcagtctgggccggggatctctggagtgtggctcctgtctgtgtaatcct
gggtacatgggctccaagtgtgagtgtacggaggagagcgtccagagcagtaactgcaag
gaaagtggcgctcttgagtcctgtagcgggcaaggggagtgttactgcggccagtgtgtg
tgtcacccgtctagttttggacgcgtctacggggcctactgcgagtgtgacgacttctcg
tgtgtgaggttccgaggggtcctctgtggaggtcacggggactgtgactgcggcgagtgt
gtgtgtcagagcggctggacgggggagtactgtaactgcagcagcagcagggacatgtgt
gtgtcggaggacggagcgctgtgcagcggacgggggaagtgtgtgtgcgggaagtgtgtg
tgttccatgcccggagcctctggagacacctgtgaaaagtgccctacctgtggagacacc
tgtagctctgctaggacctgtgtggagtgtcatctccaagcagaagacgaggccacagag
gagtgtgtccaaaggtgcagcgtccctcacgtcttcgtcaacaattccacagaatacgat
gagagccggtccacgctgtgtaccctaaagagtgagaacaactgcttcatctctttcagt
gtggtggctggagacgcagggagcactgtgtataatctaaagatgtacgactgtcctgag
ccccccaacatagctatgatagtactgggggtctctctgtccatcctcaccatcggcctc
atcctgctgggggtgtggaagctgttgatctcagtccacgaccgcgatgaggtcgccaag
tttgaggccgagagggcaaaggctaaatggcagtcgggtacaaaccctctgtttagaagc
tcgacatcaacgtttaaaaatgtaacttataaaagtgcagggggaccaaaagttgatatt
cattcaatggatggctgctga
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