Oncorhynchus mykiss (rainbow trout): 110528967
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Entry
110528967 CDS
T07259
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 10-like protein
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110528967
03036 Chromosome and associated proteins [BR:
omy03036
]
110528967
Membrane trafficking [BR:
omy04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110528967
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
110528967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
IQ_SEC7_PH
WD40_CDC20-Fz
SOS1_NGEF_PH
CFAP43_N
RHG20_PH
DUF7675
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
110528967
NCBI-ProteinID:
XP_036839441
Ensembl:
ENSOMYG00000024238
LinkDB
All DBs
Position
7:complement(54807649..54961056)
Genome browser
AA seq
1003 aa
AA seq
DB search
MDKTRIAFMRKVSFLHKKDHSEDVEDDAGYLDVAVSDVKHPPAQLSPMPEGLSSQQVVRR
HILGSIIQSERSYLESLRRILEEYQSPLLEADPHILSPRKIRLVFYRLREITQCHSMFQI
ALASRVAEWDSSEKIGDLFVASFSKSMVLDVYSDYVNNFTNAMALVKKACMSKPAFLEFL
KMKQASSVDRITLYGLMVKPIQRFPQFILLLQDMLKNTPKGHVDCLPLQLALTELEMLAD
KLNEQKRVADQIAETQQLARSVSDRSLSKQLNSDQGSLVLCETLIETVYGERGQVLKSKE
RKVFLFNDILICANINVKGPLDISSLVPVGPKYTMKWSAPLLQVQVVEVGQEASQETLFQ
HGGGKHPGSACPPGKVILGPPRLYQELLDLQHDLSVVEEVTLLVGTLQGTYQNLNTTVAQ
DWCLALQRLIRIKEDQLQSANKCRLRLQVPGRPDKSGRPVSFMVVFNTPSPLSKISWVNR
LHLAQIAQREENTPGWFCAEDEGNTMSPFWPLLACRVPVFTTKSSDRKFEAALHTPGQFS
AGCTLLPQGYLWVASGGDVTQGQVEIFSLNRPTLRPVKSLQVGAPVRCLEYVPETRPSEE
VEAVAFRSSTGVGNTICLGLDDGSILVYGSVNTEAQCLLNLRNPHSCPVLCLKHCTNFLF
AGLRDGTMMVYRRSNGGELWEPDSSRTVIVGPEPVRTLLVLEDSMWASCANSVTIIEGSS
LATQRFEVHPDPMVTVAHMVRAGGGVWMAFSEGSSIRLFHTETLEHLQEINISTRVSLHN
PGQKSMRVTSLLIYQGLLWVGTVQGIIIILPVPKLEGIPKITGKGMISLNAHCGPVDFLV
ATSSTLSPELLKRDSVADGPDSACGEEDRSYSSSQESLPQSGSSQGRGGGKGLGVLLQYR
LRSTSGLPGRPLTVRGDEASDSSLESLEHSLEDGSIYEFSDNPEMWMQGRPCERDGGRRD
RMISAAVISGGRGFHRLREGTTERAGVESSETTLMMWELPLTV
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaccagaatagcctttatgcggaaagtatccttcctgcacaagaaggaccac
tcagaggatgtggaggatgacgcagggtacctggatgtggctgtgtcagatgtgaaacat
cctcctgcacagctgagccctatgcctgagggactgagcagccagcaggtggtcagacgt
cacatcctgggctccatcattcagagtgagcgcagttatcttgaatccctcaggagaatc
cttgaggagtaccagagccccttgctggaggcggacccacacatcctgagcccacggaag
atccggcttgtattttaccgcctacgggagatcactcagtgtcactccatgttccagatc
gcactggcgtcacgtgtggctgagtgggacagcagtgagaagattggggacctatttgtg
gcctcgttttctaagtcgatggtgctagatgtttatagcgactatgtcaataacttcacc
aatgccatggccctcgtaaaaaaggcatgcatgtccaaaccagccttcctggaattctta
aagatgaaacaggcgtccagtgttgaccggatcaccctgtacggcctcatggtgaagccc
atccaacgctttccccagttcatcctattactgcaggacatgctgaagaacacacctaag
ggtcacgtagactgcctgcctctgcagctggctctgactgaactagaaatgttggccgat
aagctgaatgaacagaagcgtgtggccgaccaaatagctgagactcagcagctagcacgc
agtgtcagcgaccgctcgctcagcaagcaactgaactcagaccaggggtcgctggtgctt
tgtgagacactgattgagacggtgtatggggagcgaggccaggtcctgaagtctaaggag
cgcaaagtcttcctcttcaacgatatcctcatctgtgccaacatcaacgtcaaggggccc
cttgatatcagcagcctagtccctgttggtcctaagtacaccatgaagtggagtgccccc
ctgctgcaggtccaggtagtggaggtgggtcaggaggcctcccaggagaccctgttccaa
catggcggtggcaagcaccctggtagtgcctgtcccccagggaaagtgatcctgggtcct
ccacggctttaccaggaactcctggacctgcagcacgacttgtctgtggtggaggaggtc
acactactggtgggaacactacaggggacataccagaacctgaacacgactgtggcccag
gactggtgtctagctctacagagactcattcggatcaaggaggatcaacttcagagtgcc
aacaagtgccgcttacgcctgcaggtgcctgggagaccagacaagtcgggacgtcccgtc
agcttcatggtggttttcaacacgcccagccccctcagcaagatctcctgggtcaaccgg
ctgcacctggcccagattgcgcagcgagaggagaacacaccaggatggttctgtgcagag
gatgaagggaataccatgtcaccattttggcctttactggcgtgccgtgtgcctgtcttt
accaccaaatcctcggacaggaagtttgaagctgcccttcacactccaggacagttctct
gcagggtgcaccttgctacctcaaggctacctctgggtggccagcggaggagatgtcacc
caggggcaggtggagatattctccctgaacaggcccacactgcgcccagtgaagagcctc
caggtgggggccccagtgaggtgtctggagtatgtgcctgaaaccagaccctcagaggag
gtggaggctgtagccttcaggagctctactggggtggggaacaccatctgtttgggacta
gatgatggaagcatcctggtgtatggcagtgtgaacactgaggcccagtgcctgttgaac
ctgcggaaccctcatagctgccctgttctgtgcctcaaacactgcaccaacttcctgttt
gctgggctcagggatggaaccatgatggtctatagaagaagtaatggaggtgagttgtgg
gagccagactccagcaggactgttattgtgggcccagagccggtgaggacacttctggta
ctggaggactctatgtgggccagctgtgccaactctgtgactatcatcgagggctccagc
cttgccacccagaggtttgaggtacacccagaccccatggtgaccgtggcccatatggtg
cgggctgggggaggagtttggatggcctttagtgagggctcttctattcgcctgttccac
actgagacactggagcatctgcaggaaatcaacatctccacgcgagtatctttgcacaac
ccaggccagaagagcatgcgtgtcaccagcctgctcatctaccaggggctgctgtgggtg
ggcactgttcagggaatcatcatcattctgcccgtgcccaaactggagggcatccccaaa
ataacaggaaaggggatgatctctctgaatgcccactgtggtccggtggacttcctggtt
gccacgtccagcaccctgtccccagagctactgaagagggattctgtggcggacggaccc
gactctgcctgcggagaggaggaccgcagttactcctcctcccaggagtctctgccgcaa
tcaggctcctcccaggggaggggggggggcaaggggctgggtgtgctgctacagtacagg
ttgcgctccacttcggggttgccagggcgaccgctaacggtgaggggcgatgaagcatcg
gactcctccctggagtctttggagcacagcctggaggacgggtcaatctatgagttcagt
gacaacccagaaatgtggatgcagggacgcccctgtgagcgggatggggggcgcagggac
aggatgatttcggcagcggtcatatctgggggcaggggtttccacagactgagggaaggg
acaacggagcgggcgggggtggagtcttcagaaacaaccctgatgatgtgggaactacca
ctgacagtgtga
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integrated database retrieval system
