Oncorhynchus mykiss (rainbow trout): 110529014
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Entry
110529014 CDS
T07259
Name
(RefSeq) laminin subunit beta-3
KO
K06244
laminin, beta 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04382
Cornified envelope formation
omy04510
Focal adhesion
omy04512
ECM-receptor interaction
omy04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110529014
04518 Integrin signaling
110529014
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110529014
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110529014
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
KASH_CCD
GldM_1st
GEMI5_RBS
LIP-1
APG6_N
CCDC39
CCDC61_coil
CCDC18_1st
Prominin
CEP131_C
DUF7121
Laminin_I
Motif
Other DBs
NCBI-GeneID:
110529014
NCBI-ProteinID:
XP_036839879
Ensembl:
ENSOMYG00000044031
LinkDB
All DBs
Position
7:complement(71122628..71141689)
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AA seq
1162 aa
AA seq
DB search
MWILFQLAALTAVAATQRDCSRGACYPPMGDLLLGRGRQLHASSTCGLTGSEVFCTPFGQ
SKMKCCPCDSRNPSSQLAHTIQDVLSTAGPNRWWQARKDVSPVTVQLDLQNLFQLDNLVL
TFKGPRPSALVVERTLDNGNTWQPALYMASDCRSAFPGIAMITPHSLDQTYCYTLPPATT
NPYQDQTIKFSPLRQFSTISIPDGQKIQEVSGLSGLRVRLTNLGAVPRLPGRAPSLFYAL
REMRVMGTCLCHGHANRCLPDTNQLPNTQVSAQCECQHNTAGINCERCADLYNDLPWRPA
EEGDTHTCKRCECNNHSQRCRFDPDVYESSGRRSGGMCESCLHHTTGPKCDRCAPGYQPN
HRSSMDRPDACIRCHCSAEGVENGDQCDDVTGSCRCKANVDGSQCDRCKMGYYGLTASNP
LGCNKCLCSNEGSLSSVCDPVSGQCPCQPHLQGLTCELCSHGYWNPSSPRGCEPCRCDPT
NSHGDTCDQSTGQCQCRSGFGGRTCTECPDNTYGDPLIGCRSCQCAAGGTKPGGCDKRTG
ACRCRLGVTGARCDACTRGHCDSFPDCEVCPSCFFSLDSNIQNLTLGLERLSSRIPSLPG
GSLPTSLGPRIRTLEATLTQIRDSLPLPPPSARQVSDALSQLRRLRVQLDQVDGDLSPQG
RAPELGTQLDELQALLDGLGLVYNTKRDALRNSVNSNNAGAFSSIKDAYDESTDSAKSVD
ASGKTVDQSKAVRKDAIDLQNQVQPANTRDLEKLNHQLNTKPDLTPTAKQVCGSVRFAPC
TPAQCDGELCPAEGAPPCGRGESCVGALPQGTRAVSDAEEVKDRLKQLNGKITQAAAQIQ
ETQDTANKVRQSTDDLDNQMRRARDDLDADLQETRDFVKELKDFLSDPSSDPTHISTVSE
WILNAKLPVSLATLKRKLQEIRDLAAGLPDSTAVLDQAGPQLDIARRLLQEARDARDAAL
GVKADVDGLLEGFTTVEGSLSGLEEKVQESLDIVDDISSNLTQTKAQLSPAVKALGEVSA
LAEGMKPQLEGLRALVRSGDMLAQNATEEADKAKREADAAAKELASLEKQLEQLRAAERT
SGRGDGTGTAGARLQKLQEEAGSLAQDTGDMIKALAGKADSLHSLQDEVLLKSQRLTGLE
AKLLDLLADMRQKVTIFSTCQG
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtggattttattccagctagcagccctgactgcagtggctgcgacacagagggactgt
tctcggggggcctgttacccccctatgggagacctgctcctcggtaggggccgtcagctc
cacgcctcctccacctgcggcctcaccggctcggaggtcttttgcacccccttcggacag
tcgaagatgaagtgttgtccctgtgactccaggaacccatccagtcagttggctcacacc
atccaggatgttctatccactgctggacccaacaggtggtggcaggccaggaaagacgtg
agtccggtcaccgtacagttggacctacagaacctgtttcagctggacaacctcgttctg
acattcaagggtcctcgtcccagtgcgctggtggtggagaggacgctggataacggtaac
acatggcaacctgctctctacatggcctccgactgcagatcggccttccctggcattgcc
atgattacgccacattccctggaccagacatattgttacactctgccccccgccaccact
aacccctaccaggaccagacgattaaattcagccccttgcgtcagttctctaccatcagc
atccccgatgggcagaagattcaagaggtatcaggattgtcaggcctgcgagtgaggctg
actaatctgggtgctgtgccccgcctgccgggccgcgctccctctctgttctacgccctc
agagagatgagagtgatgggcacctgcctctgccacggccatgccaaccggtgtctgcca
gatactaaccagctacccaacacacaggtcagtgctcagtgtgaatgccaacacaacaca
gcgggtataaactgtgagcgctgtgcagatctttacaacgacctgccctggagacctgca
gaggagggggacacacatacctgcaaacgttgtgagtgtaacaaccattcccagcggtgc
cgtttcgacccagatgtgtatgagtcgagcggacggaggagtggaggtatgtgtgagagc
tgtctgcaccacacgactggacccaagtgtgaccgctgtgcccctggataccaacccaat
caccggagcagcatggaccggcctgatgcctgcatacgctgtcattgcagtgctgagggg
gtggagaatggggatcagtgtgatgacgtcacagggtcctgtcgctgtaaggccaatgtt
gatggatcgcaatgtgaccgctgcaagatgggatactacggtctgaccgcctccaaccct
ctgggctgcaacaagtgcctgtgcagtaacgagggctccctgtccagtgtgtgtgaccct
gtgagtggtcagtgtccttgccaacctcatctccaggggctgacctgtgagctgtgttcc
catggttactggaatccatcctctccccgtggttgtgagccctgtcgctgtgaccccacc
aactcccacggtgacacctgtgaccagagtacgggtcagtgccagtgcaggtcagggttc
ggaggtcgtacctgtacagaatgtcctgacaacacctacggagacccactcattggctgc
agatcgtgtcagtgtgctgctgggggcacaaagccaggaggctgtgataagcgtacgggg
gcctgccggtgccggctgggtgtcacaggtgcccgttgcgatgcctgtacccgtggccac
tgtgactccttccctgactgtgaggtctgcccctcctgctttttctctctggactcaaac
atccagaacctcaccctcggcctggagagactctcctccaggattccctctcttcctggg
ggctcgttacctaccagtctgggtccccgcatcagaaccctggaggccactctcacccag
atacgagactctctcccactgccacctccctctgccagacaagtcagcgacgccctctct
cagctccgcaggctaagggtccagttggatcaggtggatggagatttgtcaccccaaggc
agagcccctgagctaggcacgcagctggacgaactccaggctctactggacggcctgggt
ctggtgtacaacaccaagagagatgctctcaggaactccgtcaactccaacaatgcaggg
gccttttcttccataaaggatgcctatgacgagtcaactgactctgccaaaagtgttgat
gctagtgggaagactgttgaccagtcaaaagcagtcagaaaagacgccattgacctccag
aaccaggtccaaccagccaacaccagagacctggagaaactcaaccaccagctgaacacc
aaacctgacctcacacccactgccaagcaggtgtgtggcagcgtgcgctttgccccctgt
acccctgctcagtgtgatggtgagctgtgccctgcagagggggcgcccccctgtggccgt
ggagagagttgcgtcggggctctgcctcaggggacccgggctgtgagtgatgctgaggag
gtgaaagacagactgaagcagctcaatgggaagatcacacaggcggctgcacagattcag
gaaacacaggacacagccaataaggtcagacagtccacagacgatctggacaatcagatg
aggcgggccagggatgacctggatgcagatctgcaggagacgagagactttgttaaagag
ctgaaggacttcctgtcagacccatcatcagacccgacacacatcagcacagtgagtgag
tggatcctgaatgccaagctgcctgtcagtctggctactctgaagaggaagctccaggag
atcagagaccttgcggcaggactcccagacagcactgcggtcttggaccaggctggacca
cagcttgacatcgcccggcgcctgctacaggaggcccgggacgccagggacgcagcgctg
ggtgtgaaggctgatgttgacgggctgttggagggcttcactacagtggagggctccctc
tctggcctggaggaaaaagtgcaggagagcctggacatagtggatgacatcagcagcaac
ctcacacagaccaaggcccagttgtctccagcggtgaaggcgctaggggaggtgtctgcc
ctggctgaggggatgaagcctcagctggaggggctcagggctctggtgcgctctggagat
atgctggcccagaatgcaacagaagaggccgataaagctaagagggaggcagacgctgcg
gccaaggagctggcatccctggagaagcagctggagcagctgcgtgctgcagagaggacc
agtgggcgtggcgatgggacggggacagcaggggctcgtctccagaagctgcaggaggag
gctggttctctggcccaggacactggagacatgataaaggcactagcaggtaaagcagac
tctctgcatagtctacaggatgaggtcctactgaagtcccagaggctgactggcctggaa
gccaaactgctggaccttctggctgacatgagacagaaggtcacgatcttctccacctgc
cagggctga
DBGET
integrated database retrieval system