KEGG   Oncorhynchus mykiss (rainbow trout): 110529014
Entry
110529014         CDS       T07259                                 
Name
(RefSeq) laminin subunit beta-3
  KO
K06244  laminin, beta 3
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04382  Cornified envelope formation
omy04510  Focal adhesion
omy04512  ECM-receptor interaction
omy04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110529014
   04518 Integrin signaling
    110529014
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110529014
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    110529014
SSDB
Motif
Pfam: EGF_laminin Laminin_N EGF_LMN_ATRN LAMB1 KASH_CCD GldM_1st GEMI5_RBS LIP-1 APG6_N CCDC39 CCDC61_coil CCDC18_1st Prominin CEP131_C DUF7121 Laminin_I
Other DBs
NCBI-GeneID: 110529014
NCBI-ProteinID: XP_036839879
Ensembl: ENSOMYG00000044031
LinkDB
Position
7:complement(71122628..71141689)
AA seq 1162 aa
MWILFQLAALTAVAATQRDCSRGACYPPMGDLLLGRGRQLHASSTCGLTGSEVFCTPFGQ
SKMKCCPCDSRNPSSQLAHTIQDVLSTAGPNRWWQARKDVSPVTVQLDLQNLFQLDNLVL
TFKGPRPSALVVERTLDNGNTWQPALYMASDCRSAFPGIAMITPHSLDQTYCYTLPPATT
NPYQDQTIKFSPLRQFSTISIPDGQKIQEVSGLSGLRVRLTNLGAVPRLPGRAPSLFYAL
REMRVMGTCLCHGHANRCLPDTNQLPNTQVSAQCECQHNTAGINCERCADLYNDLPWRPA
EEGDTHTCKRCECNNHSQRCRFDPDVYESSGRRSGGMCESCLHHTTGPKCDRCAPGYQPN
HRSSMDRPDACIRCHCSAEGVENGDQCDDVTGSCRCKANVDGSQCDRCKMGYYGLTASNP
LGCNKCLCSNEGSLSSVCDPVSGQCPCQPHLQGLTCELCSHGYWNPSSPRGCEPCRCDPT
NSHGDTCDQSTGQCQCRSGFGGRTCTECPDNTYGDPLIGCRSCQCAAGGTKPGGCDKRTG
ACRCRLGVTGARCDACTRGHCDSFPDCEVCPSCFFSLDSNIQNLTLGLERLSSRIPSLPG
GSLPTSLGPRIRTLEATLTQIRDSLPLPPPSARQVSDALSQLRRLRVQLDQVDGDLSPQG
RAPELGTQLDELQALLDGLGLVYNTKRDALRNSVNSNNAGAFSSIKDAYDESTDSAKSVD
ASGKTVDQSKAVRKDAIDLQNQVQPANTRDLEKLNHQLNTKPDLTPTAKQVCGSVRFAPC
TPAQCDGELCPAEGAPPCGRGESCVGALPQGTRAVSDAEEVKDRLKQLNGKITQAAAQIQ
ETQDTANKVRQSTDDLDNQMRRARDDLDADLQETRDFVKELKDFLSDPSSDPTHISTVSE
WILNAKLPVSLATLKRKLQEIRDLAAGLPDSTAVLDQAGPQLDIARRLLQEARDARDAAL
GVKADVDGLLEGFTTVEGSLSGLEEKVQESLDIVDDISSNLTQTKAQLSPAVKALGEVSA
LAEGMKPQLEGLRALVRSGDMLAQNATEEADKAKREADAAAKELASLEKQLEQLRAAERT
SGRGDGTGTAGARLQKLQEEAGSLAQDTGDMIKALAGKADSLHSLQDEVLLKSQRLTGLE
AKLLDLLADMRQKVTIFSTCQG
NT seq 3489 nt   +upstreamnt  +downstreamnt
atgtggattttattccagctagcagccctgactgcagtggctgcgacacagagggactgt
tctcggggggcctgttacccccctatgggagacctgctcctcggtaggggccgtcagctc
cacgcctcctccacctgcggcctcaccggctcggaggtcttttgcacccccttcggacag
tcgaagatgaagtgttgtccctgtgactccaggaacccatccagtcagttggctcacacc
atccaggatgttctatccactgctggacccaacaggtggtggcaggccaggaaagacgtg
agtccggtcaccgtacagttggacctacagaacctgtttcagctggacaacctcgttctg
acattcaagggtcctcgtcccagtgcgctggtggtggagaggacgctggataacggtaac
acatggcaacctgctctctacatggcctccgactgcagatcggccttccctggcattgcc
atgattacgccacattccctggaccagacatattgttacactctgccccccgccaccact
aacccctaccaggaccagacgattaaattcagccccttgcgtcagttctctaccatcagc
atccccgatgggcagaagattcaagaggtatcaggattgtcaggcctgcgagtgaggctg
actaatctgggtgctgtgccccgcctgccgggccgcgctccctctctgttctacgccctc
agagagatgagagtgatgggcacctgcctctgccacggccatgccaaccggtgtctgcca
gatactaaccagctacccaacacacaggtcagtgctcagtgtgaatgccaacacaacaca
gcgggtataaactgtgagcgctgtgcagatctttacaacgacctgccctggagacctgca
gaggagggggacacacatacctgcaaacgttgtgagtgtaacaaccattcccagcggtgc
cgtttcgacccagatgtgtatgagtcgagcggacggaggagtggaggtatgtgtgagagc
tgtctgcaccacacgactggacccaagtgtgaccgctgtgcccctggataccaacccaat
caccggagcagcatggaccggcctgatgcctgcatacgctgtcattgcagtgctgagggg
gtggagaatggggatcagtgtgatgacgtcacagggtcctgtcgctgtaaggccaatgtt
gatggatcgcaatgtgaccgctgcaagatgggatactacggtctgaccgcctccaaccct
ctgggctgcaacaagtgcctgtgcagtaacgagggctccctgtccagtgtgtgtgaccct
gtgagtggtcagtgtccttgccaacctcatctccaggggctgacctgtgagctgtgttcc
catggttactggaatccatcctctccccgtggttgtgagccctgtcgctgtgaccccacc
aactcccacggtgacacctgtgaccagagtacgggtcagtgccagtgcaggtcagggttc
ggaggtcgtacctgtacagaatgtcctgacaacacctacggagacccactcattggctgc
agatcgtgtcagtgtgctgctgggggcacaaagccaggaggctgtgataagcgtacgggg
gcctgccggtgccggctgggtgtcacaggtgcccgttgcgatgcctgtacccgtggccac
tgtgactccttccctgactgtgaggtctgcccctcctgctttttctctctggactcaaac
atccagaacctcaccctcggcctggagagactctcctccaggattccctctcttcctggg
ggctcgttacctaccagtctgggtccccgcatcagaaccctggaggccactctcacccag
atacgagactctctcccactgccacctccctctgccagacaagtcagcgacgccctctct
cagctccgcaggctaagggtccagttggatcaggtggatggagatttgtcaccccaaggc
agagcccctgagctaggcacgcagctggacgaactccaggctctactggacggcctgggt
ctggtgtacaacaccaagagagatgctctcaggaactccgtcaactccaacaatgcaggg
gccttttcttccataaaggatgcctatgacgagtcaactgactctgccaaaagtgttgat
gctagtgggaagactgttgaccagtcaaaagcagtcagaaaagacgccattgacctccag
aaccaggtccaaccagccaacaccagagacctggagaaactcaaccaccagctgaacacc
aaacctgacctcacacccactgccaagcaggtgtgtggcagcgtgcgctttgccccctgt
acccctgctcagtgtgatggtgagctgtgccctgcagagggggcgcccccctgtggccgt
ggagagagttgcgtcggggctctgcctcaggggacccgggctgtgagtgatgctgaggag
gtgaaagacagactgaagcagctcaatgggaagatcacacaggcggctgcacagattcag
gaaacacaggacacagccaataaggtcagacagtccacagacgatctggacaatcagatg
aggcgggccagggatgacctggatgcagatctgcaggagacgagagactttgttaaagag
ctgaaggacttcctgtcagacccatcatcagacccgacacacatcagcacagtgagtgag
tggatcctgaatgccaagctgcctgtcagtctggctactctgaagaggaagctccaggag
atcagagaccttgcggcaggactcccagacagcactgcggtcttggaccaggctggacca
cagcttgacatcgcccggcgcctgctacaggaggcccgggacgccagggacgcagcgctg
ggtgtgaaggctgatgttgacgggctgttggagggcttcactacagtggagggctccctc
tctggcctggaggaaaaagtgcaggagagcctggacatagtggatgacatcagcagcaac
ctcacacagaccaaggcccagttgtctccagcggtgaaggcgctaggggaggtgtctgcc
ctggctgaggggatgaagcctcagctggaggggctcagggctctggtgcgctctggagat
atgctggcccagaatgcaacagaagaggccgataaagctaagagggaggcagacgctgcg
gccaaggagctggcatccctggagaagcagctggagcagctgcgtgctgcagagaggacc
agtgggcgtggcgatgggacggggacagcaggggctcgtctccagaagctgcaggaggag
gctggttctctggcccaggacactggagacatgataaaggcactagcaggtaaagcagac
tctctgcatagtctacaggatgaggtcctactgaagtcccagaggctgactggcctggaa
gccaaactgctggaccttctggctgacatgagacagaaggtcacgatcttctccacctgc
cagggctga

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