Oncorhynchus mykiss (rainbow trout): 110529018
Help
Entry
110529018 CDS
T07259
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04260
Cardiac muscle contraction
omy04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110529018
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
110529018
04261 Adrenergic signaling in cardiomyocytes
110529018
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110529018
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110529018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
MCP-like_PDC_1
SepSecS
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
110529018
NCBI-ProteinID:
XP_036839892
LinkDB
All DBs
Position
7:complement(71536345..71612388)
Genome browser
AA seq
1096 aa
AA seq
DB search
MLVKMLWNWKILVSHVYCASFLLFWIILGTAVVEVIGSQQGIPLSVVKLWASAFGGEMKS
ISAKYSGSQLLQKKYKELEKSVRVEEIDGMKVVKNLSKKMEEMFRKKKEAIRRLVEAAEE
AHLQHEENPELQYEYFNAVLINEVDEEGNNVELGGEFVLEPNEHFNNLSVNLSLSVVQVP
TNMYNKDPAIVNGVYWSEALNKVFVDNFEKDPSLIWQYFGSAKGFFRQYPGVKWHPDEHG
VIAFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNII
AYNQEIHYVEPCLNGTLVRADRNNKAHFREHLDKLFAKGIGLLGDALTEAFTILNDFNQT
GHGSVCSQAIMLVTDGATQMYDDVFAKFNWPDRKVRIFPYLIGRESAFADNMKWMACANK
GYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYMDSTGSIILSQAHKSRNKK
GPSLMTTVAMPVFSTKNETKNQGILLGVVGTDIPLQELMKIIPKHLLGIHGYAFAITNNG
YILTHPDLRPLYQKGQKRRKPNYSSVDLSEVEWEDKDDFLRNAMVNRKTGTFSMEVKKTV
DKGKRLLKMHNDYYYTEVKGTPFSVGVALSRGHGKFFFRGNVSVEAGLHDLEQPDVALAD
EWTYCNTDEYNEHRSLSQIQAIKLYLTGRKPLIKCDRELIQEVLFDAVVTAPLEAYWTGL
ALNKSENSDKGVEIAYLGTRTGLSRTNLFVVQEDLSNQDFLTAEDKEGVFNADHFPLWYK
RAAEQVPGTFVYSIPFGGNENKSVVLASTAIQLLDDRKSPIVASVGIQMNLNFFQRKFWT
ASRQCAALDGKCTISCDNEDIKCYLIDNNGFILVTEDYSQTGEFFGEVEAAVMTKLLLIG
SFKRINLYDYQALCREYAGSSDSGHCLSHPFSIVKWLLTELVIFLLEFNLYSWWHVDLSV
KAQNSRGKTMLVPCDTEYPAFVSERTIKETTGNIDCEGCVRSFVIQQIPSSNLFMVVVDN
KCDCSSTLPVSMDPIEIMYNESLKCDRLKFQKDRKRPESCHPFHPEENAMECGGAAGLSA
PLTGALLSLLATLFTR
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgaagatgctgtggaattggaagatcctcgtttcgcacgtgtactgcgccagc
ttccttctcttctggattatactgggcacggcagtggtggaagtgatagggtcccagcaa
gggattcctctctcagtggtgaagttatgggcctcagcgtttggtggagaaatgaaatca
atttctgcaaaatactctggatcccagctgctgcagaagaaatataaagaattggaaaag
tctgtccgagtggaagaaattgatggcatgaaagtggtcaaaaatctatcgaagaagatg
gaggagatgttccggaagaaaaaggaggccattcggaggctggtggaggcagcagaagag
gcacatctacagcacgaggaaaacccagagctgcagtatgagtacttcaacgcggtgctg
atcaacgaggtggatgaggagggcaacaacgtggagctgggaggagagtttgtcctcgaa
cccaatgaacacttcaacaacctgtcagtcaacctcagcctcagtgtggtgcaggtgccc
accaacatgtataacaaagatcctgccatagtgaatggggtgtattggtcagaggccttg
aataaagtgtttgtggataactttgaaaaagatccgtccctgatatggcagtactttggc
agtgccaagggcttctttaggcagtatcccggggtcaaatggcatccagacgaacacgga
gtcatcgcctttgactgcaggaacaggaaatggtacatccaggcagcgacatctcctaaa
gacgtggtgattctagtagatgtgagtggcagtatgaagggcctgagactgaccatcgcc
agacagactgtctcctctatactggacacactgggagacgacgacttcttcaacatcatc
gcttacaatcaagagattcactatgtggagccttgtctgaatggtacactggtacgagca
gacagaaacaataaagctcattttagagaacatctggacaagctgtttgccaaagggatt
ggtctgctgggtgatgctcttaccgaagcattcaccattctaaatgattttaaccagact
gggcatggcagtgtgtgtagccaggccatcatgctggtgactgacggggccacccagatg
tacgatgatgttttcgccaagttcaactggccagacagaaaggtgcgcatattcccttac
ctgattggccgagagtctgcctttgctgataacatgaaatggatggcctgtgctaataaa
gggtatttcagtcagatctccacacttgctgatgtacaggaaaatgtgatgaggtatctt
catgttatgagtcgtcctaaagtcatcgatcatgaacatgacacggtctggacagaggcc
tacatggacagcactgggagtatcatactctcccaggcacacaagtccagaaacaagaag
ggccccagcctgatgaccactgtggccatgcctgtgttcagcaccaagaatgagacgaag
aaccagggtattctcctaggggtagtgggaacagacattcccctacaggaacttatgaag
atcatccctaaacacctgctgggtatccacggttacgcgtttgccatcactaacaacggc
tacatcctgacccatccagacctgaggccactgtaccagaagggccagaagaggaggaaa
cccaactacagcagtgtggacctgtctgaggtggagtgggaggacaaggatgactttctg
cgtaatgccatggtcaacaggaagactgggactttctccatggaagtgaagaagacagtg
gacaaagggaaacgtctgctgaagatgcacaatgactactactacactgaagtcaaggga
acgcccttcagtgtcggtgtggctttgtccagaggccatggcaaattcttcttcagagga
aacgtctccgtagaagcagggcttcatgacctggaacagccagatgttgcgctggcagat
gaatggacgtactgcaacacagacgagtacaatgagcaccgttctctctcccagatccag
gctattaaactctacctgaccggacgcaaaccactcatcaaatgtgacagggagctgatc
caggaggttctgtttgatgctgtggtcacagccccactggaggcctactggacaggcctg
gccctcaacaagtcagagaattcagataaaggtgtggagattgcttacctgggcacacgc
actggcctctctagaaccaacctgtttgttgtgcaagaggatctatccaatcaagacttc
ctgacagcggaggataaggagggggtgttcaacgctgaccacttccctctgtggtataag
agagcagcagagcaggtccctggcacctttgtctactccatcccctttggaggaaatgag
aataagagtgtggttttggccagcaccgccatacagctgctggatgacaggaagtcaccc
attgttgcatccgttgggattcaaatgaacttgaatttctttcagaggaagttctggacc
gctagcagacagtgtgctgctctggatgggaagtgcaccatcagctgtgataatgaggac
atcaagtgttacctcatagacaacaacggctttattctggtcacagaagactactctcag
acaggggagttctttggcgaggtggaggctgctgttatgaccaagcttctcctcattggc
tccttcaagaggatcaatctgtatgactaccaggctctctgtagagagtatgctggcagc
agtgacagtggacactgtttatcgcatcccttctccattgtgaaatggctcctgactgaa
ctagtaattttcctgctggaattcaacctgtacagctggtggcatgttgacctctctgtc
aaagcccaaaactcgaggggaaagaccatgttggtgccatgtgatactgagtaccctgcc
tttgtctctgagcgtaccatcaaagagaccacgggcaacattgactgtgagggctgtgtc
agatcttttgttattcagcagattcccagcagtaacctcttcatggttgtcgtggacaac
aaatgtgactgtagctccacccttccagtttccatggaccccattgagattatgtacaac
gaatctctgaaatgtgataggctgaagtttcagaaggacaggaagcggccagaatcatgt
catcctttccacccggaggagaatgccatggagtgtggaggagcagcaggcctgtctgcc
cccctcacaggagcactgctctccctgctagccactctcttcaccagatga
DBGET
integrated database retrieval system
