Oncorhynchus mykiss (rainbow trout): 110529121
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Entry
110529121 CDS
T07259
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110529121
Membrane trafficking [BR:
omy04131
]
Endocytosis
Others
Others
110529121
Endosome - Lysosome transport
110529121
Endosome - Golgi transport
110529121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
110529121
NCBI-ProteinID:
XP_021466940
Ensembl:
ENSOMYG00000014856
LinkDB
All DBs
Position
1:73952690..74008104
Genome browser
AA seq
1247 aa
AA seq
DB search
MVVSGSVWCWALLTCILISFYNMLTAYAEISWPASSTTTNVWFNRMDKLPLELRANLKSA
WVKVPKYIDKESTFSRDFRMETIDGKAVVPKGEEKLPKDLDGVNGKVPPDAVSTVRDKKA
PNRSKHFTADSKKSDSSFEVKDGTFASSNRTRTKRSTSFGEYSDRSQIGGPGDAFSAEKL
VEPLQGVYSSRTEYRRTGEDARTSPRQSEPLLVTSTFPLSGDSAHNQAMGHWVGENSSVI
LTLTKQYDFNLGAFTESSLWRSVDYGSTYIKLNKKVGSTLACLYVCPTNKRKIMMLSDPE
LEQSVLISSDEGASFEKYPINFYMDGLLFHPTQENWLLASSPDNKVYSTMDFGRKWQLVS
ENVTPGRFFWAQTGLDREADVVHMETHIAKGRAQYVKCRAQRCTESNRQYLFPGYIDKNS
LVVQDNYVFVQVTKSGQASYFVSYMRESFKRIQLPKYCLPKDMHIISTNEKQVFSAVQEW
NQNDTYSLYISDSPGVYFTLSLENLRTRREPGGNLLVDLYKVEGINGIFLANKLVGHEVK
TFITYNKGQTWALLQAPNTDVAGNSLHCILPFCSLHLHLDTPVNPYLPGRIFSMDSAPGI
IVATGNIGTELSSANLGMFITSDAGNTWRQIFEEELGVWFLDNGGALVAVSLVATVPIRH
VWVSLDEGKKWDRHSFSLAPLFLDGVLMQPENHIITFTGHLSRVSEWQLIKIDYKAIFSR
RCMDGDYQTWHLHNKGEPCVMGEKQTFMKRRPGNRCMLAQDYSRVISSEPCICRTYDFEC
DYGYERQADGKCTPAFWFNPSTVTRSCSTSHNYLNSTGYRKVLSNNCKEGGKDVYSPRKQ
HCSPRPPRGLRLTTSQGELTATVGSNVTFLVYLDDGNSLWTYIQLDFGDGITFMYNLSRR
GDGIKHSYREDGIFRVTAHAENSQGYDISSLFLHITSPVERVYLSAPIVAIRKKEANLTA
VVWPVHHRTLTFFWWFENSSEPLITLDGSISYTFWKEGMNRIMVQVSSGCNILQDTKVII
VKDFFKSLLLSFSPALDEHNPDIPEWREDVGRVVRTAVSQVSGFPEERLLVSLFPGVPTT
AELFILPETQLPEHGKRNKEDLVSISNLVINALNHGLVQFELKADTQIFVFITQLTLAPL
VYSNPIHSSSVMLMLLSVVFVGLAAFFIFKLKRKIPWIHVQAEENQEKEPEMIGTVGQNN
TMSKMKLSEFPTEKELMEKELKTRSRGEYGRNGERVITREFPTCTNV
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtctcggggtcagtttggtgttgggctcttttgacttgcattttaatctctttt
tacaatatgttgacggcatacgctgaaataagttggccagcgagttctacgacgacgaac
gtttggtttaaccgtatggataaattgcctctggagctgcgcgcaaacctaaaatccgca
tgggtcaaagtcccaaagtatatcgacaaggaatccacattttccagagattttagaatg
gaaacaattgatggaaaagccgtagttccaaaaggtgaggagaaattgccaaaggacttg
gacggagttaatgggaaagtgccaccagacgctgtatctactgtcagagataaaaaggcg
ccaaaccgttccaagcattttactgctgacagcaaaaagtcagacagttcctttgaagtt
aaagacggtacatttgcttcaagtaaccgtacgaggacaaagcgaagcacatcatttggc
gaatattcggacaggagtcaaatcggaggtcctggtgacgcattttcagccgagaagctt
gtggagcctttacaaggcgtttacagttcgaggacagaataccgacgaactggggaggac
gcaagaactagcccgaggcaaagtgagccgcttctggttacctccactttccctctgtcc
ggagactctgcgcacaaccaggcaatggggcactgggttggagaaaacagcagcgtgatc
ctgaccttgacgaagcagtatgactttaacttgggtgctttcactgagagttctctgtgg
agatcagtggactatgggagcacttatataaaactgaataaaaaggttgggtcaaccttg
gcttgcctatacgtctgcccaaccaacaagagaaagataatgatgcttagcgacccagag
ctggagcaaagtgtactcatcagctcagatgaaggtgccagcttcgagaagtatcccatt
aacttctacatggacggtctgctgtttcatccaactcaggaaaactggctgctggctagc
agtcctgacaacaaggtgtacagcacaatggattttggaagaaaatggcagttggttagt
gagaatgtaactcctggccggttcttctgggcacaaactgggctagacagagaggcagat
gtggtccacatggagacccacatcgccaaaggacgtgctcagtatgttaagtgcagagct
caacgatgcacagaatcaaacagacaatacctgttcccgggatacatagacaaaaattct
ctggttgttcaggacaactatgtgtttgttcaggttaccaagtcagggcaagcgagttac
tttgtgtcctatatgagggaatcatttaagcgaattcagctacccaaatactgtcttcct
aaggacatgcacatcatcagtacaaatgagaagcaggtgttttctgctgtacaggagtgg
aaccagaatgacacctacagcctgtatatctcagactctccaggggtatacttcactctg
tctctagagaacctccggaccagaagagagccaggtggaaatttactggtcgacctgtat
aaggtagaaggaataaatggcatatttctagccaacaaattggtgggccatgaagtgaag
acattcatcacctataacaagggtcagacctgggccctgctgcaagcccccaacactgat
gtggctggaaacagtctgcactgcatcctgccattttgttctctgcatctgcacctggat
acgccagtgaacccttacctgcctggacgcatctttagcatggactcagcacctgggatc
attgtagctacaggcaacattggtacagagctgtcctccgctaaccttggaatgtttata
acatctgatgcaggaaatacctggagacagatttttgaagaagaactcggtgtttggttt
cttgacaatggaggtgctttagttgcagtttctttagttgcaacagtacccatccggcac
gtatgggtaagtctggacgagggtaagaaatgggatcgccacagtttctctctggctcct
ttgtttctggatggagttctcatgcagccagagaatcacatcatcactttcactggacac
ttaagccgtgtttcagaatggcagctgataaagattgactacaaagccatctttagcagg
agatgcatggatggagattatcagacttggcacctacataacaagggagagccatgtgtg
atgggagagaagcagacctttatgaaacggaggccgggtaaccgctgtatgctggcccag
gactactcccgagtcatatcctcagaaccatgcatctgcaggacatatgattttgaatgt
gattatgggtatgaacgtcaagccgatggaaagtgtacccctgctttttggttcaaccca
agcactgtgacaagaagctgtagcactagccataactacctcaacagcacagggtacaga
aaggttttgtccaataattgcaaagagggagggaaggatgtgtactcccccaggaaacag
cattgttcccccaggcctcccagaggcctcagactgactaccagccagggagagctcacc
gccaccgtgggcagtaatgtcaccttcctggtgtatctggacgatggaaactcgttgtgg
acttatatccagctagactttggggacggcatcactttcatgtacaacctgagccggaga
ggcgatggaatcaaacacagctatagagaagatgggatcttcagagtgacagcacatgca
gagaacagccagggctatgacattagctccctgttcctacacatcaccagcccagtggag
cgtgtgtatctctcagctcctattgttgccatcaggaagaaagaagctaacctaacggct
gtggtctggcctgtccaccacagaacactcaccttcttctggtggtttgaaaacagctcc
gagcccttaataaccttggatggaagcatctcgtacacgttttggaaggaaggcatgaac
aggatcatggtccaagtgtcttctgggtgcaacatactgcaggataccaaggtcatcatt
gtcaaagatttcttcaaatccctgctgttatcgttctctccggctttggacgagcacaac
cctgacatcccggagtggagagaggacgtgggccgcgtggtgaggacagctgtatcacag
gtttctggatttccagaggaacggctgttagtatctttgtttccaggtgttccaacaaca
gcagaactatttatcctgcctgagacacagttgcctgaacatgggaagcggaacaaagag
gacttagtgagtatatcaaaccttgttataaatgccctgaaccacggattggtccagttt
gagttgaaagctgacactcaaatatttgttttcatcacacagctaactttggcacctctg
gtttactccaaccctattcacagtagctcagtcatgctgatgttgctgtctgtggtgttt
gttggtttagctgcgtttttcatcttcaagttgaaaaggaaaatcccttggatccatgtc
caggctgaggagaaccaggaaaaggagccggagatgattggcacggtcgggcagaacaat
accatgtccaagatgaagctcagtgagttccccacagagaaggaactcatggagaaagaa
ctgaagaccaggagcagaggagaatatggaagaaatggggagagagtgatcacaagagaa
tttcctacttgtactaatgtctaa
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