Oncorhynchus mykiss (rainbow trout): 110529136
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Entry
110529136 CDS
T07259
Name
(RefSeq) VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110529136
Membrane trafficking [BR:
omy04131
]
Protein recycling
Others
Others
110529136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
110529136
NCBI-ProteinID:
XP_021466949
Ensembl:
ENSOMYG00000015268
LinkDB
All DBs
Position
1:complement(74011991..74062308)
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AA seq
1271 aa
AA seq
DB search
METTVGCCPHWLIAMWMCLFTLTSTLDMTKTNIRCIPSSQLSVIKPAPRELSKVGFDQFG
KGPEDEAVGVAEKSPGCHPFKSICKKANVAEYLARVSGDGEARSSVPESEQPFVNKSYSR
GLEERRLVDSSEVLYQHQSGSGITSKLTDRPMPPPATLNKVTVNNTRHNTINSFGRENRL
KRHELSKKKAGASLRNLRRRRKRSFQTAESKTSWSVFGWNGEDASTPGQHELKLSSSTFA
LTGDSAHNQAMVHWSGQNSSVILMLTKYFDFSLGSVTESSLWRSTDYGSRYEKLDEKVGP
KTILSYLYVSPNNKRKIMLLTDPEVESSLLISFDEGASYQRYHLAFDILSLLFHPEQEDW
ILAYSHDQKLYVSVEFGRRWQLVHDSVVPNRFYWSKLGLDKEPGMIHLETSVSDRRSQYI
TCKLQNCTEANKGRPFPGFISPDSLVVQDQYVFIQVPMGGRPVHYVSYKRNAFFPMKLPK
YTFPKDLQIISTDDNQVVAAVQDWHQNDSYNLYMSEAHGLFFTLALENVVSSGGPEGNVM
IDLYEVAGIKGVFLSNKVVENEVKTFITYNKGRDWRLLHAPTTDLSGTRLYCVQPYCSLH
LHLHVSDNPYTSGNIVSKESAPGIIVASGTIGPELTANNVSIFITSDAGNTWREVFEEEY
SILFLNQGGALVAIRHTPLPIRHIWLSFDEGRHWNKFSFTSSPLYVDGVLGEPGEDTLIM
TIFGHFSHRSEWQLVKIDFRPIFNRRCTTDDYQTWQLHNDGKVCIMGVKRIFQNLKPDAR
CVKTKDQYISQMSDSCPCTEADFECDFGFERQSDGGCTAAFWFVPSSVSRDCTTGDSFLN
TTGYRKALSNNCTAGTLGKYRIRRQRCLHQAPRGLQLVTSEGTLTATLGDNVTLLVFLEE
GDGSTTSITVDFGDGTAISYANISSIEDGVKHTYSKVGIYQVAAMALNSLGSERVLLYLH
VTCTLEQVQLSAPSVVVRNKAVDLSTVLKPRYVGTVTYYWWFNNHTEPVVTLVGGMSFTF
YKEGTHTVTVQVSAGNTVLQDKITVAVYEYFRSHVLAFSSNLDAFNPAVAEWRQDISRVV
KDSMVQVTGINGEQLLVSVLPGLPTAAELFIIPEKRPTEGTMNRKGTHLEQLSQVLLSAL
NQDLIQFTLRPGVQVNVYPTRLSPAPLVDTSESGHNGAAVIMLVSVVFVGLAVFVIFKFK
RKIPGINIYTEERSEKQQEVIPTVASIAVPNPEGDMVTSLEHLDTGPDARGIGYLPSLTD
IKLSDETPHVF
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaccgtcggttgctgccctcattggctcattgctatgtggatgtgtcttttt
actttaacttccaccctggacatgacaaaaacaaatataaggtgcattccatcaagccaa
ctctctgttatcaagccggctccccgggaactctctaaagtgggatttgatcaatttgga
aagggaccagaggatgaagctgtgggggttgcagagaagtcaccaggttgtcaccccttt
aaaagcatctgtaaaaaagccaatgttgcggaatatttagcgcgcgtctccggtgatggc
gaggcaagaagttcagtccctgaatccgagcagccgtttgtaaataaatcatacagccgt
ggattagaagaacgtcggctcgtggacagttctgaagtgctctatcaacatcaaagtggc
tcgggcatcacctccaaactcacagataggcctatgccgccacctgccaccctcaataaa
gtaaccgtcaataacactagacataatacaattaatagttttggaagagaaaatagactt
aaacgacatgagttatcaaaaaagaaggctggggcaagtttgaggaaccttcgccgtcga
cgaaagcgcagcttccaaacggcggagagcaaaacatcttggtccgtattcggatggaac
ggtgaagatgcgtcaacccccgggcaacatgagttgaaacttagtagttctacattcgca
ctcacgggggattcagctcataaccaagccatggtgcattggtccggccaaaatagcagc
gtgattctaatgctgactaagtactttgacttcagccttggcagtgtcacagagagctct
ctatggaggtcaacagactatggatccaggtatgagaaacttgatgaaaaggtcgggcca
aaaaccatactaagctacttgtacgtgagtccgaataacaaacgaaagatcatgttactg
accgacccggaggtggagagcagcctgctcattagctttgacgagggcgcatcctatcag
aggtaccacttagccttcgacatcctcagcctcctcttccaccccgagcaggaggactgg
atcctggcttacagccacgaccagaagctctacgtctcggttgaatttggaagacgatgg
cagctcgtacatgacagtgtggtccccaacagattttactggtcaaaactgggtttggac
aaagaaccaggaatgattcacctggagacaagtgtttctgacagacgatcccagtatata
acatgcaagctgcagaactgcacagaggccaacaaaggcaggcctttccctgggtttatc
agcccggattccctggtggttcaggaccagtatgtattcattcaggtaccaatgggtggt
cggcctgtccattatgtgtcatacaaaagaaatgctttcttccccatgaagctgcctaag
tacacatttccaaaggacttgcagataatcagcacagatgataaccaggtggtggcagca
gtgcaggattggcaccagaatgactcctacaacttgtacatgtcagaggcccacggtctc
ttcttcactctggccctggagaatgtagtgagcagtgggggaccagagggcaacgttatg
atagacctctatgaggtagcagggataaaaggggtgttcttgtcaaataaagttgtcgag
aacgaagtgaaaacatttatcacttacaataaggggcgagactggcgtctactacatgct
cctaccactgatctgagcggtaccagactctactgtgtacagccttattgttcattgcac
ctgcatctccatgtgtctgacaacccgtacacatctggaaacatagtcagcaaagaatca
gctccaggaattatagtagcatcaggtaccattgggcctgagctgactgccaataatgtc
agcattttcatcacctcagatgctggcaacacttggagagaggtatttgaggaggagtat
agcatcctctttcttaaccagggcggtgccctagtggccattcgacacacaccgctcccc
atcagacacatttggttgagttttgatgagggaagacactggaacaaattcagctttacc
tcctctcctctctatgtagacggagtcttaggagagccaggggaggacaccctcatcatg
acaatatttggccatttcagccatcgttctgaatggcagcttgtcaagattgacttcagg
cccatcttcaacagaaggtgcaccacagacgactatcagacctggcagttacacaatgac
ggtaaagtctgcatcatgggagtgaagagaatcttccagaatctgaagcccgacgccaga
tgtgtcaaaaccaaagatcagtacatctcccagatgtcagactcctgtccatgcactgag
gctgactttgagtgtgattttggctttgagaggcagagtgatggaggatgcactgctgcc
ttctggtttgttccatcctccgtgtccagagactgcaccaccggagacagcttcctaaac
actacaggataccgtaaggctctgtccaataactgcactgcgggaacccttgggaagtac
cgcattaggaggcagaggtgtctccaccaggcccccaggggtctgcagctggtcaccagt
gagggaacactcacagccaccctgggggacaacgtgaccctcctggtgtttctggaggag
ggtgatggctccacaacaagtataacagtggactttggagacgggacggccatatcctac
gctaacatcagctccatagaggatggggtcaaacatacctacagtaaagtcggcatttac
caagtggctgctatggcactcaacagcctgggctctgagagagtcttactatacctgcat
gttacttgtacacttgagcaagtgcagctttcagctccctctgtggttgttaggaataaa
gcagtggatctatcaacagtcctgaagccacgttatgttggaacagtcacctactactgg
tggttcaacaaccacactgagcctgtcgtgactttagtgggaggaatgtccttcaccttc
tacaaggagggaactcatactgtcaccgtgcaagtgtcagcaggcaacactgtccttcaa
gacaaaataactgttgcagtctatgaatatttccggtcacacgttttagcattctcctct
aatctggacgccttcaatcctgctgtggctgaatggagacaggacatcagtagagtggtc
aaggactccatggtccaagtcacagggatcaatggagagcagcttctggtgtcagtgctc
ccagggttgccaacggcagcagagttgtttatcatcccagagaaaaggccaacagagggg
acaatgaatagaaaagggacacatttagagcagctttctcaggtcctgctaagtgccctg
aaccaagacctcatccagtttactctgcggcccggggttcaggttaacgtttaccccaca
cgactgtctccagctcctctcgtggacaccagtgagagtgggcacaatggtgctgcagtc
attatgctagtgtctgtagtatttgtgggtttggcagttttcgttatcttcaagttcaaa
aggaagatccctggcatcaacatatacacagaggagaggtcagagaaacaacaggaagtg
atccctacggtggcgtccatagctgtcccaaatcctgagggagacatggtgacctctttg
gagcacttggacacagggccagatgcacgtggcataggatacctgccatctctcacagac
atcaaactctctgatgaaactccccatgtgttttaa
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integrated database retrieval system
