Oncorhynchus mykiss (rainbow trout): 110529302
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Entry
110529302 CDS
T07259
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110529302
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110529302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110529302
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
SR proteins
110529302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
PRP38_assoc
SET_assoc
Motif
Other DBs
NCBI-GeneID:
110529302
NCBI-ProteinID:
XP_021467094
Ensembl:
ENSOMYG00000004078
LinkDB
All DBs
Position
8:complement(7400907..7414301)
Genome browser
AA seq
335 aa
AA seq
DB search
MSGCRIFVGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGDRGGGGGGGGGGGGGGGGGGGRFPDRYGRGSQDSRR
TNQPSGQPADRNPPPMRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGV
VEFASYSDLKNAVEKLSGKEINGRKIKLIEAAKKRGSRSRSRSESSSRSRSRNRSPSRSR
TPRRSRSHSPKRDYNRSRSRSHSGSPAPRGGAGGAAPGSPPPRAKETSSTSSKRPSKPSK
SASPHSPPPAQRAPSRSPSRSRSRGSRSPSTDSRH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgccgcatatttgtgggccggttgaacccgtccgccagagagaaggacgtg
gagagattctttaaaggatacggtcgcatccgagacatcgacctcaagaggggctttggt
tttgtggagttcgatgatcccagggatgctgaggatgccgtttatgagctggacggcaag
gagctctgcaacgagagggtaaccattgagcatgcccgagtgcgcctgcgtggtggccga
ggacgcggtggggacagaggcggcggcggaggaggaggtggtggtggagggggaggagga
ggagggggtggtggccgtttcccagatcgctacggccgtggctcccaggatagtcggagg
acaaaccaaccaagtggacaaccggcagataggaaccctcctccgatgcgtacagagaac
cgtctcatcgtggagaacctgtcatctcgtgtcagctggcaggacctgaaagatttcatg
agacaggcgggggaagtcacctttgcagatgcccaccgccccaagctcaacgaaggggtg
gtcgagttcgcttcttacagcgatctgaaaaacgctgttgagaagctgtctggcaaggag
atcaatggaaggaaaatcaagctgatcgaggcagctaagaagaggggttccaggagtcgc
tcccgttcagagagctcctctcgttcccgttcccgtaaccgttccccgtcccgctccagg
acaccccgtcgttccaggtcccactcccccaagagggactacaaccgctcccgttctcgg
tcccacagcggctccccggccccccgtggtggtgcaggaggagccgccccaggttcccca
ccgcccagggccaaggagacctcctccacttcctccaaacggccctccaagcccagcaag
tctgcctctccccactcccctccccctgcacagcgtgcaccttccaggtcaccttccagg
tctaggtctcgtggctctcgttccccgtccacagacagccgccactga
DBGET
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