Oncorhynchus mykiss (rainbow trout): 110529361
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Entry
110529361 CDS
T07259
Symbol
efhc1
Name
(RefSeq) EF-hand domain-containing protein 1 isoform X1
KO
K23029
EF-hand domain-containing protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110529361 (efhc1)
04812 Cytoskeleton proteins [BR:
omy04812
]
110529361 (efhc1)
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110529361 (efhc1)
Cilium and associated proteins [BR:
omy03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
110529361 (efhc1)
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
110529361 (efhc1)
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
EF-hand domain-containing proteins
Other EF-hand domain-containing proteins
110529361 (efhc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DM10_dom
Motif
Other DBs
NCBI-GeneID:
110529361
NCBI-ProteinID:
XP_021467174
Ensembl:
ENSOMYG00000005108
LinkDB
All DBs
Position
8:11130553..11142779
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AA seq
561 aa
AA seq
DB search
MSINTGHGLPFLPGNTFRDVTKSAHHRPQTLSYKNGYALPHRPKVGIGQAPLLSSELTQS
EINQFSSQTSALTYGTPHYSPALDVIPAHVAYDKKVLRFYGYFQQEVLHSPQEGYRVRPV
VLYYYLEDDSMCIIEPVVENSGIPQGKLIKRQRLPKNDRGDHYHWKDLNVGMDLVVYGTV
YRVTHCDSYTQDFMESEGLVLNDPEPTPVDPYIQRRTQAGRSYITPSVFDRLHQFLTMDR
KVLRFFALWDHTDSLYGEARPVTIQYYLVDDSVEIREVHEPNSGRDPFPVLLRRQRLPKN
IKPACKPFPSCVLEVSPQEVHQYYSPKDFQVGETLQLMGRRFLLYDCDEFTKTYYQKNHP
DLELKPKPVVKKTTELHDRHEVPPYNGFGSLEDSLQNCLSLIPEPPKKDLMKMLENDHKV
LRYAARMDSQNPQDEGRLFIFSYFLSSDMISIFEKSTRNSGIISGQFLEKTRIPKPGCTV
DKPEFYGPADFAIGDTVEVFRHRFVLTDADPYVLNYLESISDQLPSRTLNSLRQRLGVAD
QEVDPHTDPPSEDIGRVEASS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaacacgggacatggcttgccatttttgccaggaaacacctttcgggatgtt
acgaagtcagctcaccatcgtcctcaaaccctgtcctataagaatggctatgccctgccg
caccggcccaaggttggcatcggacaagcccctctcctgtccagtgagctgacccagagt
gagatcaaccagttttccagtcagacgtctgctctcacctatgggaccccccactacagc
ccagctctggacgtcatccctgctcatgtcgcttatgacaagaaggtgctgcgcttctat
ggctacttccagcaggaggtgctgcactcgccccaggagggttaccgcgtgcgccctgtg
gtcctttactactacctggaggacgacagcatgtgcatcatagaaccggtggtggagaac
tctgggataccacagggcaagctgatcaagcgccagaggctgcccaagaacgaccgcggc
gaccactaccactggaaagatctcaacgtgggcatggacctggtagtgtatggcaccgtc
taccgcgtcacacactgtgacagctacacacaggacttcatggagagcgagggtctggtt
ttgaacgaccctgagccgaccccggtcgacccgtacattcagcggcgcacccaggctgga
cgctcctacatcaccccatctgtcttcgaccgcctccatcagttcctcaccatggaccgc
aaggtgctgcgtttctttgcgctgtgggaccacactgactctctgtacggggaggccagg
cctgtgacaatccagtactatctggtggatgactcagtggagatccgagaggtccatgag
cccaacagtggccgggacccctttcctgtgctgctacgcagacagaggctgcccaagaac
atcaaaccagcctgcaagcccttccctagctgtgtactggaggtgtccccccaggaggtg
caccagtactactcgcccaaggacttccaggtgggcgagaccctgcagctgatgggccgg
cgcttcctgctctacgactgtgacgagttcaccaagacctactaccagaagaaccacccc
gacctggagctcaaacccaaacctgtggttaagaagaccacagagctgcatgacaggcat
gaggttcctccctacaatggttttggttcactggaggactcccttcagaattgcctgtct
ctgatccctgagccccctaagaaggatctgatgaagatgctggagaatgaccacaaagtt
ctgcgctacgctgccaggatggactcccagaatccccaggacgagggccgcctcttcatc
ttctcctacttcctgtccagtgatatgatcagcatcttcgagaagtccacgcgcaactcc
ggcatcatcagcggccagttcctggaaaagacacgcatccccaagccgggctgcaccgtg
gacaagcctgagttctatggcccggccgactttgccatcggagacaccgtggaagttttc
agacaccgctttgtactgaccgatgctgacccctacgtgctgaattacctggagtccatc
tcggatcaactcccctctcgcaccctgaactccctgagacagaggctgggcgtggctgac
caggaggtggacccacacaccgacccgccgtcagaggacattggaagagtggaagcctct
tcttga
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