Oncorhynchus mykiss (rainbow trout): 110529398
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Entry
110529398 CDS
T07259
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110529398 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110529398 (capn3b)
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
110529398 (capn3b)
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C2: calpain family
110529398 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
CAPN13-like_C_EFh
EF-hand_5
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
110529398
NCBI-ProteinID:
XP_036840682
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All DBs
Position
8:complement(12374861..12412260)
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AA seq
770 aa
AA seq
DB search
MALVEETSVKVALETEASPDVPEGKTDYPFTASNSIYTAILSRNEAVKDAKRLKNFLELR
DKYVHKKVLFEDPLFPPNDSSLWYSSKFPIEFEWKRPTEICDNPQFIIDGASRTDICQGE
LGDCWLLAAIACLTLNDKLLYRVIPSDQSFTENYAGIFHFQFWRYGEWVDVVVDDRIPTS
NNQLVFTKSFRKNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTEFFEMSEAP
KELYKIMKKALERGSLMGCSIDALLPSHCETETANGLVRGHAYSITALEECDKLKVTKDT
KIRLVQMRNPWGMVLWKGPWNAKSKEWSTISSSDKARLKKKTVETSETWISFEDFKKNFT
KLEICNLTPDTLLDDRSHSWTVAVNEGRWVRGSSAGGCRNFPDTFWTNPQYRMRLYEEDD
DPDDPEHVACTVMVALMQKGRRKDRSKGAKLYTIGFTIYEVPKEMIGSQQHLQKDFFLYN
ASKAKCKSYINLREVSERFCLPPGEYVIIPSTFDPHEEGEFILRVFSEKNSTSEETENTI
RSDHIEQGKHRTKKGKPIVFVSDRAKANKEIEQDDIEVQKEKKEKVKPKPQQPDEESGEH
KMFRAIYQQIAGEDMQICANELKVVMKRVLEKHNDMKTDGFSLESCRSMIALMDTDGTGK
LNLQEFKHLWSKIKAWQLIFKKYDKDKSSTISSFEMRNAVNDAGFRLNNQLYDIITMRYA
DEHLNIDFDSFICCFVRLEGMFRTFHAFDKNGDGTIKLNVLEWLQLTMYA
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcccttgttgaggaaacttcagtgaaggtggcgttggaaactgaagcatcacctgat
gtacctgagggtaagactgactaccccttcacggccagcaacagtatctatactgccatt
ttgagcagaaacgaggccgtcaaagatgccaagcgcctgaagaacttcttggagttgcga
gacaaatacgtacacaagaaagtcctgtttgaagaccctctgttcccacccaatgattcc
tctctttggtacagcagcaaatttcccattgaatttgagtggaagcgcccaacggaaatc
tgtgacaacccccagttcatcatagacggagctagtaggacagacatctgtcaaggagag
ctgggtgactgctggctgcttgctgctattgcctgtctgacactgaatgacaagctgctg
tacagagttatcccatcagaccagagtttcacagagaactacgctggtatcttccatttc
cagttctggcgttatggcgaatgggtggacgtcgtggtggacgaccgtatccccacctcc
aataaccagctggtgttcaccaagtccttcaggaagaacgagttctggagcgctctgctg
gagaaggcttacgccaagttgcacggttcctacgaggccctgaaaggtggcaacactctg
gaggccatggaggacttcactgggggcgtgacagagttctttgagatgtccgaggctcca
aaagaactctacaagatcatgaagaaagccctggagagaggctctctgatgggctgttcc
atagacgccttgctgccgagtcactgcgagactgaaactgcgaatggactggtcagaggc
cacgcctactctatcactgcactagaggagtgtgacaagcttaaggttaccaaggatacc
aagattcgcctagttcaaatgcggaacccctggggaatggtgctatggaaagggccgtgg
aatgccaagtccaaagaatggtccaccatctccagctcagacaaggccaggctgaagaag
aagacggttgagacgagcgagacttggatatcctttgaggacttcaaaaagaacttcacc
aagctggagatctgtaacctgacccctgacacacttctggacgacaggtcccatagctgg
acggtggcggtcaacgagggccgctgggtacgaggcagctccgccgggggctgcaggaac
ttcccagacacgttctggaccaacccgcagtaccgcatgcgtctgtatgaggaggacgac
gaccccgacgaccccgagcatgtggcgtgcaccgtcatggtggccctgatgcagaagggc
cggaggaaagaccgcagcaagggtgccaagctttacaccatcggattcaccatctacgag
gtgcccaaagagatgattgggagccagcagcacctgcagaaagacttcttcctttacaat
gcctccaaggccaaatgcaagtcctacatcaacctgcgtgaggtgagcgagcgattctgc
ctgccccctggggagtacgtgatcatcccttcgacctttgacccccacgaggagggagag
tttatcctcagagtcttctccgagaagaacagcacctcagaggaaaccgaaaatacaatt
aggtcagaccatatagagcaaggcaaacacaggacaaagaaaggaaagcccatcgtgttt
gtatcagacagagcgaaggccaacaaggagattgagcaagatgacatcgaggttcagaag
gagaagaaagagaaagtcaagccaaaaccacagcaaccggatgaggagagcggagaacac
aaaatgttcagggccatttaccagcagattgctggggaggacatgcagatctgtgccaac
gagctcaaggtggtcatgaaaagggtactggaaaaacataatgacatgaagacggacggc
ttcagcttagagagttgccggagcatgatcgctttgatggatacggacggcacaggaaaa
ctgaacctgcaggagttcaaacacctgtggagtaagatcaaagcctggcagctgatcttc
aagaagtatgacaaggacaaatcaagcaccatcagcagctttgagatgaggaacgcagtc
aatgacgcagggttccgcttaaacaaccagctgtatgacatcatcacgatgcgctacgct
gatgagcacctcaacatcgactttgacagcttcatctgctgcttcgtcaggctagaaggc
atgttcaggacgttccatgcctttgacaaaaacggagacggcacaatcaagctcaacgtc
ctcgagtggctccagttgaccatgtatgcttag
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