Oncorhynchus mykiss (rainbow trout): 110529505
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Entry
110529505 CDS
T07259
Name
(RefSeq) CASP8-associated protein 2
KO
K25593
CASP8-associated protein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110529505
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
110529505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding_7
Myb_DNA-binding
YabA
MscS_porin
Endotoxin_C
INO80F
Motif
Other DBs
NCBI-GeneID:
110529505
NCBI-ProteinID:
XP_021467424
Ensembl:
ENSOMYG00000033939
LinkDB
All DBs
Position
8:16893102..16921697
Genome browser
AA seq
2043 aa
AA seq
DB search
MEGDLMDEVYGDLSQDNCNTVAAIDDDSMDIYSGLASPRIYPNAERNCTFLSPQNLSSMD
LYEEIITEEQQDKDSSYNELRTRYNAAQSQIEELLRRLQQIETKNTTLNTENSRLKKNIC
ALIKTAKMEVVRKDKEINRLSQSFRPERGPAAHHQSQMNCLKNQGPMRLNPMGPYQPEVP
TRLNPTGPYQPEVPTRLNHTGPYQPEVPTKLNPTGPYQPEVPTRLNHTGPPPPTQLPGSK
GCVVKDLHQLHCQDRDVVLPQPPSDARNFRPPLPVTSRGDSEASVKDTYSSVSSSSKDSV
KRHHTRELGLSDKPKQTKHREGRGESPRLSESKEQRHKNSPDVNKESHSDERNRSHRAQK
DIGKYDSKSNKSRYPHPSDVEVHRRSDKSKSPHSDILHCTASSYRTSKGLSKDSADILST
GSSRHDKVLSFDKDDDKRSRSIKDISSKNRMHAYSNQASLTKRSSEYFNRKGGTSPPRDH
RRKKERKREDEIRKEKNKSGERKSSCTERGKEREEKRTKEHNRCSADVSKDKNMVNGKVR
EQKTHEESEVLPPEAKVAEKSSKEENGPNRKLSFMETLNLTLSPVKTPRQSAEVKEQEEG
TPPDEVPEDQSAEDSGQTHLGELLVVDKIHSSVVDTHEVFENPVIQPSSEISKPPQPESM
ESRHTERESCQDAEKPLSEAKERHKCQLEVEDSTVQDGSEGRPELPDAMEGQRTKPTTPE
PLRKDFVSAPDCDIVLKTPLESRLEKCDSERKTGTSKDLTAAAVSATTTSVTENCGNNSN
TDTGLSANGLTPEHSTGDSLVIITDKSNSETPSALVCKSQAVETVTQDPPAVCVGHPAVE
GSPGKQSESLKCTPFVQPKGLQQMPASIITNSSLEKNGTEVQDVSKDAVSSTISMEVDIG
ITSEVITDVTEIPVECEKEKTLVEQSSPLSSIGVSKVSSTTGEVAPSEQYNCGLAETPKK
YLNSEPSYTENEEENVEPSSSIPMAHDEDSMMLTLSNLKVIPHAISPLTSPVRLKTKSQQ
LPCHSKPAYFKSLCKDFPSATGDSNSKKLEVNQENNNPGCSVTHAAQRDVDETSVHPSSL
EELEEGEIVSESEEEETPVMPSSPPMTVRPTRTNKNQPTLKSSPRLSKKPAKENSLVSQQ
NFKLGSKTLTSPFGSPTSNKTRYRTVQPPLPNAALSTVEEVMAMLAKIRYECRKKYMKLH
STFPKKTFCGVMDMSFFPSFTDFVDSVSFTKLCSQEDYLKVKLKNIIISVLSKLSNNGIV
NRIFDQEPLNMKLKLWEFVDVQLDFLFKEIQTALRSVCKSSNGSQSAGAEKRDSLSGKGV
PKLPVKSPKPSVATELKMQQGVTITRTSAPKRLQKEFTECVETSMKRTRSRTVPPCKTGL
GRGKNIKMSFEEDMESVPQTSDPPVIQPPLQNVVEILPSNSSSSAEKTATYVRRLSQNVS
LHDKPDFEILTEQQASSLTFNLVTDSQMGEIFKCLLQGSDLLETSVSAGDNHGWSLGTPL
KERERFLGVGTPSKVGTPSKLIATWSAISPIKFSSPNSKVQIPLNPSLLDESCMLEVPSG
LPEIRRTPQSSVFSHRSYSILAEDLSGSLTIPSPLKSDNHLSFLHPASGEPMSAPDSVIS
AHFSEDALMDGEDATEQDIHLALDTDNSSGASSGGGRTREAPVNPLFHFKPHLPMQAVVM
EKSNDHFIVRIRHANTNSTNSGVNSSSPGSVNSTYQGNNSSSPGSVNSTYQGNNFSSPGS
VNSTSLGINSSSLVVNSLSPDINSTKQVVNYINLGINSSQEVNSSSPGSVNSTYPGNNAT
NPENNCAYPCVNFTSPEVISTNPGISPTSAEINPGGAESPQTPPGQEKHGKDEDQPPEKT
PSKSPFSEAIPPFYLSSLSTSTETASALSSPCLTIIEDTPERDHSKGKTGKKRTKHHVET
KAKRAKREVIPERSMHKKKSSKSPKGKGTGSSKRERSEVITPPQSTPSPNSLSAKNIIVK
KGEVMVTWTRDEDRDILLALKMKGSSPDTFSALSEKLNKTPAQIAKRFSQLMKLFKKKEK
MAN
NT seq
6132 nt
NT seq
+upstream
nt +downstream
nt
atggagggggatttgatggacgaagtgtatggtgatctcagtcaagacaactgcaatacg
gtggcagcaatcgatgatgattctatggatatttattctggtttggcaagtccaaggatt
tatccaaatgcagaaagaaactgcacattcctctcaccacagaatctgagctctatggat
ttatatgaagaaatcataacggaggaacaacaggataaagactcttcctacaatgagttg
aggacaagatacaatgctgcacaaagccaaattgaagagttacttaggcggttgcagcag
attgaaacaaagaatacaacgctgaacactgagaacagccgtctgaagaagaacatctgt
gcgctcatcaaaacagctaaaatggaggttgtgcggaaggacaaggagataaataggttg
agccaaagtttcaggccagagagaggtcctgctgctcaccatcaatctcagatgaactgc
ttgaaaaatcaaggtccaatgagactgaatcctatggggccttatcaaccagaagttcca
accagactgaatcctacagggccttatcaaccagaagttccaaccagactgaatcatacg
gggccttatcaaccagaagttccaaccaaactgaatcctacggggccttatcaaccagaa
gttccaaccagactgaatcatacgggtccacctccaccaactcaactaccaggatctaag
ggttgtgttgtaaaggatcttcatcagctgcactgtcaagacagagatgtggtcctcccc
caacccccatctgacgcaagaaatttcagaccacctcttcctgtcacctctagaggcgat
tcagaagcttcagtgaaagacacatattcttctgttagcagttccagtaaggactccgtg
aaaagacaccatacacgtgaactaggcctgtcagacaagccaaaacaaaccaagcacaga
gaaggcagaggtgaaagtcccaggctgtctgagtcgaaggagcagcgacataaaaacagt
ccagatgtaaataaggaatctcattcagatgagaggaaccggtcacacagagcacaaaaa
gatattggaaaatatgattctaagtcaaacaaaagcagataccctcatccctcagatgtt
gaggtacacaggagatcagataagtctaaaagcccacactcagacattttgcattgcact
gcttcctcttaccgtacgtctaaaggattgtctaaagacagtgcagacattctatcaaca
gggtctagtcgacatgataaggtgcttagctttgataaggatgacgataagcgtagtaga
agtattaaagacatttcctctaaaaacagaatgcatgcctattcaaatcaagccagtctc
actaaacgatccagtgaatattttaatcgcaagggagggacaagtcctccaagggaccat
cgaaggaaaaaagagagaaaaagagaggatgagatcagaaaagagaaaaacaagtcagga
gaaagaaaaagcagttgtacagagagaggaaaggagcgcgaggaaaaaagaacaaaggaa
cataaccgatgcagtgcggacgtcagtaaggacaagaacatggtcaatggtaaagtcagg
gagcaaaagacacatgaggaatcggaagtgcttccacctgaggccaaagtggctgagaaa
agctctaaagaggaaaacggtcccaacagaaagttaagtttcatggaaactctgaacctc
accctgtcaccagttaaaacaccaagacagtctgctgaagtcaaggaacaggaggagggc
acaccacctgatgaggtgcctgaagatcagtcagcagaagacagtggacaaactcatctt
ggagaattgcttgtagtagacaaaatccacagtagtgtagtagacacccatgaggtcttt
gagaaccctgttatacagccctcttcagaaatctcaaagcctccacaacctgaaagtatg
gagagtagacatacagagagagaatcttgtcaggatgctgaaaagcctctgtctgaagcc
aaagagcgacataagtgccagttagaagtagaagacagtactgtccaagatggctccgaa
ggaagacctgagctgcccgatgccatggagggtcagaggactaaacccaccacaccagaa
cctctcaggaaggattttgtttcagctccagactgtgacattgttttgaaaactccactg
gagagcagacttgaaaaatgtgactcagaaagaaaaactggcacgtctaaggatttgact
gctgctgctgtctctgcgactactacttctgtcactgagaattgtggaaacaattcaaat
accgacactggcctatctgctaatggacttacccctgaacattcaactggagactcactg
gttattattactgacaagtccaacagtgaaactcccagtgctttggtctgtaaaagccaa
gctgttgaaactgtgacacaagatccacctgctgtctgtgtgggacatcctgctgttgaa
ggtagtccaggaaaacaatcagaatctctgaaatgtacaccttttgtccaacctaagggc
cttcaacaaatgcctgcttccattattactaattctagtctggagaaaaatgggacagag
gtgcaagatgtttccaaggatgctgtgtccagtacgattagcatggaggtagatatcggc
atcacgtctgaggtcattactgatgttacagaaatccctgtggagtgtgagaaggagaaa
actcttgtggaacaaagttcaccattgagcagtattggggtgtctaaggtgagtagcacc
acaggagaagttgcaccatctgaacagtacaactgtggtttggcagagacaccaaagaag
tacctaaattctgagccaagctacacagagaatgaagaggagaatgttgagccctccagc
tccattccgatggcccatgatgaggactcgatgatgctcacactgagtaatctaaaagtc
attccacatgccataagcccactcacaagcccagtccgcctgaagacgaaaagccagcag
ctgccatgtcacagcaaacctgcttacttcaagagtctttgcaaagattttcccagtgct
actggagattccaattcaaagaagttggaagtgaatcaggagaacaacaatcctggctgc
tctgtcacacatgctgcacaacgagatgtggatgagacatctgtccatccttccagcctt
gaggaactggaagagggtgaaattgttagtgaaagtgaagaggaagaaactccagtcatg
ccaagttctccacccatgacggttcggcccacaagaacgaataaaaatcaaccaactctc
aagtcatcccctagactttcaaagaagccggccaaagaaaatagtttagtttcacaacag
aattttaaactcggaagtaaaaccttgacttcaccatttggaagccccacatcaaacaaa
acccgctacagaactgttcaacctcctttacccaatgctgccttgtctaccgtggaggag
gttatggccatgcttgcaaagattcgctatgagtgcagaaaaaagtacatgaagcttcat
tcaacattccctaagaaaaccttctgcggtgttatggacatgtccttttttccctctttt
acagactttgttgatagtgtaagctttactaaactatgcagccaagaagattacctcaaa
gttaaactgaagaacatcatcatttctgttttgagtaagttatcaaataatggcattgtc
aaccgcatctttgaccaagaaccacttaatatgaagttgaaactgtgggaattcgtggat
gtgcagttagacttcttattcaaggagattcaaactgcactgagaagtgtttgcaaatcc
tcaaacggaagccagtcggcaggagcagaaaaaagagacagtctctctggaaagggtgta
cccaagctgcctgtgaagtcccccaagccatctgtggccactgaacttaaaatgcagcag
ggagtgaccataaccagaacttctgcaccaaaaagactgcaaaaggaattcactgagtgt
gttgaaaccagcatgaaaagaaccaggtctcggactgtccccccttgcaaaacaggtctt
ggaagaggcaaaaatattaaaatgtccttcgaagaggatatggaatcggtgcctcaaacc
tcagatcctcctgttatccaacctcctttgcaaaacgtggtagagatcttaccatcaaac
agctcttcatctgctgagaaaacagcaacctatgttcgccggctgtctcaaaatgtctca
ctccatgacaagcctgactttgaaatcctcacagaacagcaagcctccagcctaacgttc
aacctggtaacggactctcagatgggagagatcttcaagtgtcttttacaagggtctgat
ctgctagaaacaagtgtttcagctggggacaatcatggctggtcccttggtactcctctg
aaagaaagggagcgtttcctaggcgttggtaccccaagtaaagttggtactccctctaaa
ctcattgccacatggtcagctatttcacctatcaagttttcctctccaaattcaaaagtc
caaattccattaaatccatctttgttggatgagagttgcatgttagaggtgccctccggc
ctaccagaaatcagaaggacaccacagtccagtgtgttctcgcatagatcatattccata
ttggcagaagatctgtctgggtctctcacaattccctcacctctcaagtctgacaatcac
ctcagctttttgcacccagccagcggcgagcccatgtctgctccggacagtgtcatcagt
gcacacttcagtgaggatgctcttatggatggggaagacgctacagagcaggacattcac
cttgccctggacacggacaactccagcggtgcatcaagcggtggtggcaggaccagggag
gctcctgttaaccccttgtttcacttcaagcctcacttgcccatgcaggcagtagtgatg
gagaagtcaaatgatcatttcattgtgaggatacggcatgcaaacaccaactccaccaac
tcgggggtcaactcctcaagcccaggcagtgtcaactctacctaccaaggaaataactcc
tcaagcccaggcagcgtcaactctacctaccaaggaaataacttctcaagcccaggcagt
gtcaactccacaagcttaggaattaattcatcaagcctagtagtgaattctttaagccca
gacatcaattccaccaaacaagtggtcaactacatcaacctaggaatcaactcaagccaa
gaagtcaactcttcaagcccaggcagtgtcaactctacctacccaggaaataatgccacc
aacccagaaaataactgtgcctacccatgtgtcaacttcacaagcccagaagtaatttct
accaacccaggcatcagccccacaagtgcagaaatcaatcctgggggtgctgagagccct
caaacaccaccaggacaagaaaaacatggtaaagacgaagatcagcccccagaaaaaact
ccttcaaaatcccctttttcagaggccattcctcctttctacctttccagcctttccaca
agcaccgaaacagcatctgcgctatcttcgccatgcctcaccatcatagaagacacacca
gagagagaccacagcaagggtaagaccgggaaaaagcgcacaaagcaccatgtggaaact
aaagcaaagcgggctaaaagggaggtgatcccagagaggagcatgcataaaaagaagtcc
tcaaaaagtcccaaaggaaaggggactggaagctccaagagggagagaagtgaagtcatt
actccaccccaatctaccccatcacccaacagcctgtctgccaagaatatcatagtaaaa
aagggtgaagtgatggtgacgtggacaagggatgaagaccgagatattctcctcgcactg
aagatgaaaggttcctctccagatactttctctgccctttcagagaaattgaacaagaca
cccgctcagattgcaaagcgattttcccaactgatgaagctttttaagaagaaggagaag
atggcaaactga
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