Oncorhynchus mykiss (rainbow trout): 110529727
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Entry
110529727 CDS
T07259
Symbol
brf1b
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit b isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110529727 (brf1b)
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
110529727 (brf1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
110529727
NCBI-ProteinID:
XP_021467870
Ensembl:
ENSOMYG00000013924
UniProt:
A0A8C7Q031
LinkDB
All DBs
Position
8:complement(27824150..27951450)
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AA seq
705 aa
AA seq
DB search
MTSRICKNCGCSEIDLDQARGNAVCTNCGSVLEDNIIVSEVQFVEGSGGISSAVGQFVSA
DGPVKAPVLGTGFHTSLGKESRAQTLQNGKRQIHNLGSQLQLNQHCLDTAFNFFKMVVSK
HLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINSPA
IDPCLYIPRFAHMLEFGEKTHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
EFRRTVKDVIGVVKVCEATLRKRLTEFEDTPTSQLTIDEFMRVDLEQECDPPSFTAGQRK
VKMQALEQELAKKLDEVQGEISLYRDEIETELENSRPKLRGIYAAYAKEIDPLDEVLSQA
SCSSPREVDPEEDEELEAVAQHLNQDFLCQVIQGEQQGDERGEEGVTEEAPPPHPPPRGG
PSLASILGPLPSAASLGLSESIHECIAEDKDSDGKSESGELDLDGIDDNEIERYILNDKE
VRVKTALWMKQNEEYLREQKEKEERITKEKEQGTYKEKPKKTSKKREPIRASTAGEAIEK
MLEQKKISSKINYDVLRDLNSKGGSGNSSPAQPTSTEEPPSGPPGRKRLTRRKKQPNKTN
MGLATTIMGKRLRPLISSATKKKRAASQVTPNLTPAATAVLPNLSSPPTPNSAPPGPTMV
ESGPVAYDEVAEDDEEEEVEEPCVSALQLLGGNEYGCEAEEEEIF
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccgcatatgcaagaactgtggttgttccgagatcgacctcgatcaggctcgg
ggcaatgcagtatgcacgaactgtgggtctgtgctggaggacaacatcatcgtgtccgag
gtgcaattcgtggagggcagtggtgggatttcgtcagctgtggggcaattcgtctcagca
gatggtccagtgaaagccccagtcctgggtactgggttccacaccagccttggaaaagag
tcccgtgctcagacgctgcagaacggaaagcggcagatccacaacctgggcagccagctg
cagctcaaccagcactgcttggacacggccttcaacttctttaagatggtggtgagcaag
cacctgacgcgcggacgcaagatggcgcacgtcattgccgcctgcctctacttggtctgc
cggactgagggcacgccccacatgcttctggacctgagtgatctcctacaggtgaacgtg
tacatcctagggaagaccttcctcctgctggctcgagagctctgcatcaactccccagca
atagacccttgcctgtacatccctcgtttcgcccacatgctggaatttggggagaagacc
catgaggtgtccatgactgcactgcgcctactacagaggatgaagagggactggatgcac
acgggacgcaggccctctgggctgtgtggggcagcgctgctggtggctgcccggatgcac
gagttccgccgcaccgtcaaggacgtgatcggagtggtgaaagtgtgcgaggccacactg
aggaaaagattgacagagttcgaggacactcccaccagtcagctgaccatcgatgagttc
atgcgggtggatctggagcaggagtgtgacccaccctctttcactgctggacagaggaag
gtcaagatgcaggcgcttgaacaagagttagccaaaaagctggatgaagttcaaggtgaa
atcagtttgtatcgagacgagatcgagacggagctggaaaacagcaggccaaagctcaga
gggatctacgctgcctatgccaaagaaatagacccgctggacgaggtgctttctcaggcc
tcgtgctccagccccagggaggtggaccccgaggaggacgaggagctggaggcagtcgcc
caacacctgaaccaggacttcctctgccaggtcatccagggggaacagcaaggggacgaa
agaggggaagaaggagtgacagaggaggcaccccctccacatccaccacccagaggaggg
ccctccctagcttccatcctgggtcccttgcctagcgcggctagcctggggctcagtgag
tccatccatgagtgcattgcagaggacaaggacagtgatggcaagtcggagagcggggaa
ttggacctggacggcatcgacgataatgaaattgagaggtatatcctcaacgacaaagaa
gtgagagttaagacggctctgtggatgaagcagaatgaggaatatctgagggagcagaaa
gaaaaggaggagaggataactaaagagaaagagcaagggacctacaaggaaaagcccaag
aaaacgtccaagaagcgggagcccatccgtgccagtacggcgggcgaggccatcgagaag
atgctggagcagaagaagatctccagcaagatcaactacgacgtgctgcgtgaccttaac
agcaagggtggcagcggcaacagcagccctgcccagccaacctccacggaagagccacct
agtggcccccctgggcggaagaggctgacccgccgcaagaagcagcccaacaagaccaat
atgggcctggccaccaccatcatgggcaagagactccgtccacttatatcctctgcaacc
aagaagaagagagccgcttcacaggtgacccctaacctgaccccggctgcaaccgctgtt
ctgcccaacttgtccagcccgcctacccccaactcggcccctccaggacccactatggtg
gagagtggcccggtggcctatgacgaagtggcagaggatgatgaggaggaagaagtggag
gagccctgtgtcagtgcgttgcagctcctgggaggaaacgagtacggctgtgaggctgaa
gaggaagagattttctag
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integrated database retrieval system
