Oncorhynchus mykiss (rainbow trout): 110529758
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Entry
110529758 CDS
T07259
Name
(RefSeq) neurexin-3b isoform X1
KO
K07377
neurexin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110529758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110529758
Membrane trafficking [BR:
omy04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
110529758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
110529758
NCBI-ProteinID:
XP_021467924
Ensembl:
ENSOMYG00000016153
LinkDB
All DBs
Position
8:29340904..29867575
Genome browser
AA seq
1719 aa
AA seq
DB search
MHPFSLSQRVLLLLSTLLGLCQGLEFTGSEGQWARYVRWDASTRSELTFQFKTAASDALI
LYFDDGGYCDFLLLTVTDGKLQLCFSVDCAETTVTSEKSVNDSRWHFATVSRHNLRTVLA
LDGQTKADEVRPQRQFMKIVSDLFLGGVPGDIRTSAITLPTVRELPPFKGVITDLNYGNK
VPTLINSQKVRLEMMGLCTENPCENGGHCSMADGEPYCDCSKTGYTGRTCGEAAVQRKPG
LAHLKASESGRNKAREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLLLHT
GKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNGWHDIKVTRNLRQQSGMGH
AMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYK
NNDIRLELSRLARIVDPKMKLQGDVVFKCENVATLDPINFESPDSYLSLPKWNTKRMGSI
SFDFRTSEPNGLILFTHGKAQDRRDAAGKKNYKVDFFAVELLDGGLYLLLDMGSGTIKVK
ATQNKVNDGAWHHVDIQRDGRSGIISVDNRRTPFTASGENEILDLEGDLYLGGLPDNRVG
LVLPTELWTAMLNYGYVGCIRDLFIDGRSKNIRAISESQNTTGIRPTCSKVTGKQCDSNP
CKNNGVCKEGWNRFICDCTGTGFWAGTCEREASILSYDGSMYMKVVMPSVMHTEAEDVSL
RFKSQHAFGLLMATNSRDSADTLRLELDSGRVKLTINLDCVRINCNTSKGPEILYAGQKL
NNYDWHSVRVVRRGKNFKLTVDEDMAEGQMAGDHTRLEFHNVETGILTERRFVSSSPPPF
VGHLQGLKFNGMFYIDMCKNGDIDFCELNARFGMRFIIADPVTFKSKGSYLGLATLQAYT
TMHLFFQFKTTSPDGFILFNSGDGNDFIAVELVKGFVHYVFDLGNGPSLLKGNSDSALND
NLWHNVVITRDATNTHTLKVDAKSVTQNVNGAKNLDLKGDLFVAGLGPNMYQNLPKLVVS
REGFQGCLASVDLNGRLPDLINDALFRSGQIERGCEVGFTKADLQGPSTTCQEDSCANMG
VCIQQWENFTCDCTMTSYTGTQCNDPGTTYIFGKGGGLITYTWPNNERPSTRTDRLAVGF
STTIKDGILVRIDSAPRLGDYIMLHITEGKVGVTFNIGTSDISVKEVTMTINDGKYHLVR
FTRNGGNATLQVDNWPINEHFPTGPSDVERYQMANKKIPFNYKRPVEDWLQEKGRQLTIF
NTQATISIGGNDRKRPYQGQLSGLYYNGLKVLNMAAEGHANIKVNGSVRLVGDVPTSRGA
ARTTTSVPPEMSTTFIETTTTLSTTTTRKQRSPPTIQQTTDDIVSSAECSSDDEDLEECD
SGHAGGELVIPVLVEDPIDIPPVSTHSPFIPLPPTLRPVLTIIEATKESLPMATEAGVPC
LSDRGSDDCDDGLDGGGGGDDDDDDDDAMVISGFGSGEAFDSSLPPTDDEDFYTTFSLVT
DKILTTSAYEGGYKALAPKWEAKDLRPSKASEAGRTTPTPPLPNLGGTVAEASLPSDGTP
PKLPAGKMDNREVIKPLQPDIVLLPLPTTSFDLDGTKPRGPLITSPMLRTVPATLPTVPV
VRRVPPGASEVIRESSSTTGMVVGIVSAAALCILILLYAMYKYRNRDEGSYQVDETRNYI
SNSAQTNGAVVKDKTPSGGSGAKGASSKRPKDKDKEYYV
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgcatccctttagtctctcccagcgtgttctcctgctgctcagtactctgctgggcctg
tgccagggtctggagttcacaggctccgagggtcagtgggctcggtatgtccgctgggac
gccagcaccagaagtgagctcaccttccagttcaagacagccgcgtccgatgccctgatc
ctctactttgacgatggcggctactgcgacttcctgctcctcactgtcacggacgggaag
ctccagctctgcttcagtgtcgactgcgccgagaccaccgtcacctctgagaaatcggtc
aacgatagccgctggcatttcgctacagtcagccgacacaacctcagaacggtcctagcc
ctggacgggcagaccaaggcggacgaggttcgaccacagcgccagttcatgaagatcgtc
agcgacctcttcctcggaggtgtacccggagacatcaggacttcggccatcaccctgccg
acggttagagagctgccaccgttcaaaggagttatcacagacctgaattacggaaacaag
gttcccacgctgatcaacagtcagaaggtgcgtctggagatgatgggtctctgtacagag
aacccgtgtgagaacggaggccactgctccatggctgatggagaaccctactgtgactgc
tccaaaactggatataccggacggacctgcggtgaagcagccgttcagaggaaaccaggc
ttagcacatctgaaggcatctgagtcaggtagaaacaaagcgagggaagagaacgtggcg
acgttccgtggttcggagtacttctgctacgacctgtcccagaaccccatccagtcctcc
agcgatgagatcacattgtccttcaagacgtggcagaggaacggtctcttactccacacg
gggaagtcggctgactacgtcaacctggccctaaaggacggagcggtgagcctggtcatc
aacctgggctcgggcgccttcgaggccatcgtggagcccgtcaacgggaagttcaacgac
aacggctggcacgacatcaaggtcacacgcaacctcagacagcaatcaggcatgggacac
gctatggtgactatctccgtggatgggatcctcaccacgacagggtatacccaggaagac
tacaccatgctggggtctgatgacttcttctacgtgggtgggagtcctagtacggctgat
ctacctggttctcccgtcagcaacaacttcatgggctgcctgaaagaggtggtctacaag
aataatgacatccgtctagagctctcccgtctggcccgcatcgtagaccccaagatgaag
ctccagggtgacgtggtgtttaagtgtgagaacgtggccaccctggaccctatcaacttc
gagagccccgactcctacctcagcctccccaagtggaacaccaagagaatgggttctatc
tcctttgacttcaggacctcagagcccaacggactcatcctgttcacccacggcaaggcc
caggaccggcgggacgcagcagggaagaagaactacaaagtagacttctttgctgtagag
ctgctggatggaggactgtacctgctgctggacatgggctcaggcactatcaaggtcaaa
gccacccagaacaaggtcaatgatggagcctggcaccacgtggacattcagagagatgga
cgttcaggcatcatctcagtggacaaccgtcgtactccgttcacggccagcggagagaac
gagatcttagacctggagggagacctctacctgggtggtctccctgacaaccgcgtaggc
ctggtgttacctaccgaactgtggacggccatgttgaactacggctatgtgggctgcatc
cgggacctcttcatcgacggacgctccaaaaacattcgggccatctccgagtcccagaac
accaccggcatcaggcccacctgcagtaaagtcacggggaaacagtgtgatagcaatccc
tgtaagaacaacggcgtctgtaaggaagggtggaaccggtttatctgcgactgcaccggg
actgggttctgggccggcacgtgtgagagagaggcgtccatcctgagctacgacggcagc
atgtatatgaaagtggtgatgccaagcgtgatgcacactgaggcagaggacgtctccctc
cgcttcaagtcccagcatgcattcgggctcctaatggccactaactctcgggactccgct
gacacactccgtctcgagctggacagcggccgcgtcaaactcacgatcaacctagactgt
gtcaggataaactgtaacaccagcaagggaccagagattctatatgcgggacaaaagctc
aataattatgactggcactccgtcagagttgtccgacgcggtaaaaacttcaaactgaca
gtcgacgaagacatggctgaaggccagatggcaggtgaccacactcggctggagttccac
aatgtggagacagggattctgacagagagacgtttcgtctcctcttctcccccacccttc
gttggacacctgcagggcctgaagttcaacggcatgttctacattgacatgtgtaagaac
ggcgacatcgacttctgcgagctcaacgcccgcttcggcatgcgcttcatcatcgccgac
ccggtgaccttcaagtccaagggcagctacctgggcctggccaccttgcaggcctacacc
accatgcacctgttcttccagtttaaaaccacctccccggacggattcatactgttcaac
agcggcgacggaaacgactttatcgctgttgagctggtcaaagggtttgtccactatgtg
tttgacctggggaacggtcccagtctgttgaaggggaacagtgacagtgcactgaatgac
aacctgtggcacaacgtagttatcaccagggacgccaccaacacacacaccctcaaggtg
gacgccaagtccgtcacgcagaacgtcaacggagccaagaacctcgacctcaaaggggat
ctgtttgtggcagggctggggcctaacatgtaccagaaccttcctaaactggtggtctct
agggaaggtttccagggttgtctggcgtctgtagatctgaacggccgcctgcctgacctc
atcaacgacgccctgttccgttccggacagatcgaacgcggctgtgaagttggtttcacc
aaagccgacctgcaaggacccagcactacctgtcaggaggactcctgtgccaacatgggc
gtttgtattcagcagtgggagaacttcacctgcgactgcaccatgacatcttacacaggg
acgcagtgcaacgaccctggtaccacctatatcttcggtaagggcgggggtctgatcacg
tacacgtggcctaacaacgagaggcccagcacgcgtaccgaccgcctggctgtaggcttc
agcaccaccatcaaggacggcatcctggtccgcatcgacagcgcgccgcgactcggtgac
tacatcatgctacacatcacggaaggcaaggtgggcgtgaccttcaacattggtacgtca
gacatcagtgtgaaggaggtaaccatgacgatcaacgacgggaagtaccacctggtgcgc
ttcaccaggaatgggggcaacgccactctgcaggtggacaactggccaatcaacgaacac
ttccccacaggaccgagcgatgttgagcgctatcaaatggctaataagaaaatcccattc
aattataagaggccggtagaagattggctacaggagaaaggccggcagctcaccatcttc
aacacccaggctaccatctctataggcggtaatgaccgtaaacgtccctaccagggacag
ctgtccggtctctactacaacggcctcaaggtcctcaacatggctgccgaaggccacgcc
aacatcaaggtgaacgggagcgtgcgattggtgggggatgtacccaccagtaggggcgct
gcccgcaccaccacctccgtgccacctgagatgtccaccaccttcatagagaccaccacc
actctgtctacgaccaccacgaggaaacagcgctctccacccaccattcagcagacgaca
gatgacatagtatcgtcggcggagtgttccagcgacgacgaggatctggaggagtgtgat
tccggacacgcaggaggggagttagtcatccccgtacttgtagaggatcccatagacatc
cctcctgtctccacccattctcctttcatccccctccccccaaccctccgccccgtcctc
accattatcgaggccaccaaagagtccctgcccatggccactgaggcgggggtaccttgc
ttgtcggaccgaggcagcgatgattgtgatgatggtcttgatggtggtggtggtggggat
gatgatgatgatgatgatgatgcaatggtgatatcggggtttggctctggcgaagctttc
gactctagcctgccccccactgacgatgaagatttttacaccaccttctccctggtaaca
gataagatcttgaccacgtcggcctatgaaggtggctacaaagctctcgcgcccaagtgg
gaagccaaggacttgaggcctagcaaagcctcagaggcgggtaggactacacccaccccg
cctctacccaacctcgggggcactgtagcggaggcatccctcccctcggacggcacgccg
cccaaactgcccgccgggaaaatggacaaccgcgaggtgatcaaacccctacagccagac
attgtcctgctgcctctgccgaccacgtccttcgacctggacggcaccaagccccgcggg
cctctcatcacctcgcccatgctacgcacggtgcctgccacgttacccaccgtacccgtc
gtaaggcgggtaccccctggggcctcggaggtgatacgagaatcaagcagcacaacaggc
atggtggtgggcatcgtctcggccgcagcactctgcatcctcatcctcctctacgccatg
tacaagtacaggaacagagacgaaggctcctaccaggtagacgagacacggaattacatc
agcaactcggcacagaccaacggtgccgtggtgaaagataaaacgcccagcgggggcagt
ggtgccaagggagccagcagcaagagaccgaaagacaaggacaaggaatactatgtatag
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integrated database retrieval system