Oncorhynchus mykiss (rainbow trout): 110529768
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Entry
110529768 CDS
T07259
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110529768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110529768
Spliceosome [BR:
omy03041
]
Complex A
U1 snRNP components
U1 related factors
110529768
Complex B
110529768
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
110529768
NCBI-ProteinID:
XP_021467955
Ensembl:
ENSOMYG00000026221
LinkDB
All DBs
Position
8:30227409..30243300
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AA seq
872 aa
AA seq
DB search
MSFPPHLNRTLLPPGIPPPQFAGFPSGTPMIPVHMGIMTQTPAVLVPTSMPAAPRKEAAL
VKAKETDENSGPTTTVFVGNISERASDMLIRQLLAKCGLVLSWKRVQGASGKLQGKNRTA
FGFCEYKEPESTLRALRLLHELQIGVKKLLVKVDAKTKAQLDEFKAKKKSSTNGNGAEVG
KEEEAEEEEVIDEDTKRRDQVVKGAIDGLIREYASELNAASNDESPHRRKKKEKKEEEDI
NAIDGLEDDKRDLISREISKFRDTHKKLEEEKDKKDKERAEFDRERRERDKERERERERR
DREREKEREKERERERERERERERERDRSDRDRDRNRTKEREWERERSRDRSKDRSHSRE
VSRDRDKDKKRDQEDEEEVYERRRLERKLRDKEAAYQERLKNWEIRERKKARDYSKESER
EEERRREMTKESKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKETEVDERDRKREKE
ELEEIRQRLLAEGHPDPEAEIRRMEEEAERLRQPPVKPEPDPEEERVHKAPRVDRDRRGD
RDRDRGDRERERGDRDRGDRERERGERDRGDRERERGERDRERGDRDRERDRGDHHVPHH
HHPHSDDDVEEGEEFDDDQSGSKPCLKPTLRPITAAPSVSSASGGATPNTPCGGDESPCG
IIIPHENSPPHETPPQEEFRPKIGLSLKLGATSSPSQPNVAIKRKKLTVDSVFNKFDDEE
ADEAPRKRKLVPLDYGDDDKNLQSVVDGASGLAAIKGANTEEKRKHIKSLIEKIPTGKTE
LFSYPLDWSAVDSTLMDRRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHGTPQGILDDV
AMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttccctcctcatctcaaccgaacccttctgccaccgggcatcccccctccacag
tttgctggttttccttcaggtaccccaatgataccagtccacatgggtattatgacccaa
acccccgcggtcctggtgcccacctccatgcctgcggcacccaggaaggaggccgccctg
gtgaaggccaaggagacggacgagaacagtggccccaccaccactgtatttgtagggaac
atctcagagagagcctcggacatgctgattcgacagctgctggcgaaatgtggcctggtc
ctaagctggaagagagtccaaggagcctctggaaaacttcaaggtaaaaacagaacagct
tttgggttctgtgagtacaaagagccagagtcaacgctgcgggccctgcggctgctccac
gagctgcagatcggggtgaaaaagctgctggtaaaagtggatgccaagaccaaggcccag
ctggatgagttcaaggccaaaaagaagagcagcaccaacggcaatggggcagaggttgga
aaagaggaggaggcggaggaagaggaggtgatcgacgaggacaccaagaggcgggatcag
gtcgtcaagggtgccattgacggtctgatccgcgagtatgccagcgagctcaatgctgcc
tcgaatgatgagtccccccaccgcaggaagaagaaagagaagaaagaagaggaggatatc
aacgcaattgacggattggaggatgacaagagagacctgatttctagagagatcagtaaa
ttccgcgacacccacaagaaactggaggaggagaaggacaagaaagacaaggagcgtgca
gagtttgatcgcgagcgacgggagagggacaaggagagggaacgtgaaagggagcgccgg
gaccgcgagcgggagaaagagcgcgagaaggagagggagcgtgagagggagcgcgagcgt
gagagggagcgcgagcgggacagaagtgacagagaccgtgatcgtaaccggacgaaggag
agggagtgggaaagggagaggagccgtgacaggagcaaggaccgcagccactccagagag
gtgagtcgcgacagagacaaggacaagaagcgtgaccaagaggatgaggaggaggtctac
gagcggagaaggctggagaggaaactccgagacaaggaggcagcctatcaagagcgtctg
aaaaactgggagatccgcgagaggaagaaggctcgagactactccaaggagtctgagcgg
gaggaagagcgcaggagagaaatgactaaagaaagcaaacggctgaaggagttcctggag
gactacgatgacgacagagatgaccctaagtactacaggggcagcgcactgcagaagcgt
ctgagagaccgggagaaggagactgaggtggatgagcgcgacaggaagagagagaaggaa
gagctggaggagatcagacaaaggctgctggccgagggacacccagaccccgaagccgag
atacgcaggatggaagaggaggcggagcgtctgcgccagcctccagtgaagccagagccc
gaccccgaggaggagcgggtacacaaggccccacgggtggaccgggatcgcagaggagac
agagatcgagaccgaggtgatcgggagagagagagaggtgatcgagaccgaggtgatcgg
gagagagagaggggggaaagagatcgaggtgatcgggagagagagaggggggaaagagac
cgggagagaggggatagagaccgggagagggacagaggggaccaccatgtaccccaccat
caccacccccactctgatgatgatgtggaagaaggggaggagtttgacgacgaccaatcg
gggtccaagccctgcctgaagcccacgttgcggccaatcactgcggccccctctgtttcg
tcggccagcgggggcgccacccccaacacgccttgtggcggggacgagtcaccctgcggc
atcatcatcccacacgagaactcaccccctcacgagaccccaccccaggaggagttccgc
cccaagatcggcctcagtctcaaactgggagccactagcagccccagccagcccaacgtg
gccatcaaacgcaagaagctcactgtggacagcgtctttaacaaatttgacgacgaggag
gcagacgaggctccccgcaagcgcaagctggtaccactggactacggcgacgacgacaag
aacctccagagtgtggtagacggcgcctcgggcctggcggccatcaagggcgccaacaca
gaggagaagcgcaagcacatcaagagcctgatcgagaagatccccacgggcaagacggag
ctgttctcctacccgctggactggtctgcagtggactcgactctgatggatcgacgcata
cgcccctggatcaacaaaaagataattgagtacattggagaagaggaggctacgctagtc
gattttgtctgctccaaggtgatggctcatggtacaccacagggtatcttggatgatgtt
gccatggttttggatgaagaagcagaggtcttcatcgtcaagatgtggcggttgctgatc
tacgaaactgaagccaagaagattgggcttgtgaaataa
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