KEGG   Oncorhynchus mykiss (rainbow trout): 110529851
Entry
110529851         CDS       T07259                                 
Name
(RefSeq) pre-mRNA-processing factor 39
  KO
K13217  pre-mRNA-processing factor 39
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omy03041]
    110529851
Spliceosome [BR:omy03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    110529851
SSDB
Motif
Pfam: HAT_PRP39_N HAT_PRP39_C Suf TPR_14 HAT_Syf1_CNRKL1_N HAT_Syf1_CNRKL1_C TPR_16 TPR_19 Methyltransf_FA
Other DBs
NCBI-GeneID: 110529851
NCBI-ProteinID: XP_021468128
Ensembl: ENSOMYG00000015814
UniProt: A0A8C7VLJ9
LinkDB
Position
8:complement(35306928..35321805)
AA seq 812 aa
MEDTDLHLSDEPMTGMLDTDSPESVESPAMEGNGEDFLPDLPVLTHAAEWTMDQDPHNLT
TVIHDSDSESDQSSPEVIEQHQVQQSDLGSVEQAVQHFQLASAELFQDERREHEDSDEQS
RSPQAEQQNQMEASSDESQDGHNNTATEPLIQSEKLSDAGEQQQDPVQAQPPMVAEDSSP
ANMELEESKETEQVDPVEEPAVPTEPLIPSEYEKLAKGCEENPEDFNGWVYLLQYVEQEN
HLGVVRKAFDAFFLRYPYCYGYWKKLADTEKKHGNAQVAEEVYRRGVHAIPLSVDLWLHY
LSFIKDNADPEDPETPSRIRAAYEHAVLAAGTDFRSDRLWEAYINWETEQERLANVTAIY
DRILGIPTQLYSQHLQRFKEHVQNNNPKHFLSEEEFVQLRVELAKANAVTVNEDGEEATP
AEPEGLPAGTEDLPDPAKRVTEIENMRHKVIELRQEVFNQNEQEVSKRWAFEEGIKRPYF
HVKALEKTQLSNWKEYLEFEIENGTPERVVVLFERCLIACALYEDFWMKYAKYLESYSIE
GVRHVYKKACTIHLSKKPNIHLLWAAFEEQQGNIEEARGILKSLEEVVPGLAMVRLRRVS
LERRHGNLEEAEALLSEAMASGKNASETSFYAVKLARQLLKVQRSLTKARKVLLETIDKD
QTSPKLYLNLLELEYSGDVQQNEAEILACFDRALSSPLPLDCRLTFSQRKVEFLEDFGSD
INKLVTAYDEHQKLLKEHESTKRKAENGSQEPESKRQRTDDHPGSGHMMQGDNSAYNYNW
YQQQYNNWGQHSWGQYNQYAQQYNQYYPPPPT
NT seq 2439 nt   +upstreamnt  +downstreamnt
atggaagatactgacctgcacctctcagacgagcccatgacggggatgttggacacagac
agccctgagagtgtggagtccccagccatggagggcaacggagaggacttcctccctgac
ctgcctgtcctcacgcatgctgctgaatggaccatggatcaggatccccataacctcacc
acggttatccacgactcggactcagagtcagatcagtcgtcgccagaggtaatagagcag
caccaggtccagcagtctgatctaggatctgttgaacaggcggtgcagcacttccagcta
gcgagcgctgaactcttccaagatgagcgtcgggagcatgaggattcagatgagcagtct
cgttctccacaggcagaacaacagaatcaaatggaggcatcgtcagacgagagtcaggat
gggcacaacaacacagccacagagcctttgatacagagcgagaagttgtctgacgctgga
gaacagcaacaagatccagtccaagcccagccaccaatggttgcagaagatagtagccca
gctaacatggaacttgaagaatccaaagagacagagcaggtggaccctgttgaggaacca
gctgtccctacagagcctcttatcccttctgagtatgagaagctggctaaagggtgtgag
gagaaccccgaagacttcaatggttgggtctacctgctgcagtatgtggagcaagagaat
catcttggtgtggtgaggaaggcgtttgatgcgtttttcttgcgctacccctactgctac
ggctactggaagaagttagctgacactgagaagaaacatggcaatgcacaggtggcagag
gaggtgtaccggcggggtgtgcatgccatccccctcagtgtggacctgtggctccactac
ctgtccttcatcaaggacaacgctgaccctgaagacccagagacaccgtcacgcattaga
gctgcgtatgagcatgctgtgttggcagcagggacagacttccgctctgaccgtctgtgg
gaggcctacatcaactgggagacggagcaggagagattggccaacgtcacggccatctac
gatcgtatcctgggcatacccacccagctctactcacagcacctccagaggttcaaagag
catgtgcagaacaacaaccccaaacacttcctgtcggaggaggagtttgtccagctcagg
gtggagctagccaaagccaatgcagtcacagtcaatgaggatggagaggaagcaacaccc
gcagagcctgagggactcccagccggcaccgaggacctcccagatcctgctaagagagtg
acggagattgagaacatgcgccacaaggtgatcgagttgcgtcaggaggtgttcaaccaa
aacgagcaggaggtcagcaagcgctgggccttcgaggaggggataaaacggccctacttc
cacgttaaagccctggagaagacccagctcagcaactggaaggagtatctggaatttgag
atcgagaatggcactcccgaacgcgtggtcgttttgttcgaacgctgcctcatcgcctgt
gctctctacgaggacttctggatgaagtacgcaaaatatctagagagctacagcattgag
ggagtgagacatgtgtacaagaaggcgtgtaccatccacctatccaagaagcccaacatt
cacctgctgtgggctgcgttcgaggagcagcaggggaacatagaggaggcgcgcggcatc
ctgaagtctctggaagaggtggtaccgggcctggccatggtgcgtctgcggcgggtcagc
ctggaacgtcgccacggcaacctggaggaggcagaggccctgctgagcgaggcgatggca
tcggggaagaacgccagcgagacgtcattctacgccgtgaagctggcccggcagctgctg
aaggtgcagaggagcctcaccaaggcccgcaaggtgttgctggaaaccatagacaaggac
cagacgagtcctaagctgtacctgaacctgctagagctggagtacagtggggacgtgcag
cagaatgaggctgaaatcttggcctgcttcgaccgcgccctgagcagcccgctgcccctc
gactgccgcctcaccttctctcagcgcaaggtcgagttcctcgaggactttggcagcgac
atcaataagttagtgactgcatacgatgaacaccagaagcttctgaaagaacatgagtcg
acaaagaggaaagcagagaatggctcccaggagcccgagtcgaagagacagcgtacagat
gaccacccaggctcagggcacatgatgcagggagacaactctgcctacaactacaactgg
taccaacaacagtacaataactggggccagcattcctggggacagtacaaccagtatgcc
cagcagtataaccagtactacccccctccaccaacatga

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