Oncorhynchus mykiss (rainbow trout): 110529851
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Entry
110529851 CDS
T07259
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110529851
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110529851
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_19
Methyltransf_FA
Motif
Other DBs
NCBI-GeneID:
110529851
NCBI-ProteinID:
XP_021468128
Ensembl:
ENSOMYG00000015814
UniProt:
A0A8C7VLJ9
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Position
8:complement(35306928..35321805)
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AA seq
812 aa
AA seq
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MEDTDLHLSDEPMTGMLDTDSPESVESPAMEGNGEDFLPDLPVLTHAAEWTMDQDPHNLT
TVIHDSDSESDQSSPEVIEQHQVQQSDLGSVEQAVQHFQLASAELFQDERREHEDSDEQS
RSPQAEQQNQMEASSDESQDGHNNTATEPLIQSEKLSDAGEQQQDPVQAQPPMVAEDSSP
ANMELEESKETEQVDPVEEPAVPTEPLIPSEYEKLAKGCEENPEDFNGWVYLLQYVEQEN
HLGVVRKAFDAFFLRYPYCYGYWKKLADTEKKHGNAQVAEEVYRRGVHAIPLSVDLWLHY
LSFIKDNADPEDPETPSRIRAAYEHAVLAAGTDFRSDRLWEAYINWETEQERLANVTAIY
DRILGIPTQLYSQHLQRFKEHVQNNNPKHFLSEEEFVQLRVELAKANAVTVNEDGEEATP
AEPEGLPAGTEDLPDPAKRVTEIENMRHKVIELRQEVFNQNEQEVSKRWAFEEGIKRPYF
HVKALEKTQLSNWKEYLEFEIENGTPERVVVLFERCLIACALYEDFWMKYAKYLESYSIE
GVRHVYKKACTIHLSKKPNIHLLWAAFEEQQGNIEEARGILKSLEEVVPGLAMVRLRRVS
LERRHGNLEEAEALLSEAMASGKNASETSFYAVKLARQLLKVQRSLTKARKVLLETIDKD
QTSPKLYLNLLELEYSGDVQQNEAEILACFDRALSSPLPLDCRLTFSQRKVEFLEDFGSD
INKLVTAYDEHQKLLKEHESTKRKAENGSQEPESKRQRTDDHPGSGHMMQGDNSAYNYNW
YQQQYNNWGQHSWGQYNQYAQQYNQYYPPPPT
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggaagatactgacctgcacctctcagacgagcccatgacggggatgttggacacagac
agccctgagagtgtggagtccccagccatggagggcaacggagaggacttcctccctgac
ctgcctgtcctcacgcatgctgctgaatggaccatggatcaggatccccataacctcacc
acggttatccacgactcggactcagagtcagatcagtcgtcgccagaggtaatagagcag
caccaggtccagcagtctgatctaggatctgttgaacaggcggtgcagcacttccagcta
gcgagcgctgaactcttccaagatgagcgtcgggagcatgaggattcagatgagcagtct
cgttctccacaggcagaacaacagaatcaaatggaggcatcgtcagacgagagtcaggat
gggcacaacaacacagccacagagcctttgatacagagcgagaagttgtctgacgctgga
gaacagcaacaagatccagtccaagcccagccaccaatggttgcagaagatagtagccca
gctaacatggaacttgaagaatccaaagagacagagcaggtggaccctgttgaggaacca
gctgtccctacagagcctcttatcccttctgagtatgagaagctggctaaagggtgtgag
gagaaccccgaagacttcaatggttgggtctacctgctgcagtatgtggagcaagagaat
catcttggtgtggtgaggaaggcgtttgatgcgtttttcttgcgctacccctactgctac
ggctactggaagaagttagctgacactgagaagaaacatggcaatgcacaggtggcagag
gaggtgtaccggcggggtgtgcatgccatccccctcagtgtggacctgtggctccactac
ctgtccttcatcaaggacaacgctgaccctgaagacccagagacaccgtcacgcattaga
gctgcgtatgagcatgctgtgttggcagcagggacagacttccgctctgaccgtctgtgg
gaggcctacatcaactgggagacggagcaggagagattggccaacgtcacggccatctac
gatcgtatcctgggcatacccacccagctctactcacagcacctccagaggttcaaagag
catgtgcagaacaacaaccccaaacacttcctgtcggaggaggagtttgtccagctcagg
gtggagctagccaaagccaatgcagtcacagtcaatgaggatggagaggaagcaacaccc
gcagagcctgagggactcccagccggcaccgaggacctcccagatcctgctaagagagtg
acggagattgagaacatgcgccacaaggtgatcgagttgcgtcaggaggtgttcaaccaa
aacgagcaggaggtcagcaagcgctgggccttcgaggaggggataaaacggccctacttc
cacgttaaagccctggagaagacccagctcagcaactggaaggagtatctggaatttgag
atcgagaatggcactcccgaacgcgtggtcgttttgttcgaacgctgcctcatcgcctgt
gctctctacgaggacttctggatgaagtacgcaaaatatctagagagctacagcattgag
ggagtgagacatgtgtacaagaaggcgtgtaccatccacctatccaagaagcccaacatt
cacctgctgtgggctgcgttcgaggagcagcaggggaacatagaggaggcgcgcggcatc
ctgaagtctctggaagaggtggtaccgggcctggccatggtgcgtctgcggcgggtcagc
ctggaacgtcgccacggcaacctggaggaggcagaggccctgctgagcgaggcgatggca
tcggggaagaacgccagcgagacgtcattctacgccgtgaagctggcccggcagctgctg
aaggtgcagaggagcctcaccaaggcccgcaaggtgttgctggaaaccatagacaaggac
cagacgagtcctaagctgtacctgaacctgctagagctggagtacagtggggacgtgcag
cagaatgaggctgaaatcttggcctgcttcgaccgcgccctgagcagcccgctgcccctc
gactgccgcctcaccttctctcagcgcaaggtcgagttcctcgaggactttggcagcgac
atcaataagttagtgactgcatacgatgaacaccagaagcttctgaaagaacatgagtcg
acaaagaggaaagcagagaatggctcccaggagcccgagtcgaagagacagcgtacagat
gaccacccaggctcagggcacatgatgcagggagacaactctgcctacaactacaactgg
taccaacaacagtacaataactggggccagcattcctggggacagtacaaccagtatgcc
cagcagtataaccagtactacccccctccaccaacatga
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