Oncorhynchus mykiss (rainbow trout): 110529920
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Entry
110529920 CDS
T07259
Symbol
puf60a
Name
(RefSeq) poly(U)-binding-splicing factor PUF60a isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110529920 (puf60a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110529920 (puf60a)
Spliceosome [BR:
omy03041
]
Complex A
U2 snRNP components
U2 related factors
110529920 (puf60a)
Complex B
110529920 (puf60a)
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GFIT
Motif
Pfam:
RRM_1
RRM_10
DUF1543
Motif
Other DBs
NCBI-GeneID:
110529920
NCBI-ProteinID:
XP_021468258
Ensembl:
ENSOMYG00000004401
UniProt:
A0A8C7NLX6
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Position
8:complement(42431791..42526586)
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AA seq
553 aa
AA seq
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MAVAVSAGGEALMMENGQSTASKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTLAH
QQQQLTNLQMASLTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTVRQAFA
PFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLSLEQMNSVMLGGRNIKVGRPSNIGQ
AQPIIDQLAEEARAFNRIYVASVHPDLSDEDIKSVFEAFGRIKSCTLARDPTTGKHKSYG
FIEYDKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAAAVAAAAAT
AKITAQETVGSSVLGALAGPALLSQQLGGLPQAVMAAQAPGVITGVTPVRPTLPVLPQVG
LVNPVLALPPVLVTSLVAAQEAKKKELEEEAVQDGTGQEPLSEQEHMSISGSSARHMVMQ
KLLRKQEVRLSSHLVLMLRVSNHFNVWITASRLLSTVMVLRNMVGPEDIDDDLEGEVTEE
CGKFGAVNRVIIYQEKQGEEDDAEVIVKIFVEFSMAAEMNKAIQALNNRWFGGRKVIAEV
YDQERFDNSDLSA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcagtttctgcgggaggcgaggctctgatgatggagaatggacagagcacc
gcctcaaagctcggcctgccgcctctcacccctgagcagcaggaggcactgcagaaggcg
aagaagtatgccatggagcaaagcattaaaagtgtgcttgtcaaacagaccctggctcat
caacaacagcagctcaccaacttacagatggcatcgctgacaatgggctttggcgatccc
ctctcacctttacaatcggtagcggctcagagacagcgagcattagccatcatgtgccga
gtgtacgtgggctccatttactacgagctgggagaggacacggtccggcaggcctttgcc
ccgttcggccccatcaagagcatcgacatgtcctgggactctgttacaatgaaacacaag
ggttttgcgtttgtggagtatgaggtgcctgaggcagcccagctatcccttgagcagatg
aactccgttatgctgggagggagaaacattaaggtgggacgaccgagcaacatcggacag
gcccagccgatcattgaccagctggcagaagaggcacgcgccttcaaccgaatctacgtg
gcgtctgtgcaccccgacctctcggacgaggacatcaagagtgtgtttgaggcgttcggc
cggatcaagtcatgcactctagcgagagaccccactacagggaaacacaagagctacggc
tttattgagtacgacaaggctcagtcctcccaggatgcagtttcctccatgaatctcttt
gacctagggggtcaatacctgcgtgtgggcaaagcggtcaccccccccatgcccctgctc
actccgaccacacctggcggactcccccctgctgcagctgtggcggctgcagctgccaca
gccaaaatcactgcccaggagacggttgggtcatcggtgctgggagcgctggctggaccc
gccctcctctctcaacagttgggtggcctgccccaagccgtcatggcagcccaggccccg
ggggtcatcacaggggtaaccccagtgcggcccactttgcctgtgctacctcaggtgggc
ctggtcaacccagtgctggccttaccaccggtgctggtcacctctctggtggcagcccag
gaggccaagaagaaggaattggaggaggaggccgtgcaggacgggacgggccaggagccg
ctgagtgagcaggagcacatgagcatctccgggagcagcgccagacacatggtcatgcag
aagttgctccgtaagcaagaggtgaggttgtcttctcatctagtgttgatgttgagagtt
tcaaaccatttcaacgtgtggatcacggcctcacgtcttctgtcgacggtgatggtgctg
cggaacatggtaggaccagaggacatcgacgatgacctggagggtgaggtgactgaggag
tgcggcaagtttggtgctgtcaaccgtgtcatcatctaccaggaaaagcagggcgaggag
gatgatgcggaggtcattgtcaagatctttgtggagttctccatggcggcagagatgaac
aaggccatccaggcactcaataatcgctggtttggaggtcgcaaggtcattgctgaggtg
tacgaccaggagcgctttgacaacagcgacttatctgcataa
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