Oncorhynchus mykiss (rainbow trout): 110530071
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Entry
110530071 CDS
T07259
Name
(RefSeq) transcription factor HES-1-B isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03460
Fanconi anemia pathway
omy04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
110530071
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110530071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110530071
03400 DNA repair and recombination proteins [BR:
omy03400
]
110530071
Transcription factors [BR:
omy03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
110530071
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
110530071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
110530071
NCBI-ProteinID:
XP_021468540
Ensembl:
ENSOMYG00000004347
UniProt:
A0A8C7NJP1
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Position
8:complement(52164117..52174262)
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AA seq
267 aa
AA seq
DB search
MPADILEKTSPSSVAATPSRVSGTPDKPRTASEHRKSSKPIMEKRRRARINDSLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNMQRLQMTAAISRDPSVFGKYRAGFSECMSE
VTRFMSTCGGVNTEIRSRLLSHLAGCVSQINTVNFSTQCQIPTYPPHPAHPLLAQAIAQI
PSASPQLNGIMPCKSGSPINLTSEMAKLYSGLQIVPGATDGQFAILIPSVALTHTRAPNT
IHGNPALAVPVSLVAPPVTADSVWRPW
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgatattttggagaaaacatccccatcctctgtcgcagccactccgtcgagg
gtcagtggaactccggataaaccaaggactgcctcagagcacagaaagtcctcaaagcca
attatggagaagagaagacgtgcgcgaatcaatgacagccttggtcagctaaagaccctc
atcttggatgcactaaaaaaagatagctcgagacattcgaagctcgagaaggcggacatc
cttgagatgactgtgaagcaccttaggaatatgcagcgtctccaaatgactgcagctata
agcagggatccatcagtctttggcaagtacagagcgggattcagcgaatgcatgagtgaa
gtcacccgttttatgtccacgtgtggaggggtgaacacggagatcaggtctcgacttctc
agccacttagccggctgtgtgtcacagataaacaccgtaaacttctcaactcaatgccag
atccccacctaccctccgcatccagcgcatccattgcttgcccaagccattgcgcaaatc
ccaagtgcatctcctcagttaaatggaataatgccttgcaaaagtggctcgcctatcaac
ctcacatcagaaatggctaaattatacagtggacttcagattgtgccgggggcgacagat
ggacaattcgctattctgattccaagcgtggctcttacgcatacgagggcgccaaacacg
atacatggcaatccagcacttgcggtgcctgtgtcacttgttgcgcctcccgtcaccgca
gactccgtgtggagaccatggtag
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