Oncorhynchus mykiss (rainbow trout): 110530078
Help
Entry
110530078 CDS
T07259
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110530078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110530078
03016 Transfer RNA biogenesis [BR:
omy03016
]
110530078
Enzymes [BR:
omy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
110530078
Messenger RNA biogenesis [BR:
omy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
110530078
Transfer RNA biogenesis [BR:
omy03016
]
Prokaryotic type
tRNA degradation factors
110530078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH_KRR1_2nd
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
110530078
NCBI-ProteinID:
XP_021468551
Ensembl:
ENSOMYG00000045014
LinkDB
All DBs
Position
1:complement(79093139..79109337)
Genome browser
AA seq
770 aa
AA seq
DB search
MKHLLRLGPTLARLNVRLCHQSVWNSHGTIQKVGVNLGEKKLEISTGKLARFADGSAVVQ
LGDTTVMVTAVSKTKPSPSHFMPLVVDYRQKAAAAGRIPTNHLRRELGTTENEILTSRLI
DRAIRPLFPAGYFYDTQVLCNLLAVDGVNDPDVLAINGASAALTLSDIPWNGPIGAVRIG
LVDGEFLVNPTRKQMASSTINLIVAGAPLSQVVMIEASAENVLQQDFCHAVKVGVKHTQQ
IILAIQQMAREAKVTKRTPPKIFSAPEEMIEYTRQFASEKVYAVFTDFTHDKISRDDAIN
KVRLETEEQIKEKCPHAEPYEVMESFNMVSKEVFRNLVLNEYRRCDGRNLTSLRNISCEA
DIFKPLHGSALFQRGQTQVLCSVTFDSLESSIKTDIITTALSGVKDKNFMLHYEFPPYAT
NEIGKMSGMNRRELGHGALAEKSLRPVIPKDFPFTIRVTSEVLESNGSSSMASACGGSLA
LMDAGVPITSAVAGVAIGLISKANPEKPSEIQDYRILTDILGIEDYLGDMDFKLAGTNKG
INALQADVKIPGLPLKLVMEAIQQATVAKREILGIMNNTIAKPRANRKENGPVVENVRVP
VSRRARFVGPGGYNLRRLQAQTGVTISQVDEETFSVFAPTPGAMNEAQEFITEICKDDQE
QQLEFGAVYTATIMEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIKHPSAIGLEVGQQIQV
KYFGRDPTDGRMRLSRKVLQSPAATVVKTLSEKQSITMGTGNGQATSNSS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatttactgaggcttgggcccacgctggccagactaaatgtgcggttgtgccac
caaagtgtctggaacagccatggaacgatacaaaaagtgggtgtgaatttgggtgagaaa
aaacttgagatctcaacagggaaacttgccagatttgcagatgggtcagctgttgtgcag
cttggggatacaacagtgatggtgacagctgtcagcaaaacaaaaccgtccccctcccat
tttatgccactagtggtggactacagacagaaagcagctgctgctggtagaatccccact
aaccacttgcggcgggagttgggcaccactgaaaatgagattctgactagtaggctaata
gacagggcaatcagacccctttttcctgctggttatttctatgacactcaggtcctgtgt
aacctgttggcagttgatggtgttaatgatccagatgtactggctatcaatggagcctct
gctgcccttaccctttctgacattccctggaatgggcccattggtgcagtgcgcattggc
ctggtggatggcgagttcctggtgaacccaacacgaaagcaaatggcttccagcactatc
aatctgatagtggctggagcacctctcagccaagtggtgatgatcgaggcatctgctgag
aatgtgttgcagcaggacttctgtcatgcagtcaaggttggcgtgaagcacacacagcag
atcatattggctattcagcagatggccagagaagcgaaagtgaccaagcgcacccctccc
aaaatattttctgcgcccgaggaaatgattgaatacacacgacaatttgcctctgaaaag
gtctatgctgttttcacagacttcactcatgacaagatttccagagatgacgccattaac
aaagtgcgactagaaacagaggaacaaataaaagagaaatgtcctcatgcagaaccttat
gaggtgatggaatccttcaacatggtgtccaaagaggtcttccgcaatctggttttgaat
gaatataggaggtgtgatggaagaaacctgacttcattaagaaatatttcctgtgaggca
gacatctttaagccccttcatgggtctgcacttttccagaggggacagacacaggttctg
tgctctgtaacatttgactccttggagtccagtattaaaacagacatcattactacagca
ttaagtggagtcaaagacaagaatttcatgcttcactatgagtttcctccttacgcaacc
aatgagattggaaagatgagtggaatgaacagaagagagcttggtcatggggcactggcg
gagaagtctttgagacctgtcatcccaaaagacttccccttcactattagagtcacctct
gaggttttggagtctaatggttcctcgtcgatggcgtcagcatgtggaggcagtttggct
ttgatggatgctggtgtgcctattacatcagctgtggcaggtgtagctattggactcatc
tccaaggcaaacccagagaagccatcggaaatccaggactaccgaatactgactgatatt
ctgggaatcgaggattacctaggagacatggacttcaaactggctggaacaaataagggt
atcaatgccttacaggctgatgtgaagattccaggcttacctctgaaacttgtaatggag
gctattcaacaagccacagttgccaagagggagattttgggcatcatgaacaataccatt
gccaagcccagggctaacagaaaggagaatggtccggttgtcgaaaatgtcagagtcccg
gtctccagacgagcacgctttgttgggccagggggctataacctccgcagactacaagct
caaacaggtgtgacgataagccaggtggatgaggagaccttctctgtgtttgcacctact
cctggtgccatgaatgaagcccaggagttcatcacagaaatctgcaaagatgatcaagag
cagcagctggagtttggtgctgtttacactgccaccatcatggaaataagggacattggt
gtcatggtgaagctgtatcccaatatgagtgctgttctgctccataactctcagctggac
cataaacggataaaacacccaagtgctattggattagaggttggacagcagattcaggtt
aaatactttgggcgagacccaacagatggaagaatgaggctttcaaggaaagtgttacaa
tctccagcagcaacagttgttaagacactgagtgagaaacagagcatcaccatgggcaca
gggaatggccaagcaaccagcaactcgtcttga
DBGET
integrated database retrieval system
