Oncorhynchus mykiss (rainbow trout): 110530095
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Entry
110530095 CDS
T07259
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omy01009
]
110530095 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110530095 (rpap2)
Enzymes [BR:
omy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
110530095 (rpap2)
Protein phosphatases and associated proteins [BR:
omy01009
]
HAD phosphatases
Fcp/Scp phosphatases
110530095 (rpap2)
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110530095 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
110530095
NCBI-ProteinID:
XP_021468577
Ensembl:
ENSOMYG00000010283
LinkDB
All DBs
Position
8:53001160..53015071
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AA seq
673 aa
AA seq
DB search
MENEPRKRVARSSKPGKRDGKSVKEAQAAAEEARRYLTREAVRETLREKLDLEKRALQVV
ERLLEDSVADDFLVDCARLITTANYKDTVEERSIVKLCGYPVCSNKLGKVSTQQFKISTK
TNKVYDITERKSFCSNFCYKASKSFELQISKSPLWLRQHESPPDVKLMKKGDGGSTGEEV
RLAERRLREVDVENPLPLDSVSPEDPRRSPTAGHSDDSDAEHDFVSSVVSQRRGPRVHWG
DLPKRTAEGEGREPGEGEDRERRSGGKDTTVPKQIQTNEAEDKEENTEESQKAQRKPSNG
TDGRQQHTTDTNHQSEQQSFLGERGSPEGQSMEEAAELLSQVTIQDRDPATATSSALTAY
SVQNQEPAPNPSPQGDPAQPTQPGINITQVGMSRRGAQGLRGLLKGHEAGTKPVSVRLNL
LEGLRRTFTEWMTEETMKFLYGPDHFSKTLIETKKEEEEELDEDDLEDIVKDGGEGRETD
SQGGPGRPLAPAPDYDTLRRETEEMGLRVREFYEGTKEVQRVSGKQHARGGDSENQGGAL
PLVDSHAQHLIQKRITVEKLTKGLRDIVGPLRLTMTDVSSDLNRLVRTFRFTNTNIIHKG
PEWTLIAVVLLHLLSEVSPVVREALERPASVDYLSTLMQELPLLDRDLQSLVQLLRTAEL
CPHEHTEKRQTNH
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgagccacgaaaaagagtcgctcgctcttcaaaaccaggcaaaagggatggg
aagagtgtcaaagaagcacaggccgctgcagaggaagcaagaaggtatttaacgagagag
gcagtgagggagaccctgagagagaagctggatctggagaagagggctctgcaggtggtg
gagcgtctcttggaggacagcgtagcagacgacttcctggttgactgtgcaaggttgatc
actactgccaattacaaagacacagttgaggagaggtccattgtgaagctgtgcggttat
cctgtctgttcaaacaaactgggcaaggtctccactcaacagttcaaaatttccaccaaa
accaataaagtctatgacatcacggaacgcaagagcttctgcagtaacttctgctacaaa
gcctccaagtcctttgagctgcagatatcaaagagccctctgtggctgaggcagcacgag
agccccccagatgtgaaattaatgaagaaaggagatggcggtagcaccggagaggaggtg
aggctggctgagaggcgtctcagagaggtcgatgtggagaacccccttcccttggactcc
gtgtccccagaggaccccaggcgctcccctacagccggccacagcgacgacagcgacgca
gaacacgactttgtctcaagcgtggtctcccagcgacggggacccagggtgcactggggc
gatctgcccaagcgcaccgccgaaggggagggtagggaacctggagagggggaggacagg
gagagaaggtcgggagggaaggacacaacggtgcccaagcaaatacaaacaaacgaggcg
gaagacaaggaggagaatacagaagaatcacagaaagcacaaaggaagccaagcaatggg
acagatggacgccaacagcacaccacagatacgaaccaccagagtgagcagcaatctttc
ctgggagagagagggtcgccagagggccagtctatggaggaagctgcagagctattgagc
caagttacaatacaggatcgagacccagccacagctacgtcttctgcactaacagcctac
agtgtacagaatcaagaaccagctccaaaccccagtccacagggggacccagcacagccc
acccagcctggcatcaacatcacacaggtgggcatgagcagaaggggagcccaggggctc
cgggggctcctcaagggccacgaagccgggactaaacctgtctcggtccggctgaacctt
ctagaaggcctaaggaggaccttcactgaatggatgactgaggagactatgaagttccta
tatggcccagaccactttagtaaaacactgatagaaacaaagaaggaggaggaagaagag
ctagatgaagatgacttggaggacattgtgaaggatggtggggagggacgtgagactgac
tcccaagggggtccaggaaggcccttggccccggccccagactacgacaccctacgcagg
gagacagaggagatggggctgagggtgagggagttctacgaagggacgaaggaagtccag
cgggtgtcagggaaacaacatgccagaggcggcgactcagagaaccagggtggggcactc
ccgttggttgactcccatgcccagcacctcatccagaaacggattacagtggagaagctc
actaaaggcctgagagacatcgtgggtcctctgcgtctcaccatgactgacgtctccagt
gacctcaacaggctggtcagaaccttcaggtttacaaacaccaacatcatccacaaaggc
ccagagtggaccctgattgcagtggtgctcctccatttgttatcagaggtatccccagtg
gtgcgggaggccctggagaggccagcctcagtcgattacctctctactctgatgcaggag
ctcccactgctggaccgggacctgcagagcctggtccagctactcagaaccgcagagctc
tgtccacacgagcacacagagaaacggcagacaaatcactga
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