KEGG   Oncorhynchus mykiss (rainbow trout): 110530146
Entry
110530146         CDS       T07259                                 
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110530146
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    110530146
Membrane trafficking [BR:omy04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    110530146
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   110530146
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_IFT122_1st ANAPC4_WD40 PEP5_VPS11_N Beta-prop_HPS5 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N HEAT_GCN1
Other DBs
NCBI-GeneID: 110530146
NCBI-ProteinID: XP_021468671
Ensembl: ENSOMYG00000004282
LinkDB
Position
8:55010905..55025208
AA seq 948 aa
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSAPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKLG
REEPAMSMDTNGKIIWAKHSEVQQANLKAMGDTEIKDGERLALAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELVRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYLSEKVAASQENNEGVTEDGIEDAFEVQGEIQEVVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSSDSEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNAAMVGKLAEGAE
RDGKNNVAFMTYFLQGKLDHCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRESLAKV
NQKAAESLADPTEYENLFPGLKESFVAEQFLRETCLGNSRPATDYPLVTPNEERNILEDA
TGYEPKGVPLSLATLVPGEDCREEITLAAGVLASVLTPSAIPSETEPEPEAAPEEEEGAS
PGSSEARKNKALDELEDDLDNLELDDIDTTDINLDTTDINLEDDFLDD
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgcctctcaggctggacatcaagcggaagctgacagcccggtcagaccgggtgaagagt
gtggacctccacccgaccgagccgtggatgctggccagcctgtacaatggtagtgtctgc
gtctggaaccacgaaacacagaccttggtgaagacctttgaagtgtgtgaccttccagtg
agagcatcaaagtttgtagccaggaagaactgggtcataacaggagccgatgacatgcag
atccgtgtgttcaactacaacaccctggagagggttcacatgtttgaggcccactctgac
tacatccgttgtattgccgtgcatcccacccagccctacatcctcacaagcagtgatgac
atgctgattaagctgtgggactgggagaagaagtggtcttgcagccaggtgttcgagggc
cacacccactacgtcatgcagatcgtcatcaaccctaaagacaacaaccaatttgccagc
gcttctctggacagaaccatcaaggtttggcagttaggctcctctgctcctaacttcacc
cttgagggccatgagaaaggtgtcaactgcattgactactacagtggaggggacaagccc
taccttatatcaggagctgatgaccgcctggtcaagatctgggactaccagaacaagacg
tgtgtgcagaccctggagggacacgcccagaatgtgtcgtgtgtcagctttcacccagag
ctgcccatcatcatcacaggctcagaggacggcactgtgcgcatctggcactcgagtacg
taccgtctggagagcacgctgaactacggcatggagcgcgtgtggtgtgtgtgtggcctg
cgaggctccaacaacgtggccctgggttacgacgaaggcagcatcatcatcaagctgggg
cgtgaggagccagccatgtccatggacaccaatgggaagatcatctgggccaagcactca
gaggtgcagcaggccaacctgaaggccatgggtgacacggagatcaaggacggagagagg
ctggcgctggccgtcaaagacatgggcagctgtgagatctacccccagaccattcagcac
aaccccaacggaaggtttgttgtggtgtgtggagacggagagtacatcatctacactgcc
atggcactgaggaacaagagcttcggctcagcccaggagtttgtctgggcacatgactcc
tctgagtatgccatcagagaaagcaacagtgtggtcaaaatcttcaagaacttcaaagag
aagaagtctttcaagccagactttggggctgaaggtatctatggaggcttcttgctgggc
gtcaggtcagtgaacggtctggccttctatgactgggagaacacagagctggtccgccgc
attgagatccagcccaaacatatcttctggtcagactcaggggagttggtgtgtatagcc
acagaggagtccttcttcatcctgcgctacctgtccgagaaagtagccgcctcacaagag
aacaacgagggagtgacggaggacggcatcgaagacgcctttgaggtccagggggagatc
caggaagtggtgaagacaggtctgtgggtgggagactgcttcatctacaccagctctgtc
aacagactcaactactttgtggggggagagattgtcaccatcgctcacctggacagaacc
atgtacctgctgggctacatccccaaggacgaccgcctgtacctgggcgacaaagagctg
aacatcgtcagctactccctgctggtgtctgtgctggagtaccagacagctgtgatgcgc
agggactttggcatggccgacaaagtgttgcccaccatccccaaggaacagaggacccgt
gtggcccacttcctggagaaacagggcttcaagcagcaggctctggccgtgtcgtcagac
tctgagcacaggtttgagctggccctgcagcttggggagttgaagatcgcctatcagctg
gctgtggaggcagagtcggagcagaagtggaagcagctggcagagctggccatcagtaag
tgccagtttagcctggcccaggagtgcctccatcatgcccaggactacggcggcctgctg
ctgctcgccacggcctcgggcaacgctgccatggtgggcaagctggccgagggcgctgag
cgggacggcaagaacaacgtggccttcatgacttatttcctgcaggggaaactggaccac
tgtctggagctgctgatccggaccaaccggctgcccgaggcagccttcctggcccgcacc
tacctgcccagccaggtgtccagggtggtcaagctgtggagggagagcctggccaaggtc
aaccagaaggcggccgagtcgctggccgaccccaccgagtatgagaacctgttccccggt
ctgaaggagtcgtttgtggccgagcagttcctccgggagacctgcctgggcaactcccgg
ccagccaccgactaccctctggtcacacccaatgaagaacgtaatatactagaggatgcc
acgggctacgagcccaaaggagttcccctctcacttgccacactggtaccaggtgaagac
tgcagggaagagatcacgttggctgctggagtgctggcatccgtgttgacgccctccgcg
atcccctcggagacggagccagagcctgaggctgcacctgaagaggaagagggggcgagc
cccggttcatctgaggcacggaagaacaaggccctggacgaacttgaagatgacctggac
aacttggagctggacgacatcgacaccacggacattaacctggacaccacagacattaac
ctggaagatgacttcttagatgactga

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