Oncorhynchus mykiss (rainbow trout): 110530158 Help Entry 110530158         CDS       T07259                                  Name (RefSeq) roquin-1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism omy  Oncorhynchus mykiss (rainbow trout) Brite KEGG Orthology (KO) [BR:omy00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:omy03000]     110530158    04121 Ubiquitin system [BR:omy04121]     110530158 Transcription factors [BR:omy03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     110530158 Ubiquitin system [BR:omy04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     110530158 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4 zf-CCCH zf-C3HC4_2 zf-CCCH_4 zf_CCCH_4 Prok-RING_4 FYVE NS3_helicase_C Baculo_IE-1 zf-RING_6 RING_XB3-XBAT31 Motif Other DBs NCBI-GeneID:  110530158 NCBI-ProteinID:  XP_021468683 Ensembl:  ENSOMYG00000005000 UniProt:  A0A8C7NNH1 LinkDB All DBs Position 8:55223558..55261073 Genome browser AA seq 1106 aa AA seqDB search MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAIATD IEQLPVNTALLQLVGGQVPKIQPVALITSPEDAQHYEEASQCVEELALYLKPLSNTRGVG LSSTTLSMLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADPQQPPQHSKYKTYMCR DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLVARLPGSSGLLSDDGLSLDVGVTRKPS PLTNGSAVPPMPQLIARGTDLVTYDLLRKPKMDGGSNSSPESPPDSLDSGPKQGYPQPPH AMGYSRGPGDHMSMPKQMPSGVVPRGPQMYPQQLPEMYYSDSRHPPSSSQYDPSQYPQGY PYQQPPQYAPQRYIRNPPPPSEPAGLPYQDPYPDYGPPDRPYPAPHSGPPFSYPPPSHYD TRGRHGPYPGPPPPPQPYPSQRDDMVRMSPAPLEGPPYHQEQAARERYPPEGFYPPGAQP QPLRSYVREPYGRSSQPSLDYLHHRRKELMAQLEERKVIAPSPTLPHTFPSDYPPEYGEE SSKAFGKCREPDYAGQYSPWSCDTIGSYIGTKDSKPKDVMAPGAMEMMNVDGNGRRGEPS MDAQVRRGTEVKDDDPIIPFGPQPTVSRFGAISRTSKTGYQTTGPMQALGSTQGPNPKHM AIAAEYSYENHGGWGGASYPSHQTVSSSQGHFSERLPMPTQDREQLKTELQQVNQQINQQ SQIHGMELSQPGQNQGQQGGKWPGPAGGSGSAAPVSSEQLSIELHQVEREIGKRTREMDM DSQVTHEVLYKTKTAENGQQDHKAQLEEIALALGEVSNGSSGLVQDGGVGGAMLSLTTRA SSLSLCSEPGPGGSDLQKNGVVHSCS NT seq 3321 nt NT seq  +upstreamnt  +downstreamnt atgcccgtgcaagccccacaatggacagagttcctgctgtgtcccatttgcactcagacg ttcgaggagacggtgcggcggcccatttcgctgggctgtggccacacagtctgcaagatg tgcctaaacaagctgcaccgcaaggcctgccccttcgaccagacggccatcgccactgac attgagcagctgcccgtcaacacagccctgctgcagctggtggggggacaggttcccaag atccagccggtggcccttatcaccagcccagaagacgcgcagcactatgaggaggccagt cagtgtgtggaggagctggccctctacctcaaacccctcagcaacaccagaggggtgggt ctgagcagcacgaccctgagtatgctgagtcgacccatgcagaggaagctggtgaccctg gtccactgtcagctggtggaggaggagggccgggtgcgggccatgagggcagcaaggtct ctgggggagcgcacagtcacagagctcatcctgcagcaccaaaacccccagcaattatcg tccaatttgtgggccgccgtccgggccaggggctgccagttcttgggtccagccatgcag gaggaggctctgaagctggtgctgctggctctggaggacggctcggccctgtccaggaag gtcctggtgctgttcgtggtccagcggctggagccacgcttcccccaggcctccaaaacc agcataggccacgtggtgcagctcctttacagggcctcctgctttaaggtgaccaagcgg gacgaggactcgtcactgatgcagctgaaggaggagttccggacgtacgaggcactgcgg cgcgaacacgactcccagattgtccagatcgccatggagggcggcctccgcatcgcccct gaccagtggtcctccctgctctacggggaccagtctcacaagtcccacatgcagtccatc atcgacaagttgcagacgccggcttcgtttgcccagagcgtccaggagttgaccatcgcc ctgcagaggacgggcgaccccgccaaccttaaccgcctccgaccacacctggagctcctg gccaacatcgacccgagccccgacgccccccctcccacgtgggagcagctggagaaaggt ctggtggcggtgaagactgtagtccacggcctggtagatttcatccagaaccacagcaaa aagggagccgacccacaacagcccccccagcacagcaagtacaagacttacatgtgtcgg gacatgaagcagaagggaggctgtcctcgaggagccagctgtaccttcgcccactctcag gaggagctggagaagtaccgtaaaatgaacaagcgtttggtagctcgcctccctggctca tctggcctgctgtcggacgatggactctctctggacgtgggggtgacccggaagccctcg cccctcaccaacggctcagccgtaccccccatgccccagctcatcgcccgtggcaccgac cttgtgacctacgacctgttgcgcaagcccaagatggacggcgggagcaacagctccccg gaatcgccccctgactctctggactcggggcccaaacaagggtacccccagccaccccat gccatgggctactccagggggccaggagaccacatgtccatgcccaagcagatgcccagt ggcgtggtgccccgggggcctcagatgtacccgcagcagctacctgagatgtactactct gactctcgccacccgccctcctcctcgcagtacgacccctcgcagtatccccaaggttac ccctaccagcagcccccccagtacgccccccagcgctacatccgcaacccccctcccccc agcgagcccgccggactcccctaccaggacccctaccctgactacggcccacccgatcgc ccttacccggccccccactcgggccctcccttttcctaccctcccccatcccactatgac acccggggccgtcacggcccttaccccggccccccccctccgccccagccctacccctcg cagagggacgacatggtccggatgagccctgcacccctggaagggcccccttaccaccag gagcaggctgccagggagaggtaccccccagaaggattctacccaccaggggcccagccc caacccttgaggtcctacgtcagagagccgtacgggcgctcctcccagcccagcctagac tacttgcaccaccgccgtaaggagctgatggcccagctggaggagaggaaggtcatcgct ccctcgcccaccctcccccacaccttccccagcgactaccccccagagtatggggaggag agctccaaagcctttgggaagtgcagggagcccgactacgcgggccagtactctccctgg tcctgtgacaccatcggctcctacatcggcaccaaggactcgaagcccaaagatgtcatg gcgcccggggccatggagatgatgaatgtggacggtaatggtagacggggggagccctcc atggatgcccaggtcaggcgggggacagaggtgaaggacgacgaccccatcatccctttc ggcccccagcccactgtgtcgcgcttcggagccatctcacgcacctccaagacaggctac cagacgacaggccccatgcaagccttgggctccacccagggacccaaccccaagcacatg gccatagccgcggagtactcctatgagaaccacggaggctggggcggtgcctcctacccc tcccaccaaactgtctcctcctctcagggacacttcagtgaaaggctgcctatgccaact caggacagagagcagctgaagactgagctccaacaggtcaaccagcagatcaaccaacag tctcagatccacggcatggagctctcccagccaggtcagaaccagggccagcaggggggg aagtggcctggtccagcggggggttccggcagcgctgccccagtgtccagtgaacagctc agcatagagctccaccaggtggagagggagatcggcaagaggacccgcgagatggacatg gacagccaggtgactcatgaggtcctgtacaagacgaagactgcagagaatggccagcag gaccacaaggcccagctggaggagattgctctggccctgggtgaggtgtcgaatggctcc agcggtctagttcaggatggtggtgtgggcggagccatgctgtcactgaccactagggcg tcatcgcttagcctgtgttctgaaccaggacccgggggctctgatctgcagaagaacggt gtggtccattcctgctcctag

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