Oncorhynchus mykiss (rainbow trout): 110530183
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Entry
110530183 CDS
T07259
Name
(RefSeq) polypyrimidine tract-binding protein 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110530183
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110530183
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_ACIN1
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
110530183
NCBI-ProteinID:
XP_021468724
Ensembl:
ENSOMYG00000016765
UniProt:
A0A8C7QG09
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All DBs
Position
8:complement(56275091..56294377)
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AA seq
542 aa
AA seq
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MDGIATDVAVGVKRGSDELNLYSTSPNSVTANGNDSSKKLRVEDRMESPPSRVLHIRKLP
SEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVPVF
IQFSNHKELKTDSALNQRAQAVLQAVSAVQEGGSPNSDTSALDSVLAQAPSPVLRIIIDN
MFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQARLSLDGQNIYNSC
CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSLDPAMAAALNKDSSLLGTPSGM
VAPYSSGGGFQSSLSYSQGGGAISPLSAAAAAAAAAGRVALSGHSGCSGVLLVSNLNEEM
VTPQSLFTLFGVYGDAQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTL
SKHQTVQLPREGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNVPEDVTEE
DLRQLFSNAGGTVKAFKFFQGHKMALLQMSTVEEAIQALMDLHNYDMGSNHHLKVSFSKS
TI
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgccactgatgttgcagttggcgtgaagagaggctcagatgaattaaat
ctctacagcaccagccctaactctgtgactgctaacggcaatgacagcagtaaaaaactg
agagtagaggacaggatggagagtcccccatcccgggtgctccacatccggaagctgccc
agtgaggtgtctgagacggaggtcatcgccctgggcctaccgttcggcaaggtcaccaat
atcctcatgctgaagggcaaaaatcaggcgttcctcgagctgggtacagaggaggcggcc
gttacaatggtgaactactatacggcagtgacgcctcaggtccgcaacgtcccagtgttc
atccagttctctaaccacaaggagctcaagacagacagtgctctcaaccagcgtgcacag
gctgtcctccaggcagtgtcggcggttcaggagggtggctctcccaactctgacaccagt
gcgctggatagtgttcttgcgcaggccccgagccccgtgctcaggataatcattgacaac
atgttctaccccgtcactctggacgtcctccagcagatcttctccaagtttggaacagtc
atgaagatcatcacgttcaccaagaacaatcagttccaggccctgcttcagttcagcgaa
ccagtcaacgcccagcaagccaggctgtccctggacggccagaacatctacaactcatgc
tgcacactgcggatcgacttctccaaactggtcaacctcaatgtcaagtacaacaacgac
aagagccgcgactacacccggcccgagctgcccgctggcgatggccagccctccctagac
cctgccatggctgccgccctcaacaaggactcctccctgcttggtaccccctcaggaatg
gtagctccctactctagcggtggagggtttcagtcttctctttcctactcgcagggcgga
ggagccatcagtcctctgagtgctgcggccgcagcggcggctgctgcggggagggtggcg
ctctccggacactctggctgcagcggcgtgctcctggtcagcaacctcaacgaagagatg
gttacgccccaaagtctgtttaccctcttcggggtgtacggtgatgctcagcgcgtgaag
atcctctacaataagaaggacagtgctctcatccagatgtcggacgggaaccaggcccag
ctcgcaatgagccacctgaacggccagaagatgtacgggaagataatccgtgtgacgctc
tccaagcaccagactgtgcagctgcccagggaagggctggatgaccagggcctaaccaag
gacttcaccaactcccccctgcaccgcttcaaaaagccaggctccaagaactttcagaac
atcttccctccgtccgccacgctccacctctccaatgtcccggaggacgtgactgaggag
gatctgagacagctgttctctaacgcaggtggcactgtgaaggcattcaagtttttccaa
ggccacaaaatggcgctactccagatgtctacagtcgaggaggccatccaggccttgatg
gacctccacaactacgacatgggcagcaaccaccacctgaaggtctccttctccaagtca
accatctag
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