Oncorhynchus mykiss (rainbow trout): 110530211
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Entry
110530211 CDS
T07259
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110530211 (chd7)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110530211 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
110530211
NCBI-ProteinID:
XP_036841661
Ensembl:
ENSOMYG00000003013
LinkDB
All DBs
Position
8:complement(57224058..57305576)
Genome browser
AA seq
3210 aa
AA seq
DB search
MADPGMLSLFGDDANLFSDGLEGLGDCGFPQGQPNPMGQQMSHEHQGYGSLSSNSLHHPS
QAVPGQPKMGHPYDPFAGYEQQQGRMLGNGPAVNGMASPHSRYHNNPQQPGGGHHVYSGT
QGDGRGQPFPDGGAVWGPQAGPGQGLPPFQQQQAATQAPSHQQHGPSGPQGHGHQMGPYM
GRADYATMQGHSGQTQTPPRINHFPQGMGQEPSHYMGHVGLQQNPSMTGPPMRHPAQQQQ
PPQQHPQPPAQQFLHRPSQEPMASHTPRFPHSPSRQQQVLAGRPHQNMGFNMHGQAAPPG
AVTSSGQYPPYSQYGNLNQGLAGSAGMSPVMSLSSTSNNSNAMGPAQVQRYPNVGGPPQR
YTGPQVHQQPVHPNQITGQPMHPSQPMHPSQAQATPQQQPHLPTPPQGSYGSPPSMSPMR
GMGTPGGTPPPQQGRPPSAGLAPEVGGYPGVPLQPPNPMAPPQRNPTPMGAQQPHPHLQH
HTQHPSHPQQHPHMPPGQQLYPGMPPNQRVPLGQVRPPGPMAHGEPTGPQDQRLLPLQQQ
APRPGQQLQPPPIAFQQLQQVHPAQAALPPSQAQTHLAGPHHQNSPPNQPPWAPPPHQSP
PTPQKVPHIQHSPSDPSSVTTASDRTSASGANLQPAYRDQQPTDTEQKPKKKKKKKANVI
EKGGEGEKGGEGEKKQKKKKKKKGVMEEGDEERKPDVGGSCGAEVDPLTGALEESPAADK
KTKKKPKDKEPKEPKPPKTPKMPKTPKEPKEKKARSTTPKAKMPKKHSTKKVEAAEGSGS
SVKETKRKREPSVSVNSDVEKSPPPPSDEEDDDGVQKRRSSRQVKRKRYTEELEFRISDE
DHDGDSPAPKSPSNNSEQQEVVETEGPVVEKIMAMRMGKKEVESGEEMEVEEFYVKFKSF
SYLHCRWADLEELEKDKRIHQKVKRFRAKQALATFVTEMDDEPFNPDYVEVDRVLDESES
TDENGEPVNLYLVKWCSLPYEDSTWELKADIDLAKIEEYEAVSARQPETKRVERPPTDGW
QKSESSRDYKNDNALREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLK
GIHGPFLVIAPLSTIPNWEREFRTWTELNVIVYHGSQASRKTIQAYEMNYRDAQGRVIKG
AYKFHAVITTFEMILTDCPELRSVPWRCVVIDEAHRLKNRNCKLLEGLKMMDMEHKVLLT
GTPLQNTVEELFSLLNFLEPERFPSENTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKED
VEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGGPGGGGGAWGGGGAQVPNLLN
TMMELRKCCNHPYLINGAEEKILEDFRENHHAEMAQFHLQAMIQAAGKLVLIDKLLPKLK
AGGHRVLVFSQMVRCLDILEDYLIQKRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFL
LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYERE
MFDKASLKLGLDKAVLQSMSGRENAANGVQQLSKKEVEDLLRKGAYGALMDEEDEGSKFC
EEDIDQILQRRTQTITIESEGKGSTFAKASFVAAGNRTDISLEDPDFWQKWAKKAELDMD
AINGRNTLVIDTPRVRKQTRHYSSMKEDELAEFSELESDGENEKPLTKPRRPQDRAQGYP
RSECFRVEKNLLVYGWGRWGDILSHGRFKRPLREQDVETICRALLAYCLLHYRGDENIKS
FIWDLITPTEDGQSRTLTNHSGLSTPVPRGRKGKKGKPAPPAPPQLPRAEWLASCNPDLL
LQEDSYKRHLKHHCNKVLLRVRMLYYLRQEVIGDQADRILEGTDSSEMDIWIPQPFHAEV
PADWWDSESDKSLLIGVFKHGYEKYNSVRADPALCFLERVGMPDAKAIAAEQRGADMMAD
GPEGEDEDPEYKPLRMPFKDEMDDFTNSPLDDKEEAMDVESGESKPGENGAGSRGAGRLY
WPAASALTARLRRLITAYQRTHKREQLRQEAMARPDGRRRRRPREQLLSMVTDGGGAYVH
EGGAFMAEGSPYMAKGGAFIPEATALLAEGGAFFKERRQRWTRREEADFYRVVSTFGVIY
DTARQRFDWTQFRAFARLDKKTDESLEKYYFSFVAMCKRVCRMQVKTDTELPDPTLIIDP
ITEERASRTLYRIELLRRIREQVLPHPLLGERLRLCQPSSDLPEWWDCGRHDRDLLLGAS
KHGVSRTDYHILNDPALGFLEAHRKFTKGGSAGAPQPPRDGAPSTASEQAAAEKPSHVKE
DVESKEVKEEGDNDLPCTKADKPDEQEGKEDEMEGEKEEKAASPKKELKDEKAKEEGNDL
KDEEDQELKEEKMEVNGDSDGESSKEAGPEKEDTPNEDVGDQDKNPEFQEKPESSKASEE
QETKKEKEGSPAKSPKSPNPVAEKGLEEEDEEKMEEDDKSEKSSQAEVGATSEQKNFDEE
SNASLSTTARDETRDGFCPEDGEPSAIQRTFSFSFWPKDRVMINRMDNICEAVIKGKWPA
NRRQFFDIPGLLPGYPGPVASESPLQRRGLAELSMVAAAQTSFSGSEDLTLSPQVNEDAL
SMSLPKQRRRRRRKVEIEAERAAKRRNLMDMVAQLRESHQPESQSQAMDLTKGMHHHKAA
SSLAGYSSSSMVPSATLKAQMELLQAATPSRHRANGSLADADLPTRRRRGRRKNVEGLEL
LFINNKRGATVHSMEDSEGTKASVEGVQMPPRSYRHNIPSPSASARVPSVSAMEDGDPGT
PSDKDLRDWLRQHPTYTMDMPTAYTPKSEELLLSSQFPKPKQKRHRCRNPNKIDINTLTG
EERVPVVNRRNGRKMGGAMAPPMKELPRWLLENPEFAIAPDWTDIVKQSGFLPEAMFDRL
LTGPVVREEGVRRRGRRPKSEIAKATAAAAAAQAQAASSGGLNPLLMNGLFGGMDLTSLQ
GLQSFQSLQLQLMGFPGMGGSDSKHASAMLPLMLPGMAGMGGLPNMFGLGGLFGNNLAAA
AASAAATPATASNGTNDEGDSDETSKRDDGEGGEEGDEDKEKDTGLEAESSEANRDAAAL
NAAAAAMAASGMSASSLAFNPFLLSTMAPGLFSPYMFLPPGLGGLTMPGFPPTTLADLQS
AMAGAMGAASGAQGQEKEPSQAGPAPDRPAASTADPETADDSDSAESLEKTAESSALEDE
ASALAEEADSPQDVAAEDEEEGEDAPEKSD
NT seq
9633 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccagggatgttgagcctgttcggggacgacgccaacctgttctcggacggg
ctggagggcctgggggactgtggcttcccccagggccagcccaaccccatggggcagcag
atgtcccacgagcaccagggctacggttcgctctcctccaactccctccaccacccctcg
caggccgttcccggacagccaaagatgggccacccatacgaccccttcgcgggctacgag
cagcagcagggccggatgttgggcaacgggcccgccgtcaacggcatggcgtccccacat
tcgcgctaccacaacaatccccaacaacctggaggggggcaccacgtctattccgggacg
cagggtgacgggcgcggccagccattccctgatggaggagccgtgtggggcccccaggct
ggccccgggcagggactgcctccattccagcagcaacaggccgccacccaggccccctcc
caccaacaacacggcccctcagggccccagggccacggccaccagatgggtccctacatg
ggccgagccgactatgcgaccatgcagggccactctggtcagacccagacgccccctagg
atcaaccactttccccaaggtatgggccaggagcccagccactacatgggccatgtgggg
ctccagcagaaccctagtatgacaggtccccccatgcgccacccagcccaacaacagcag
cctccacagcagcacccgcaaccgcctgcccagcagttcctccaccggcccagccaggaa
cccatggcctcccacacccctcgcttcccccacagcccctctcgccagcagcaggtcctg
gccgggaggccccaccagaacatggggttcaacatgcacggccaggcagccccccctggt
gctgtaaccagctcagggcaataccccccctactcccagtacggcaaccttaatcaggga
ttagccggcagtgcagggatgagtcccgtcatgagcctcagcagcaccagcaacaacagt
aacgccatggggccagcccaggtccagcgctaccccaacgtaggtggacccccacagcgc
tacacgggcccccaggtacaccagcagcctgtccaccccaaccaaatcactggacagccc
atgcacccttcccagcccatgcacccctctcaggcccaggccaccccccaacagcagccc
cacctccccacaccacctcagggatcctacggctctcccccctccatgtccccaatgagg
ggcatgggaacccctgggggcacacctccgcctcaacagggccgccccccgagtgccggc
ctggctccagaggtagggggctacccaggagtcccactccagccccctaaccccatggcc
ccccctcagagaaaccccactcccatgggtgctcagcagccacacccccacctgcaacac
cacactcagcacccttcccacccgcagcagcacccccacatgcccccgggccagcagctc
taccccggcatgccccctaaccagcgagtcccactcggccaggtgagacctccaggtccc
atggcccacggtgagcctaccggaccccaggatcagcggctgctccctctccagcaacag
gctcccagacctgggcagcagctgcagcctcctcccatagccttccagcagctgcagcag
gtgcaccccgcccaggctgctttgcccccgtcgcaggcccagacgcacctggccggcccc
caccaccagaactctccacccaaccagccaccctgggcgccaccgccacaccagtcgcct
ccaaccccccagaaagtgcctcacattcagcattccccttcagatccatcatccgtgacg
acagcttccgacaggacatccgcctctggggcgaacctccagccagcctaccgtgaccag
cagcccacggacacagagcagaagccaaaaaagaagaagaagaagaaagccaacgtgatt
gagaagggtggagagggggagaagggtggcgagggggagaagaagcagaagaagaagaag
aagaagaaaggagttatggaggaaggtgacgaggagaggaagccggacgtcgggggcagc
tgcggggctgaggttgaccctctgacaggcgccctggaggaatcgccggcggcggataag
aagaccaagaagaaaccaaaggacaaggagcctaaagaacccaagccacccaagactccg
aaaatgcccaagacccccaaagagcccaaggagaagaaggccaggagcaccacccctaag
gccaagatgcccaagaagcacagcactaagaaggtggaggcagcagagggcagtggcagc
agtgtgaaggagaccaagaggaagagagaaccgtcagtgtcggtcaactccgatgtggag
aagtcacccccacctccctctgatgaggaggatgacgacggtgtccagaagcgtcgctcc
agtcgtcaggtgaagagaaagcgctacaccgaggaactggaattcaggatctcggatgaa
gaccatgatggagactccccggctcccaagtccccctccaacaactctgaacagcaggag
gtggtggagacggaggggcctgtggtggagaagatcatggccatgcgcatggggaagaaa
gaggtggaatcgggagaggaaatggaagtagaagaattctatgtgaagttcaagagtttc
tcctacctgcactgtcgctgggcagacctggaggagctggagaaggacaaaaggatccac
cagaaggtcaagcggttcagggccaagcaggccctcgccaccttcgtaacagagatggat
gatgagcctttcaacccggactatgttgaggtggaccgggtcctggacgagtcggagagc
acagatgagaacggcgagcctgttaacctgtacctggtgaagtggtgctccctgccctat
gaggacagcacgtgggagctgaaggccgacatcgacctggccaagatcgaggagtacgag
gccgtctcggcccgccagcccgagacaaagcgcgtggagcgacctcccactgacggctgg
cagaaatccgagagttccagggattataaaaacgacaacgcactcagggaataccagctg
gagggagtgaactggctgctcttcaactggtacaatacacggaactgcatcctagcagat
gaaatgggcctgggcaagaccatccagtccatcacattcctctatgagatctacctgaag
gggatccacgggcccttcctggtcatcgcccccctctccaccattccaaactgggaaagg
gagttccgcacctggaccgaactcaacgtcatcgtctaccatggcagccaggccagccgc
aagaccatccaggcctatgagatgaactaccgtgacgcgcagggtcgtgtgataaaggga
gcgtacaaatttcatgcagtcatcaccacgtttgagatgatcctgacggactgcccggag
ctgcgcagcgtcccgtggcgctgtgtggtcatcgacgaagctcaccgcctcaaaaacagg
aactgcaaactgctcgagggactcaagatgatggacatggagcacaaggtgctgctgacc
ggaacgcccttgcagaacactgtggaggagctcttcagtctgctcaacttcctggagcct
gaacgcttcccctcagagaacaccttcatgcaggagtttggcgacctcaagactgaggag
caggtccagaagctgcaggccatcctgaagcccatgatgctgcgacgtctcaaggaggat
gtggagaagaacctggcccccaaggaggagaccatcatcgaggtggagctgaccaacatc
cagaagaagtactaccgggccattctggagaagaacttctcctttctgtctaaaggggga
ccgggaggtggtggtggtgcatggggaggcggaggggctcaggtccccaacctgctcaac
accatgatggagctgaggaagtgctgcaaccacccctacctcatcaatggtgcagaggag
aagatcctggaggacttccgcgagaaccaccacgccgagatggcccagttccacctgcag
gccatgatccaggcggcgggcaagctggtgctgatcgacaagctgctgcccaagctgaag
gccgggggacacagggtcctcgtcttctcccagatggtgcgctgcctggacatcttggag
gactacctcatccagaaacggtacccgtacgagcgtatcgatggccgcgtgaggggtaac
ctccggcaggctgcgatcgaccgcttctctcgaccggactccgaccgctttgtcttcctg
ctgtgtacccgggccgggggcctgggcatcaacctgactgctgcagacacctgcatcatc
tttgactcggactggaacccccagaatgacttacaggcccaagccagatgccacaggatt
ggccagagcaaggcagtgaagatctacagactgatcactaggaactcctatgagagggag
atgtttgacaaggccagcctcaagctgggccttgacaaggctgtgctgcaatccatgagt
ggccgagagaacgcagccaacggggtgcagcagctgtctaagaaggaagtggaggacctc
ctccgcaaaggagcttacggagctctgatggacgaggaggacgagggctcgaagttttgc
gaggaagacattgaccagatcctccagagacgaacccagaccatcaccattgagtccgag
ggcaaggggtccaccttcgccaaggcgagcttcgtggccgctgggaacaggacggacatt
tccctggaggacccagacttctggcagaagtgggccaagaaggcggagctcgacatggat
gctatcaatggacggaacaccctggtgattgatacgccgagggtacggaagcagacacgc
cactacagctcaatgaaggaggacgagttggcagagttctccgagctggagagtgacggc
gagaacgagaagcccttgactaaacccaggcggccacaggaccgagcccaagggtacccc
cgcagcgagtgctttagggtggagaagaacctcctggtttatgggtggggtcgctgggga
gacatcctgtcccacgggcgtttcaagcggcccctgcgggagcaagatgtggagaccatc
tgccgcgccctgctggcctactgcctgctgcactaccgtggcgacgagaacatcaagagc
ttcatctgggacctcatcacgcccaccgaggacggacagagccgcacgctcactaaccat
tccggtctgtctactccagtaccacggggtcgtaagggcaagaaagggaaaccagcccca
cctgcccctccccagctccccagggcagagtggctggccagctgtaaccctgacctgcta
ctgcaggaggacagctacaaaagacacctcaaacaccactgtaataaagttctcctgagg
gtccgtatgctctactatctgcgacaggaagtcatcggtgaccaagccgaccggatccta
gagggaacagactcaagtgaaatggatatctggatccctcagcctttccacgccgaggtc
cctgccgattggtgggacagcgagtcggacaaatcgctcctcatcggcgtcttcaaacac
ggctatgagaagtataactcggtgcgcgccgaccctgcactgtgtttcttggagcgggtg
ggcatgcctgacgccaaggccatcgctgcagagcagaggggggcggacatgatggcagat
ggtccggagggagaggatgaggacccagagtacaagcctctccgcatgccctttaaagat
gagatggatgacttcactaactctccccttgatgacaaagaggaagctatggacgttgag
agtggtgaatctaaaccaggtgagaatggagcaggcagcagaggggcgggtcgtctgtac
tggccggcagcttcggccctcaccgctagactccgccgcctcatcactgcctaccagcgg
acgcacaaacgtgagcagctccgccaggaggccatggcccggcccgacggccgccgccgc
cgccggccccgagaacagctactctccatggtcacagatggtggaggggcctacgtgcat
gagggcggagccttcatggcagagggcagtccttatatggccaagggcggagcattcatt
cccgaggcgacggctctcctggcggaaggaggggccttcttcaaagagaggcgtcaaagg
tggaccaggcgtgaggaagccgacttttaccgcgtggtgtccacgtttggcgtgatctat
gacacggcccgtcagcgctttgactggacccagttcagggccttcgcccgtctggacaag
aagactgacgagagcctagagaaatactacttctccttcgtggccatgtgcaaacgggtg
tgtcgcatgcaggtcaagaccgacacagagctcccagaccccaccctgatcattgacccc
atcacggaggaacgggcatcacgcaccctttaccgcatcgagctgctgcgccgcatccgc
gagcaggtgttgccccaccccctgctgggcgagcgcttgcgcctctgccagcccagctct
gacctgccggagtggtgggactgcggcaggcacgaccgcgacctcctcctgggcgcctcc
aagcacggcgtgagccgtaccgactaccacatcctcaacgacccagccttgggcttcctt
gaggcccacaggaagttcaccaaggggggatcggctggggcgcctcagccgccccgcgat
ggagctccctctactgcctctgagcaggctgctgctgagaaaccctctcatgtcaaagag
gatgtggaaagcaaggaggtgaaagaggaaggtgacaacgaccttccatgtactaaagct
gataaaccagacgagcaggaaggcaaggaagacgagatggagggagagaaggaagagaag
gctgcgtctcccaagaaggagttgaaggacgagaaggctaaggaggagggaaatgaccta
aaagacgaggaagaccaagaactgaaggaggagaaaatggaggtcaacggtgattctgac
ggagagtcttccaaggaggccggacctgagaaagaagacactcccaatgaggacgtcggg
gaccaggacaagaatccagaatttcaggaaaaaccggagtcttccaaagcatcggaagaa
caggaaaccaagaaggagaaagaagggagtccagccaagtctcccaaatctcccaatcca
gtggctgagaaaggcctcgaagaggaggatgaggagaagatggaggaagacgacaagtct
gagaagtcgtctcaagctgaagttggtgccacctctgagcagaagaactttgacgaggag
agcaatgcctcactgagcaccacggccagagacgagacccgtgatgggttctgccccgag
gatggagaaccctcagccatccagagaaccttctccttctctttctggccaaaggatcgc
gtaatgatcaaccgcatggacaacatctgcgaggcggtcatcaagggcaagtggcccgcc
aaccgtcgtcagttcttcgacatcccgggcctgttgcctggataccctggccccgtggcg
tcagaaagccccctgcagaggcggggcctggccgagctgtcaatggtggcggctgctcag
acgagcttcagcggcagcgaggacctcaccctctcgccacaggttaacgaggatgctctg
agcatgtcgttgccaaagcagcgtcgtcgcaggcggaggaaggtggagattgaggcggag
cgcgccgccaaacgaaggaacctgatggatatggtggctcagctcagagagtctcaccaa
cctgagtcccagagccaggccatggacctcaccaagggcatgcatcaccacaaggcagcg
tcgtccctggcgggctactccagtagcagcatggtgccttctgctaccctcaaggctcag
atggagctgctacaggcggccacgccttccagacatagggccaatggctcattggccgat
gctgacctgcccacccggaggagacgaggccgcaggaaaaatgtggaggggctagagctg
ctgtttatcaacaacaagagaggagccacggtacacagcatggaggattccgaggggacc
aaagcgtcagtggagggggtgcagatgcccccgcgctcctaccgccacaacattcccagt
cccagcgcctccgcccgcgtcccctctgtcagcgctatggaggacggggaccctggtacc
ccctctgacaaggacctgagggactggctcagacagcaccccacgtacacaatggacatg
cctactgcatacacaccaaagagtgaggaattgctcctctcctcccagttccccaaaccc
aagcagaagcggcaccgctgccgcaaccccaacaagatcgacatcaacactctcaccgga
gaagagagggttcccgtggtcaaccggagaaacggcagaaagatgggtggagccatggcg
ccgcccatgaaggaactgccccgatggctcctggagaacccagagtttgccatcgctcct
gactggaccgacattgtcaagcaatcgggcttcctccctgaggccatgtttgaccgtctc
ctgactgggcccgtggttcgcgaggagggcgtccgtcgtcgggggagacgccccaaatcg
gagatcgccaaagcgacggcggctgctgcggcagctcaggcccaggctgcatcatccggg
ggcctaaaccctctgctgatgaatggcctgtttggaggcatggacctcaccagcttgcag
ggcctacagagcttccagagtcttcagctacagctcatgggcttccccggcatggggggg
tctgactctaaacacgcctcagccatgctgcctctcatgctgccaggtatggctggtatg
ggcggcctgccaaacatgtttggcctgggaggcctgttcggaaataacctggccgctgca
gctgcctcggctgcagccacgcccgctacagcctccaacggcaccaatgacgagggcgat
tcggacgagacgtcaaagagagacgacggggagggcggagaagagggggatgaggacaag
gagaaggacactgggttggaggcggagtcgagtgaggctaacagggacgccgcggctctg
aacgcagccgctgccgcaatggccgcctccggaatgtcggccagctcccttgccttcaac
cccttcctgctgtccaccatggcccctgggctcttttccccctacatgttcctgccccct
ggcctgggaggtctcactatgcctggctttccccccaccaccctggctgacctgcagagc
gccatggctggagccatgggggctgcttctggagcgcagggccaggagaaggagcccagc
caggctggccccgccccggaccgccctgccgcatctaccgcagacccagagacagccgac
gacagtgactcagcagagagcctggagaagacggccgagtcgtctgccctagaagacgag
gcctccgcattggctgaggaagctgactcgccgcaagacgtagcggccgaggatgaggag
gaaggagaggatgcccctgagaagagtgactga
DBGET
integrated database retrieval system
