Oncorhynchus mykiss (rainbow trout): 110530242
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Entry
110530242 CDS
T07259
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144
Endocytosis
omy04517
IgSF CAM signaling
omy04520
Adherens junction
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110530242
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110530242
09144 Cellular community - eukaryotes
04520 Adherens junction
110530242
04530 Tight junction
110530242
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omy01009
]
110530242
Protein phosphatases and associated proteins [BR:
omy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110530242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
110530242
NCBI-ProteinID:
XP_021468817
Ensembl:
ENSOMYG00000010567
LinkDB
All DBs
Position
8:complement(59416408..59668443)
Genome browser
AA seq
1379 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKVHTLIQQAVMRYKKAIAKDASYWLQVHRLEHGDGGILD
LDDLLSDVADDKDRLVAVYDEQDPHHGGDGTSASSTGTQSPDLFATELNSSNMSAFQPYQ
AASEIEVTPSALRSNMPLHVRRSSDPALATINGPFSEPRVTLPPEKPSRKNPTRWSTTAG
FLKPRRSVGGTGTGTNSLERKGNGPDTYRSLPRDAGTCANQREFQRETARSSLSANHPMV
DRWLGRREQDEEEENSRIEPIGRADSCMDHTPLRSLDDIVKLVEVSNDGGPLGIHVVPFS
ARDRRTLGLLVKRLERGGKAQEQGLFQENDCIVRINNGDLRNIHFEQAQNMFRQAMRSPV
IMFHVVPNLMKAQYEQLSHSERNPNVAYSSGRFSPDSLASERGSTTSGLDHTPQSRGHHP
HPHPEQGDAYTPLPHPHGGSIGKPPSGHAPSPHRVLNSTPTAGFTKKVGRRLNIQLKKGP
EGLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVNGVDLVGRTQEEVV
ALLRATPMGGAVGLVVLRQEETFLNAEPQMQSPRDLKVEEDDLVLTPDGTREFLTFEIPL
SDSGSAGLGVSVKGNRSKENHADLGIFVKSIINGGAACKDRRLRVNDQLIAVNGESLIGK
TNQEAMETLRKSMSVEGNKRGTIQLIVARRVTKRSELEAPGNTLGPEQTLLNSSLLDDRE
RRISHSLYGGIEGLDDNLMPQQTLMGRMMGNYQLSPTVNMPQDDTVIIEDDRPPVLPAHL
SDQSSSSSHDDMGFHVEVPPTWAKDTPIQNESTLSPDDNDPDGAFQREGFGRQSMSEKRT
KQFGDASQLEIIKTRKSKSMDLVADEINLTPRKENTPGSSTRDVGPSLGLKKSSSLESLQ
TAVAEVTLNGDMPFHRPRPRIIRGRGCNESFRAAIDKSYDRPAATEEDDEGMETLEEDTE
ESSRSGRDSVSTVADLTPLPNTERSLANGNRANEDKKKDKGGKDKKKPDRDKEKDSKNRA
KKGMLKGLGDMFRFGKHRKDGEKLERKGRLEELQASEEETLRMKLEQERIQAKTRELRER
QARERDYAEILDVNLSRDEEHPYAGIGPLDTSLDSGHSRPQSPRDNHHQDSSLYTQVGKT
RNANGRPPSADSNRLAPSNHDRIQRLRHEFQQARGDDDPDDRRRTYSFEQPWPNNTNTGP
SPYQTDGQQTGRHSVSVEVQRQRQRQEERDAFQQAQRQYSSLPRQPRKNPSSISQDSWDK
VYPPGDGFQTAKENPRYSSYKGSRNGYPGMSGVNARVLLEAQELLRQEQRRREQEAKGKQ
LLLAPPQEHPGNNTYDGYSAHKDPVSPKGPYRQDVPPSPSQLARLNKLQGPEKGRPFYS
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgttttggaaggactagggtggtggtaccgtgcggagatggaaat
atcaaagtccacactctcatccagcaagccgtcatgagatacaaaaaagccattgcaaag
gatgccagctactggttacaggtgcatcggttggagcatggggacggaggtattctagac
ctggatgacctgctgtctgatgtggctgatgacaaagaccggctggtggctgtgtatgat
gaacaggaccctcaccatggaggcgacggcaccagcgccagctccacgggaacccagagc
cccgacctgttcgccacagagctcaactccagcaacatgtccgctttccagccctaccag
gccgccagcgagatagaggtcactccgtccgcccttcgatccaatatgcccctccacgtg
cgtcgcagcagtgacccggccctggcgacgatcaacgggccgttcagcgaaccccgcgtg
accctgccgccagagaaaccgtccaggaagaaccccacccgctggtccaccacggctggc
ttcctcaaaccacggcgctctgtaggaggcaccggcactggcaccaatagcctggagaga
aagggtaatggtccggacacgtaccgtagtctcccccgggatgcaggcacgtgtgccaac
cagagagagttccagagagagacggcccgctcctccttgagcgccaaccaccccatggta
gaccgctggctggggagacgggagcaggatgaggaggaggagaacagcaggatcgagccg
attggtagagctgattcctgtatggaccacacccctctgaggtccctagatgacattgta
aagctggtagaagtctccaatgatggcgggcccttggggatccatgtagtacctttcagt
gcccgggaccgcaggactctaggcctgttggtcaagcgcctggagaggggaggcaaggcg
caggagcagggtctgttccaggagaacgactgcatcgtacgcattaataatggagacctg
cggaacatccattttgaacaagcccagaacatgttccgccaggccatgcgttccccggtc
atcatgttccacgtggttcccaacctgatgaaggcccagtacgagcagctgtcacacagc
gagaggaaccccaacgtggcctactcctctggacgcttcagccccgactccctagctagc
gagagaggcagcaccacctcaggcctggaccacaccccacagtcccgtggtcaccatccc
caccctcacccggagcagggagacgcctacacccctctaccccacccccatgggggctcc
attggcaagcccccatccggccacgccccctcccctcacagggtgctaaactcaaccccc
acggcgggcttcaccaaaaaggttggcaggagactcaacatccagctcaagaaaggtcca
gagggtctgggtttcagcatcacttcgcgcgacgtccccatcggcggctcggcgcccatc
tacgtgaagaacatcctgccccgaggagctgccatccaggacggacgcctcaaggctgga
gacaggctgctggaggtgaatggagtggacttggttggtcggacccaggaggaagtggtc
gctctgctgagggccacgcctatgggaggagctgtggggctggtggtgctacgacaggag
gagaccttcctgaatgcagagcctcagatgcaaagccccagagatttgaaggttgaggag
gatgacctggttttgacccctgacggtaccagggagttcctgacctttgagatccctctg
agtgactcggggtcggccgggttaggggtcagcgtcaagggcaaccgctccaaggagaac
catgctgacctaggcatcttcgtcaagtccataatcaatggaggagctgcctgcaaggat
agacggctgcgggtcaacgaccagctgatagcggtgaacggcgagtcattgataggcaag
accaaccaggaggccatggagacgctaaggaagtccatgtcggtggagggcaacaaacgc
gggacgattcagctgatagtggccaggagggtcaccaaacgcagtgagctggaggcccct
gggaacaccctgggaccggagcagaccctcctgaactcctccctgctggacgaccgggag
cgccgtatctcccactccctgtacggaggcatagagggcctggacgacaacctgatgcca
cagcagactctgatgggcaggatgatgggtaactaccagctctccccaacggtcaacatg
ccccaggacgacactgtcatcatcgaagacgatcggccacctgtacttcctgcccacctc
tctgaccaatcgtcttccagttcccatgatgacatggggttccatgtggaggtccctcca
acttgggccaaagatactccaattcagaatgagagcaccctgagccctgatgacaacgac
ccagacggagcctttcagagggagggtttcggcagacagagcatgtcagagaaacggaca
aagcagtttggagatgccagtcagctggaaatcatcaagacacgcaagtccaagagcatg
gatctagtagccgacgagattaacctcacccctcgcaaagagaacacaccagggtcttcc
accagggatgtgggtccctcccttggcctcaagaagtccagctctctggagagtttacag
accgccgttgccgaggtgacgctcaacggtgacatgcccttccacaggccacgcccacgc
ataatcagggggcggggctgtaacgagagcttccgggccgctattgacaagtcttacgac
aggccagcagccaccgaggaggacgacgagggcatggagacattggaggaggacaccgag
gagagctctcggtccgggcgcgactctgtgtccactgtggcagatctgaccccactgccc
aacacagagagatcgctggccaacggcaaccgcgccaatgaagacaagaagaaagacaaa
ggagggaaagacaaaaagaagccagaccgggacaaagagaaggacagcaagaacagggct
aagaaaggcatgctgaaaggactgggcgacatgttcaggtttggaaaacaccgcaaggac
ggagagaaactagagcgcaaagggaggctggaggagctgcaggcctcagaagaagagaca
ctgaggatgaaactagaacaggagaggatccaggctaagacccgggagctgcgggagcgc
caggcacgggagagggactacgctgagatcctagatgtcaacctgagccgagacgaggag
cacccctacgcaggcatcgggcccctggacacgtccctggacagcgggcacagccggccc
cagagcccccgagacaaccaccatcaagattcctccctgtacacacaagtcggcaaaacc
cgcaatgcaaatggacgccctccctccgccgacagcaacagactagcgcctagcaaccac
gaccggatacagcggctgagacacgagttccagcaggccaggggagacgacgaccctgac
gaccggagacgcacctacagcttcgagcagccctggcccaacaacaccaacacaggccca
agcccgtaccagacagacggacaacagacaggccgacactctgtgtctgtagaggtgcag
agacagagacagaggcaggaggagagagacgccttccaacaggcgcagagacagtacagc
tccctgccacggcaacccaggaagaaccccagctccatctcgcaggactcctgggacaag
gtctacccgccgggtgatggcttccagacggccaaggagaaccctcgctactctagctac
aagggctccagaaacggctacccggggatgagcggcgtgaatgcccgcgtcctcctggag
gcccaggagctgctgaggcaggagcagagacgcagggagcaggaggccaaagggaagcag
ctactgctagcgcccccgcaggaacaccccgggaacaacacctatgacgggtactcggct
cacaaggaccctgtttcgcctaagggtccctatagacaggacgtacccccctcgccctcc
cagctggccaggctcaacaagctgcaggggcccgagaagggaaggcccttctactcctga
DBGET
integrated database retrieval system
