Oncorhynchus mykiss (rainbow trout): 110530272
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Entry
110530272 CDS
T07259
Name
(RefSeq) deubiquitinating protein VCIP135
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110530272
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110530272
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110530272
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C64
110530272
Ubiquitin system [BR:
omy04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
110530272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
110530272
NCBI-ProteinID:
XP_021468869
Ensembl:
ENSOMYG00000040139
UniProt:
A0A8C7TTR6
LinkDB
All DBs
Position
8:61145742..61152933
Genome browser
AA seq
1186 aa
AA seq
DB search
MSLLQGSKKKDKRILSGTCPDPKCQARLFFPAYGSISIECTECGQRHEQNNLLNVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPILTRYGMDKQTGKAKLLR
EMNQGEMFDCSLLGDRAFLIEQEHVSTVGYGKDRSGSLIYLHDTLEEMKKANSNKECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQHFKQNLDRYKALFQDFIDAAEWEDII
NECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSASFLPGLVPEE
QCKGKDGKFNKPICIAWSSSGRNHYIPLVGIKNTLLPKLPPRLLPKAWGVPQELIKKYIK
LEQDGSCVIGGDRSLQDKYVMRLVNAMEEIFMEKHGIHPSLVADVHQYVYRRTGVIGVQP
EEVTEAARKSVMENRLHRCLICNALSELHVLPEWLAPGGKLYNLAKSTHGKLRPDKNYSF
PLNKVVCCYDPERDILIPDYKLSSLNTCNWCHGTSVRHIHGNGSVVYLDGDRTNTRSQGG
KCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYEVNVDLNSNVYDVAMKLV
TKHFPGEFGSELLVQKVVNTILHHTAKKNPDEYNPVSIDGAHAQRLTDVVETQQAVDTQP
PTKIILTGQKSKTIHKEELTVSKAERSLQQSISEQALVTQKRRTDRLKQEQKGQGRPPSP
SAAQEHSSSPATPTKSSFSPTSSKEKKIRVTTSDGRQAMLTLQAQTTFSELQRSIANEFT
MPPAQQCIRHGFPPKELFPPKDGAENEPVALQHGDRVTVEILRGPEDRKASVPSASSSYS
TLHSLLSVKSDDPVTSSRMNTSRELQDNIDLEMSSLCLLATLMGEDVWSYAKKLPHLFHQ
GGVFYNIVKKDMGLMDGKHCTLPHLTGKTFVYNAAEERLELCVDAAGHFPVGPDVEDLVK
EALVQLRSEAASRSREGSPSHSLLRLGSGGVVRKKEQLQSVNAFQGKGHSLGSAPGGSPP
EHKPITRQHSSGVDLSASASKGPDLSDISEDATKELVRMAPGFVTMKDSRHLDPSMIEEQ
RKKLQEMVSSIQASMDRHLREQSNAGAGIGGPAERTSGAKMSASQSAPGAGVKEASSMDV
STAGAHGTSVEAGNKPDGKDAGSEELEEMDSQDAEHTNALEPMDHS
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgctacagggctccaagaaaaaggacaagcgtattttgtccggtacctgccca
gacccgaaatgccaggcgaggctattcttccctgcttacggttcgattagcattgaatgc
acagagtgtggccaacgccacgaacagaataatcttttaaatgtggaagaagtaactgat
ccagacgttgtgcttcacaatttgttaagaaatgccttactcggtgtcactggtgcaccg
aaaaagggaacagagctggtgaaagtgatggggctttccaactaccattgcaagctcctt
tctcctattctcacaaggtatggaatggataagcagacgggaaaagcgaaactgctgcgg
gaaatgaatcaaggagaaatgttcgactgttcacttctaggagacagggcgtttctaatt
gaacaggagcatgtatctacggttggctatggcaaggacagatccgggagcctgatatac
cttcacgacactttggaggagatgaagaaagcaaacagcaacaaagaatgcctcattcct
gttcatgtggatggagatggacattgtcttgttcatgctgtgtccagggccctggtaggc
agagaactgttctggcatgccttgagagagaatttgaaacaacatttcaaacaaaacttg
gatcgctacaaggcactctttcaggattttattgatgcagccgaatgggaggacatcatc
aacgaatgtgaccccctgtttatcccaccggagggtgtgccactgggacttcggaacatt
cacatattcggcttggccaatgtgttgcaccgccccataatcttgttagattcactgagt
ggaatgaggagctctggggattactctgcaagttttctccctgggcttgtgccggaagag
cagtgcaaaggaaaagacgggaagtttaacaagcctatatgcatcgcctggagtagctca
gggcgtaaccactacatccccctcgtcgggataaagaacacccttctccccaagctgcca
ccgaggcttctccccaaggcatggggagtgccacaggagctcatcaagaagtatataaag
ctggaacaagatgggagctgtgtcatcgggggagacaggagcttacaagacaagtatgtg
atgagactggtcaatgccatggaggagatcttcatggagaaacatggaatccacccctcc
ctggtggcagacgtgcatcagtacgtttacagacggaccggtgtgatcggcgtccaaccc
gaagaggtgacggaggctgccaggaaatcagtcatggaaaaccggctacatcgctgtctg
atctgcaatgcactctctgagcttcatgttctacctgagtggctggctccaggtggtaag
ctctacaacctggctaaatccacccacgggaagctcagacctgacaagaactacagcttc
ccgctgaacaaggttgtctgctgttacgaccctgagagggacatcctcattcctgactac
aagctgagctctttgaacacatgcaactggtgccacggcacctccgtgcgccacatccat
ggcaacggctctgtggtgtatctggatggagacagaacaaacacccgctcccaggggggc
aaatgtggctgtggctttaagcactactgggagggaaaggaatacgacaatctgccagag
gctttccccatcactctggagtggggtgggcgggtcgtgcgggagactgtgtactggttc
cagtatgaggttaatgtggacctgaacagcaacgtgtatgatgtcgccatgaaactggtc
accaagcatttccctggggagtttggcagtgagctcctagtgcagaaagtggtgaacacc
attttacatcacactgccaagaagaacccagacgagtataacccagtctccattgacggg
gcgcatgctcagaggctcacagacgtggtggaaactcagcaggctgttgacacacagcca
ccgactaagatcatactaactgggcagaaatcaaagaccattcacaaagaggagcttaca
gtgagtaaggcagagcggagccttcagcagagcatcagcgagcaggccctagtgacccag
aagaggaggacggatcgactgaagcaggagcagaagggacagggcaggccaccctcccca
agtgctgctcaggaacattcctcctccccagccacacccaccaaatcctccttctccccc
acttccagcaaggagaagaagatccgtgtcaccactagcgacgggcggcaggccatgctc
actctacaggctcagaccaccttctctgagctccagaggagcattgctaatgagttcacc
atgcctccagctcagcaatgtatccgacatggattcccacccaaagaacttttccctccc
aaggatggagcagagaatgaaccggtggctctccaacacggggacagggtgactgtggag
atcctgagaggtccagaggaccgcaaggcatccgtcccaagtgcctccagttcctattca
actctgcattccctcctctctgtgaagagtgatgatccagtgacttccagcagaatgaat
actagcagagagctgcaggacaacattgaccttgagatgtcctccctctgtctcctagca
accttaatgggagaagatgtctggtcatatgccaaaaaactgcctcacttattccaccaa
ggtggagttttctacaacattgtgaagaaagatatgggcctgatggatggcaagcactgc
accctcccacacctgactggaaagacgtttgtttacaacgcagcagaggagcgtctggag
ctgtgtgtggatgcagcgggacactttcccgtgggccctgacgtggaggacctcgtcaag
gaggccctggtgcagctccgctctgaagctgcctccaggagtcgcgagggaagcccctct
cacagcctgctgaggctcgggagtggaggtgtggtgcgcaagaaggagcagctccaaagt
gtcaacgccttccagggtaagggccactccctgggcagcgccccaggcggctctccccct
gaacacaagcccatcaccaggcagcacagcagcggggtggacctgagcgccagcgcctcc
aagggacctgacctgtctgacatctcagaggacgcgaccaaggagttggtgcgcatggct
cccggttttgtcaccatgaaagacagccgacacctggaccctagtatgatcgaagaacag
aggaaaaaactacaggagatggtctcatccatccaggcctccatggacaggcacctgagg
gagcagagcaatgcaggggcaggcattgggggccctgcagagaggacaagtggggctaag
atgagtgcttcccaatctgccccaggggcaggcgtaaaggaggcctcttctatggacgta
tctactgctggtgctcatggcacatcagtggaggcagggaacaagcctgatggaaaggat
gcagggtcagaggagctggaggaaatggatagccaggatgcagagcataccaacgccctg
gagccaatggatcattcctga
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integrated database retrieval system
