KEGG   Oncorhynchus mykiss (rainbow trout): 110530303
Entry
110530303         CDS       T07259                                 
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510  Focal adhesion
omy04512  ECM-receptor interaction
omy04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110530303
   04518 Integrin signaling
    110530303
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110530303
SSDB
Motif
Pfam: Laminin_N EGF_laminin Laminin_B EGF_LMN_ATRN CC_Bre1 EGF_Teneurin FitA-like_RHH CCDC39
Other DBs
NCBI-GeneID: 110530303
NCBI-ProteinID: XP_021468901
Ensembl: ENSOMYG00000005695
LinkDB
Position
8:complement(62067997..62145625)
AA seq 1595 aa
MRWFIQVVFSLTCLAICSHSAMDECTDDSSRPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGVTGVTKSCHICDARDRRQHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPNSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEDGPWTPYQYYSGSCEKTYQKFNRGFIR
TGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIKVTLNR
LNTFGDEVFNDPKVLKSYYYAVSDFAVGGRCKCNGHASECVKNNGFDKPVCNCKHNTEGD
DCNVCKPFYNDRPWRRATANNPNECLECNCNGKSAECYFDPELYRATGHGGHCHNCADNT
DGPKCERCLDNHYRDRSGNRCLPCSCNSVGSLATQCDNTGRCSCKPGVMGDKCDHCQPGF
HTLTEAGCRPCSCNPSGSTQECDVQTGRCQCKDNVEGFNCDRCKLGYFNLDPQNPQGCTL
CFCFQHSSVCDSAEGYSIDTVSSTFDKDDEQWTAQQRDGSSVSVQWSAGGEEISLISEDY
FPMYFVAPERFLGNQLLSYGQNLTLNFRVDRRDTRLSAEDVVLEGAGLRVAVPLIAQGNA
YPGENMQTFVFRLHDSTDYPWRPTLPQSEFQKLLHNLTSIKIRGTYSERSAGYLDDVMLI
TARKGPGTPARWVEKCTCPQGYMGQHCENCALGYRRNRPDLGAFSSCDACNCNGHSDTCN
PDTGMCDCQHNTAGLSCERCEDGSYGDSTVGSSSDCKPCPCPGGSTCAVVPKTKEVVCTN
CPTGTTGKRCELCDDGFFGDPLGENEPVRVCRACKCSDNIDPNAVGNCDRETGECLKCIY
NTDGFFCDRCKEGFYGSPLATNPNDKCKPCSCSPYGTVDRQTSCLQVTGQCPCLAHVTNR
DCSACEPGFFNLQSGTGCVRCTCNPIGSTNGQCDISSGQCECQPGVTGLRCERCEVNFFG
FGLSGCKPCDCDPEGSSTTQCKDDGRCECSPGFVGARCDMCEENYFYNRSTLGCQQCPAC
YSLIRDKVNQQRQKLHDLQNLIDNLGSTSEAVSDKAFEDRLKQAEKAIMDLLEEAQTSKD
VDKGLLERLGNLNNTLTTQWNRLQNIRSGVDDTGTQTDKARNRVRDAENLVDRAREELDK
AKDAISKLDIKTPSNTADPNNMTLLAEEARNLADKHKMDADQIEKIAKDANDTSTKALNL
LMKTLDGEGKTNIDIDELNRKYNEAKDLANNLVKQANKVHAEAEEAGDKALKIYANLTSL
PPFNTKSLEGEASKIKKEASDLDKLIDKTEKEYNDLRDDLRGKETEVRKLLEKGKTEQQT
ADQLLARADAAKALAEEAANKGRSTYQEAQDILGNLRDFDKRVNDNKTAAENAMKRIPEI
NATIAAANEKTKQAEGALGNADADAKEAKSKAEEAEKIASLAQKGSAKTKADAEKAFEDT
RKLDGEVNNMMDQLSAAEAELAKKKAEADQDMMMASMASDNAKEAEDNARKAKSAVRTVL
STINDLLKSLGNIDKVDLSKLGLIEGSLKQAKDKMANSDLDRKLSELNDVAKSQEVMITD
YDRQIKEIQSDIANLNDIKNTLPNGCFNTPSIERA
NT seq 4788 nt   +upstreamnt  +downstreamnt
atgcgttggtttattcaagttgtgttttcattgacctgtttggctatatgtagccacagt
gctatggatgaatgcactgatgattcgagtcggcctcagcgatgcatgccagagtttgtc
aacgctgctttcaatgtcactgtggtagctaccaatacttgtggctctcccccagaagaa
tactgtgtacaaaccggcgttacgggggtcaccaagtcgtgccacatctgcgatgccagg
gatcggagacaacatcacagtgctgtgtacctcaccgattacaacaatcaacaggacacc
acctggtggcaaagtcagactatgttagcgggcatccagtatccaaactcaatcaatcta
actcttcatcttggcaaggcgtttgacatcacttacgtgcgactcaagttccacaccagc
cgcccagagagcttcgccatctacaagcgcacaagtgaggatggaccatggacgccctac
cagtactacagtggctcctgtgagaagacctaccagaagttcaacagaggcttcatccgc
accggagaggacgaacagcaggccctctgcacagacgagttcagtgacatctcacccttg
accggaggaaacgtggccttctccaccctcgagggccgacccagtgcttacaactttgac
aacagcccagttcttcaggaatgggtgacagccacagatatcaaagtgaccctgaacagg
ctcaacacatttggagatgaagtgttcaatgatcccaaggtcctaaagtcctattactac
gctgtctcagactttgcagtgggaggaaggtgcaagtgcaacggccatgcgagtgagtgt
gtgaaaaacaacggcttcgacaagccggtttgcaactgcaagcacaacacagagggtgat
gactgcaatgtgtgcaagccgttctacaacgaccgtccctggaggcgagctacagccaat
aaccctaacgagtgtctggagtgcaactgtaatggcaagagtgcagagtgctacttcgac
cctgagctgtaccgtgccaccggccacggtggacactgtcacaactgtgccgacaacact
gacgggcctaaatgcgagcgctgcctggacaatcactacagagaccgatctggcaaccgc
tgcctgccctgcagctgcaactcagtgggctctctggccactcagtgtgacaacacaggg
cgctgcagctgtaaaccaggtgtgatgggggacaagtgtgaccactgccaacctggcttc
cacaccttgaccgaagcaggctgcagaccctgctcctgtaacccttctggaagcacacag
gagtgtgatgtccagacaggccgttgccagtgcaaggacaacgtggagggcttcaactgt
gacaggtgtaagctgggctacttcaacctggacccccagaacccgcagggttgcactctg
tgcttctgcttccaacactcctctgtgtgtgacagcgctgaaggttacagcatcgacact
gtttcctccaccttcgacaaagatgatgagcagtggacagcccagcagcgtgacggctcc
agtgtttcagtccagtggtctgctggtggagaggagatttccctcatctctgaggactac
ttccccatgtactttgtggctccagagaggttcctgggcaatcagctgctgagctacggc
cagaacctcaccctgaacttccgggtggacaggagagacacacgcctttcagctgaagat
gtggttctggagggggctggcctcagagtggctgtgcctctcattgctcagggaaatgcc
tatcctggggagaacatgcagacatttgtgttcaggctccacgacagcacagactacccc
tggaggcccaccctccctcagtctgagttccagaagctcctacacaatctgacatccatc
aagatccgtggcacctacagcgagagaagtgctggctaccttgacgatgtaatgctgatc
acggcgaggaaaggtcccgggaccccggcccgctgggtagagaagtgtacctgccctcag
ggctacatgggacagcattgtgagaactgcgccctgggatacaggaggaacagaccagac
ctgggggccttcagttcctgtgacgcctgcaactgtaacggacacagtgacacgtgcaac
cccgacacagggatgtgtgactgccaacacaacacagctggtctcagttgtgagaggtgt
gaagacggttcctatggagactccactgtggggagttccagcgactgcaagccctgcccc
tgccccggaggatccacttgtgctgtcgttcccaagaccaaggaggttgtctgcaccaac
tgtcccacaggaaccacaggcaagcgctgtgagctgtgtgacgacggtttcttcggagac
cccctgggtgagaacgagccggtgagggtgtgtcgggcctgtaagtgtagcgacaacatc
gaccccaacgctgtgggcaactgtgaccgagagaccggggagtgcctcaagtgtatctac
aacacagatggcttcttctgcgatcgctgcaaagagggcttctatggaagccctctggcc
accaaccccaacgacaagtgcaaaccctgctcctgctctccgtacggcacagtggacaga
caaaccagctgtctacaggtcacaggccagtgcccgtgtctcgcccacgtcaccaacagg
gactgcagcgcctgtgagcctggcttcttcaacctgcagagcggaacaggttgcgtacga
tgcacctgcaatcctattgggtccaccaatggtcagtgtgacatcagctccggtcagtgt
gaatgccagcccggcgtcaccggtctgcgctgtgaacgctgcgaggtcaacttctttgga
ttcggattgtctggctgcaaaccgtgcgactgcgacccagagggctcctccacgacccag
tgtaaggacgatggccgctgcgagtgcagcccaggctttgtaggagccaggtgtgacatg
tgtgaggagaactacttctacaaccgctctactcttggctgccagcagtgtccagcttgt
tactctctcatcagagacaaggtgaaccagcagagacagaagctgcatgacctgcagaat
ttgattgacaacctgggctctacgtcggaggctgtcagtgacaaggcctttgaggaccgt
ctaaagcaggcagagaaagccatcatggacctgctggaggaggctcagaccagcaaagat
gtagacaaaggcctgctggagcgcctgggaaacctgaacaacacgctgaccactcagtgg
aaccgtctgcagaacatcaggagcggtgtggacgacacgggaacccagaccgacaaggcc
cgcaaccgggtccgagacgctgagaacctggtcgaccgtgcccgcgaggaactggataag
gccaaggacgccatcagcaaactggacatcaaaacaccctcaaacaccgcagatcctaac
aacatgacgcttctggcagaggaggctcgcaatctggccgacaaacataaaatggatgcg
gatcaaatcgagaagattgccaaggatgccaacgacacatccaccaaggctctcaacctg
ctgatgaagactctagatggcgagggaaagaccaacattgacattgacgagctcaacagg
aagtacaatgaagcaaaggacctggctaataacctggtgaaacaggccaacaaagtgcat
gctgaggcagaggaggcaggcgacaaagccctgaagatctacgctaacctgaccagcctg
ccacccttcaacaccaaatcactggagggcgaagcgagcaagatcaagaaggaggcgtca
gacctggacaagctgattgacaagacagagaaggagtacaacgacctgagggacgacctg
agagggaaggagactgaggtccgcaagctgctggagaagggaaagactgagcagcagact
gcagatcagttgctggctcgtgctgatgctgccaaggcactggctgaggaggccgccaac
aaggggaggtccacctaccaggaggcccaagacattctgggaaatctgagagactttgac
aagagggtgaacgacaacaagacagcagctgagaacgccatgaagagaatcccagagatc
aacgccaccatcgctgcagccaatgagaagaccaagcaggctgagggggcgctaggcaac
gcagacgcagacgcaaaggaggccaagagcaaggcggaggaggctgagaagatagccagc
cttgcgcagaagggttctgctaagaccaaggcggatgcagagaaggcctttgaggacacc
aggaagctggatggagaggtcaataacatgatggaccagctaagtgcagcagaggcagag
ctggccaagaagaaggctgaggccgaccaggacatgatgatggctagcatggcatcagac
aatgcgaaggaagctgaggacaacgctcggaaagccaagagtgcagtcaggaccgttctt
agcaccatcaacgacctgcttaagtcactgggcaacattgacaaggtggacctgagcaag
ctgggcttgattgaggggtcgctgaagcaggccaaagacaagatggcgaacagcgacctg
gaccgcaagctgtcggagctgaacgacgtggccaagagccaggaagtgatgatcaccgac
tacgataggcagatcaaggagatccagtctgacatcgccaacctcaacgacatcaagaac
acgttacccaacggctgcttcaacaccccatccatagaacgggcttaa

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