Oncorhynchus mykiss (rainbow trout): 110530308
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Entry
110530308 CDS
T07259
Name
(RefSeq) astrotactin-1 isoform X1
KO
K24479
astrotactin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110530308
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
110530308
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASTN_1_2_N
Annexin_2
ASTN1_2_fn3
FXa_inhibition
fn3
TM_ErbB1
Pur_ac_phosph_N
NDNF
Motif
Other DBs
NCBI-GeneID:
110530308
NCBI-ProteinID:
XP_021468912
Ensembl:
ENSOMYG00000008482
LinkDB
All DBs
Position
8:62621245..62881609
Genome browser
AA seq
1313 aa
AA seq
DB search
MGLRLLFSLAWILAFKAANIQGLNTVEDHSQDLECKMKSVTVSALPFLRENDLSIMHSPS
ASEPKLLFSVRNDFPGEIVVVDDLENTELPFFVLEITGNSEDIPLVRWRQQWMENGTLLF
HIHHQDGSQNLPGLSATDYPASDSAEEELRILHISVMGGMIALLLSILCLVLILYTRRRW
CKRRRVPQPQKSASAEAANEIHYIPSVLMGGQARESLRNSRGQGHNSSGTLSIRETPILD
GYEYDITDLRHHLQRECMNGGEDFASQVTRTLDSLQGCNDKASMDLTPGEWSDNTKLSLM
NKYKDNIIATSPIDSNHLQQNTLLPHNTSTSQRKQRLSSKTRAGSTFLNPDGDSGTEADS
EPQLTFYTDPNRSRRRSRGMRNGNANSAWGSGAGSPRSPINKTTLTLISVVSCVIGLVYS
SHLSCGLNVRVILHVPEHLIADGSKFILLQGSQLDASDWLNPAQVLLYYQQNASGPWINE
LCGRRILDPCEHQCDPETGDCLCLDGYMKDPVHKHLCIRNEWGPNQGPWPYTIFQRGFDL
VMGEQPSDRIFRFTYTLGEGMWLPLSKSFVIPPAELAINPSAKCKTDMTVMEDAVDVREE
LMISSSFDSLEVLLDSFGPVRDCSKDNGGCSRNFRCISDRKLDSSGCVCPPGLSPMKDGT
GCYDHHIGIDCSDGFNGGCEQLCLQQLAPLEDDPTLYNIQMFCGCIEDYKRGQDGRSCQP
LSEACTEGLDCGETADVPANQTVFGDLFYGYNNHTKEIISGQILKATFRQKNFARGIEQQ
LPDGMVVASVPTDVQCHEELSDPVPDPDYLTGMVNYSEVSGYPLIQHWRLRSVLYHVKLN
QWVLSQAFSSAIHSLDGATLRHDFVSILREFGNHFVQEAVYGFEEACTIWYPNKQVQRQL
WLEYQDISKGNSPSEESEERDKEPRTLTYPAYIASLLDSGAKRMAAGVRMDCSSQGQCPY
SCHLCHMSPGPGRPAEPVLLQITKAAPLYELVSNNHTYQALQEAMMSMLWCSGKGDVIDD
WCRCDSSAFGTDGLPTCAPLPQPRLRLSHSYEPSSSLVIVEWNHTEPPIGVRIVDYLISQ
EKVTERTDHSKMETETMLSFVDDILSGAKSPCVMLGDIPDLLTSSVSMIIRCLEPDTTYM
FRLWAVDNTGRRSSPSEVTIKTPCPAVDDVKAQEIADKIYNLFNGYTSGKEQQTAYNTLM
DLGSPTLHRVLYHYNQRYESFGEFTWRCEDELGPRKAGLILSQLDDLSGWCRGLLQEPKI
GLRRMSLKYLSCRYTDTKAFGLNWVDLGQDVRKACDEQNLPVMYNDYGEPKER
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgagattgctcttctcgctcgcatggattcttgccttcaaagctgctaatatt
caaggtttgaataccgtcgaggaccattcccaagatttggaatgcaaaatgaaaagcgtc
accgtgtctgcgctgccgtttttgagagaaaacgacctgagcatcatgcatagtccgtcg
gcctccgagcccaagcttctgttctccgtcagaaatgattttccgggggaaatagtcgtc
gtggacgatctagaaaacaccgagctaccctttttcgtcctagagatcacaggaaactct
gaggacattcctctggtgcgatggcgacagcagtggatggagaatggcacactgctcttt
cacatccaccaccaagatggcagccagaacctccccggcctgtccgccacagactaccct
gccagcgactctgccgaggaagagttacgcatccttcacatctctgtcatgggaggcatg
attgccttgctgctgtccattttgtgcctggtccttatcctctacacgcgcaggcgatgg
tgcaaacgccgccgtgtgccccagccccagaagagcgccagcgccgaggcagccaatgag
attcactacatcccttcggtgctgatgggaggccaggccagggagagcctgagaaactcc
aggggccagggtcacaattccagtggcacgctcagcatccgagagacacccatcctggac
ggatacgagtatgacatcactgacctgagacaccaccttcagagagagtgcatgaacgga
ggagaggactttgccagccaggttacacgcaccctggactcccttcagggctgcaatgac
aaggccagcatggacctcacacctggggagtggagtgacaatacaaagttgtccctaatg
aacaagtacaaggacaacatcatagccaccagccccattgacagcaatcacctgcagcag
aacactctcctcccccacaacacctccaccagtcaacgcaaacaacgtctgtccagcaaa
acccgagcgggttcaaccttcttaaacccggacggggactcgggcacggaggccgacagc
gaacctcagctgaccttttacactgaccccaatcgcagcaggcgccgcagccgaggtatg
agaaatggtaacgccaacagcgcgtggggctcaggggcaggttccccacgaagccccatc
aataagaccaccctgactttgatcagcgttgtcagctgtgtgatcggcctggtgtactcc
tcacacctctcctgtggcctcaacgtccgggtcatcctccatgtgcctgagcacctcatc
gcagacgggtccaagttcattttgctgcagggcagtcaactggatgcgtctgactggctg
aacccggcccaggtgttgctatactaccagcagaatgccagcgggccttggatcaatgag
ctgtgtggccgccgcattctggacccctgtgaacaccagtgtgatccagagacaggtgac
tgtctatgcttagatggctacatgaaggaccctgtccataagcatctctgtattcgtaac
gagtggggtccaaatcaaggaccctggccttacactattttccagcgtggttttgatctg
gtgatgggagaacaaccatctgatcgcattttcaggttcacatacacattgggggaaggg
atgtggttaccattgagtaaaagctttgtcattccacctgctgagctggcaatcaaccca
tcagccaagtgcaagactgatatgactgtcatggaagatgctgtggatgtgagagaagag
ctgatgatctcctcatcgtttgacagtctggaggttttactggactcgtttggcccggtg
cgtgactgctcaaaggacaacggtggttgtagccgaaacttccgctgcatctctgaccgc
aagcttgattccagtggatgtgtgtgccctccgggactgagccctatgaaggatggcaca
ggctgctacgaccaccacattggcatcgattgttctgatggcttcaacggaggctgtgaa
caactgtgcctccaacagcttgcccccctggaggatgaccccaccctctacaacatacag
atgttctgcggctgtattgaggattacaagagaggtcaagatggtcgttcctgccagccc
ttgtctgaagcctgtactgagggactggactgtggggaaacagctgacgtcccagccaac
caaaccgttttcggggacctcttctatggctacaacaaccataccaaagaaatcatctct
ggtcagatcctcaaagctaccttcaggcagaagaactttgcccgaggcatcgagcagcag
ctcccagatggcatggtggtggcatcagtgccaaccgacgtgcagtgccacgaagagctg
tcggacccagtccctgatccagactatctcacaggaatggtgaactacagtgaggtctct
gggtacccactcatccagcattggaggcttaggtctgtcctgtaccatgtcaaactgaac
cagtgggttctctctcaagctttcagctctgccatccactccctggatggtgccaccctc
cgccatgattttgtctccatcctcagggagtttggtaatcactttgtacaagaggctgtg
tatggcttcgaggaggcctgcactatctggtaccccaacaagcaggtccagagacagctg
tggctggagtaccaggacatcagcaaagggaattccccatcagaagagtcagaggagcgc
gacaaggagccccggaccctgacctacccagcgtacatcgccagcctgctggactctggt
gccaagcgcatggcggcgggggttcgcatggactgcagcagccagggccagtgtccgtac
tcctgccacctctgccacatgagccctgggcctgggcgtccagccgagcctgtcctgctc
cagatcactaaggccgccccgctctacgagctggtctccaacaaccacacctaccaggca
ctgcaggaggccatgatgagcatgctgtggtgttctgggaaaggtgacgtaatcgatgac
tggtgccgttgtgactcaagtgcattcgggacggatggactgccaacatgtgcccctctc
cctcagcctaggctcaggttgtcccactcctatgagcccagcagttcattggtcatcgtg
gaatggaatcacactgagccaccaatcggggtgcggatcgtggattatctcattagccag
gagaaagtgacagagaggacagaccactccaaaatggagacagagacaatgttgagcttt
gtggatgatatcctgtctggggccaagtctccgtgtgtgatgcttggggatatccctgac
ctcctgacctcctccgtcagcatgatcattcgctgcctggagccagacaccacttacatg
tttaggctctgggcagtggacaacacaggccgtcgctccagcccaagtgaggtcaccatc
aagaccccctgccctgctgtggatgatgtcaaagcacaagagattgcagacaagatctac
aacctgttcaatggttacacaagtggcaaggagcagcagacggcctacaatacgctgatg
gatctgggatctcccaccctacaccgtgtgctctaccactacaaccagcgttatgagagc
ttcggagagttcacctggagatgcgaggatgaactggggcctaggaaagctggtctgatt
ctctcccagctggatgacctgagtggctggtgcaggggtcttctccaggagcccaagatt
ggcctgcgcaggatgtccctcaagtacctgtcctgccgctacacagacaccaaggccttt
ggtctcaactgggtggacctgggccaggatgtgcgaaaggcctgcgacgaacagaacctg
ccagtcatgtacaatgattatggggagcccaaagaacgttga
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