Oncorhynchus mykiss (rainbow trout): 110530356
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Entry
110530356 CDS
T07259
Symbol
shhb
Name
(RefSeq) tiggy-winkle hedgehog protein
KO
K11988
sonic hedgehog
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110530356 (shhb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110530356 (shhb)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
omy00536
]
110530356 (shhb)
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C46: hedgehog family
110530356 (shhb)
Glycosaminoglycan binding proteins [BR:
omy00536
]
Heparan sulfate / Heparin
Morphogens
110530356 (shhb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Intein_splicing
Hom_end_hint
VldE
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
110530356
NCBI-ProteinID:
XP_021469018
Ensembl:
ENSOMYG00000011706
UniProt:
A0A060YW61
LinkDB
All DBs
Position
8:complement(65483660..65486476)
Genome browser
AA seq
415 aa
AA seq
DB search
MDVMLILIRIALVGFICLFLASAGLACGPGKGYGKQRHPKKLKPLAYKQFIPNVAEKTLG
ASGKYEGKITRNSERFKDLTPNYNPDIIFKDEENTNADRLMTQRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVNYES
KAHIHCSVKAENSVAAKSGGCFPGSASVLLEDGRSKLVKELEVGDKVLAADIEGNIVSSD
FLMFLDKDPVSKREFYVFETEKPNRKLRLTPAHLVFITSNVTDDDMTAVFASNVKPGQQV
FVVDEAVDHLKAVTVERIYVEEYEGSYAPVTSQGTIIVDHVLASCYAVIEDHKWAHWAFA
PVRLGHALMSFTDLVKKREDIRQRDGIHWYSDILYHIGTLLLDINSFHPLGMSQS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgatgcttatactgataagaattgcgctcgtgggattcatctgcctgttccta
gcatccgctgggttggcctgtggtccaggcaagggatatggaaaacaaagacatccgaaa
aaactaaagcctttggcttacaagcagttcattcccaacgtggcggagaaaacccttggg
gccagtggcaaatacgaagggaagatcacaaggaactctgaaagatttaaagacctgaca
ccaaactacaatcctgacattattttcaaagatgaggaaaacactaatgctgacagactt
atgacacagagatgtaaggacaaactgaactctttggctatttcagtcatgaatcaatgg
ccgggagtgaagctgcgcgtgacagaaggctgggacgaggatggacaccatttcgaagaa
tctttacactatgaaggaagggctgtggatatcaccacctctgacagagataagagcaaa
tatggaatgctatcccggctcgcggtggaggcaggattcgactgggtcaattatgaatcc
aaagcccatattcattgttctgtgaaagcagaaaattcagttgctgcaaagtcgggtggc
tgcttccctggatctgcctcagttctcctcgaggatggtcgaagcaagctggtaaaagaa
ctggaggtgggcgacaaggtgttagcggcagacatagaaggaaatattgtgtccagcgat
ttcctcatgttcttggacaaagatccagtgtcaaaacgcgaattttatgtttttgaaaca
gagaagcccaaccgaaagttaagactgaccccggctcacctggtcttcatcaccagtaac
gttacggatgacgatatgactgcagtgtttgccagtaatgtaaaacctgggcaacaggtg
tttgttgtggatgaggccgtagaccacctgaaggcagtcactgtggaaaggatttacgtg
gaagaatacgagggatcttatgccccagtaacctcacaagggaccatcatagttgaccat
gttttggcgagctgttacgcggtaatcgaggaccacaaatgggcgcactgggcctttgcg
ccagtcaggttggggcacgcgttgatgtccttcacagatctagtcaaaaagcgcgaggac
atacgtcagagagatggaatacactggtactcagacattctataccacatagggacattg
ctgctggacataaactcctttcatcctctaggaatgtcccaaagctga
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