Oncorhynchus mykiss (rainbow trout): 110530374
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Entry
110530374 CDS
T07259
Name
(RefSeq) zinc finger CCHC domain-containing protein 2 isoform X1
KO
K22700
Zinc finger CCHC domain-containing protein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
110530374
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
110530374
NCBI-ProteinID:
XP_036841895
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Position
8:complement(66076814..66096951)
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AA seq
1074 aa
AA seq
DB search
MLKIKIPIRTAEGDHTVEDEQENTDCSSHTIDSVPYCSVRFKHSTGESYRQWQIDKKAVF
EWFGLHLSPAKRIEFMYGLLHMCQPLEIRFLGSCLEDLARKDVHVFRDFEITANCQTDLA
FLKDVSDPVVRSKLLVYLSLLRSGNRECADTLYRALSHIDPALYLNTYHGVPLSPRGGNT
QNVPDQHCPREGGIESGRSVHPSGTPLEAESGSLEHLALLFTMASLHPAFPFYQRDTVRH
QLDNVELVLEERMDCHKRMSFQQKQHALRREDLSPRSTDMGQSACCIPNQLPNRTSSQRE
EVHIDKIVLKTISWNRVSSEYSIEVQWSDSTWTTVTKTHHELGDFLSKRSTEPFEKGLVR
LLAQEDQYEPRDLERTLQEMLLSAPAAFRRRREVCRFLLPHCSHCKCLCPCLSLQGDNTV
PPGKTCKAPEHFKEDCTEPSSQDHDIGSHHLRHQTACSSKRLGQGTRMTKSSQSESQRPA
VHAEHNGVMQRRRKPGIMTCRPDPHQVSRTGLSFLSLAWPLETLNADEKWAFTPEKKSRR
RLGGRRSDGAKGYIPSSFIRPQSTHMTRQGAKPVQNRYGDTWSDSSSTPSSPQHEAHESL
DIEDLDDERDTAESYSDHSIQEKRASDDSRGEVVATVHAIVPVPYREETSYTGSPLSVHP
LSMTVQNGRTMPDRTVMVTPQPGDGSPADGALTGTTSMVPQESIPSQASLGDPERQGHVS
APLSSPQLANLGSSIHLKPQCYMTPTSPESRSTNPHHQPPMSAISVIPLTFHVCPLRPAY
TSTDPASTATLPLPASLPDPSTRTQALAAPTSLPTPTSVTPSSVATVTPAAISQVQATLP
PAIPTHTPGPVASPALTLIHSTAQGDGASCSSSWVAAGQAQTQQQALPPQQQQMSCNSCG
CRGSCGNSHSTAPSPNFSFPPQLGRQVFSNAHLPLFHLPSMCSTGYPSHRSQVQHQSNAT
TQLPFYPPPPHTATPTSTPPPRHSHHMLVTQAGYNLQQMAAAPFNSLYTPMFSSLGLGLG
TGTMKSSANFSCYNCGLSGHYAQDCKQPSMDAGQQGDFRLKHTAAHFFEADQTD
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaattaagattcccattcgaacggcggaaggagaccataccgtcgaagacgag
caggaaaataccgattgcagcagtcacactattgattcggttccatattgtagtgtgagg
ttcaaacattcaacgggggagtcatatcgccagtggcaaattgacaagaaggctgtgttt
gagtggttcggcttgcacctcagcccagcgaagcggatagagtttatgtacggactactt
catatgtgtcaaccacttgagattcgctttttgggatcatgtcttgaggatcttgcacgg
aaagatgtccacgttttccgggactttgagataacagcaaactgtcaaactgacttggcc
ttccttaaggacgttagcgatcctgttgtgcgttccaaactacttgtctacctgtcactt
ttgcgatctggaaacagagaatgtgcggacacactgtatcgtgctttgagccatatagac
ccagcgctgtacttaaatacttatcatggcgttcctttatctccacgtggtgggaacact
cagaatgtacctgatcaacattgccctcgcgagggtggaattgagtctgggagatctgtg
catcccagcgggactccactggaggcagagtcgggttccctggagcacttggcgctgctt
ttcaccatggcctcactacaccctgctttccctttttaccagagggatactgtcagacac
cagttggataatgtggaactggtcttagaggagagaatggattgccacaaacgcatgagt
ttccagcagaagcagcatgcccttcgaagggaggatctcagccccaggagcactgacatg
ggtcagtcggcctgctgtattcccaatcaactccccaacaggacatcatcccagagagaa
gaagttcacattgacaagattgtgctaaagacgatatcttggaaccgagtaagcagtgaa
tacagtattgaggtccagtggtctgactcaacatggaccacagtgaccaagactcaccat
gagctgggtgacttcctgtccaagaggtccactgagccctttgagaagggcctggtgagg
ttactggcccaggaagaccagtatgagcccagggacctggagaggacactacaggagatg
cttctgtcagccccagcagccttcaggcggagacgagaggtctgcaggttcctcctcccc
cactgcagccactgtaagtgtctgtgcccctgtctcagccttcagggagataacacagta
cctcctggaaagacctgtaaggcacctgagcactttaaagaagactgcactgagccatcc
agtcaggaccatgacataggttctcaccacctaaggcatcagacggcgtgcagcagcaag
aggctaggccagggcacacggatgacaaagagcagccagagtgagagccagaggcctgct
gttcacgcagagcacaatggagtgatgcagaggaggaggaaaccaggcatcatgacctgt
aggccagacccacatcaggtcagtcgcactggcctctcctttctctctctggcctggcca
ttagagacgctgaacgcagatgagaaatgggctttcactccagaaaaaaagagcagaaga
agactaggtggaaggagaagtgatggggctaaaggctacatacccagcagcttcatcaga
ccacagtcaacacacatgaccagacagggtgccaagccggtccagaacaggtatggagac
acgtggtccgatagctccagtactccctccagtccccagcacgaggcacatgagagcctg
gatattgaggacctggacgacgagagagacactgctgagagttactcagaccactccatc
caggagaagagggcgagtgatgacagcagaggggaagttgtagctactgtacacgctata
gtccctgtcccctacagagaagagacatcctacactggcagtcccctgagtgtacaccct
ctatcaatgacggtccagaatgggcgaaccatgccagacaggacggtcatggtcactcca
cagccaggggacggttcaccagcagatggggcactgactgggaccacctccatggttcct
caggagtccatcccaagccaagcttccctgggagaccctgagaggcaggggcacgtgtct
gcccccctgagctcacctcagctagccaatttaggatccagcattcacctaaagccccag
tgttatatgacccctaccagcccagagagtagaagcactaacccccatcaccagccccca
atgagcgccatcagtgtcatccccctgaccttccacgtgtgccccctgaggccagcatac
accagcactgacccagcctccaccgccaccctacccctaccagcctctctccctgaccct
agcaccaggacccaagccctggctgcgcccaccagcctacccacccctacctccgtgaca
ccctcctcagtggccactgtcaccccagctgcaatcagccaggttcaggccactctgccc
ccagccatccccactcacacccccggccccgtggccagcccagccctgaccctcatccac
agcacggcccagggagatggtgcctcctgcagcagctcttgggtggcagcagggcaggcc
cagacccagcagcaggccctccctccacagcaacagcagatgagctgcaattcctgtggt
tgccgtggcagctgtggtaatagccactctaccgcccccagccccaacttctccttccct
ccccagctggggcgccaggtcttcagcaatgcccacctccctctcttccacctcccatcc
atgtgcagcactggatatcccagccaccgcagccaggtccaacaccagagcaacgccacc
acccagctaccattctacccccctccacctcacacggccacccccacctccacgccacct
ccacgccactcccaccacatgctggtcacccaggctggttacaacctgcagcagatggca
gcggctcccttcaacagcctctacacgcccatgttctcctcgttgggactgggactgggc
acgggcacgatgaagagcagtgccaacttctcttgctataactgtgggctaagcgggcat
tatgcccaggactgcaaacagccctccatggacgccgggcagcaaggtgactttcggctg
aagcacacggccgcccacttctttgaagcagaccaaactgactga
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